RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 DBHP09172 617 aa16.15■□□□□ 0.18
MCF2L-230ENST00000491028 ACSM4P0C7M7 580 aa16.15■□□□□ 0.18
MCF2L-230ENST00000491028 PTAFRP25105 342 aa16.15■□□□□ 0.18
MCF2L-230ENST00000491028 KIR2DL3P43628 341 aa16.15■□□□□ 0.18
MCF2L-230ENST00000491028 CX3CR1P49238 355 aa16.15■□□□□ 0.18
MCF2L-230ENST00000491028 RGS6P49758 472 aa16.15■□□□□ 0.18
MCF2L-230ENST00000491028 MMP16P51512 607 aa16.15■□□□□ 0.18
MCF2L-230ENST00000491028 PRKXP51817 358 aa16.15■□□□□ 0.18
MCF2L-230ENST00000491028 GBX2P52951 348 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-230ENST00000491028 GALK2Q01415 458 aa16.15■□□□□ 0.18
MCF2L-230ENST00000491028 NAAAQ02083 359 aa16.15■□□□□ 0.18
MCF2L-230ENST00000491028 EMX1Q04741 257 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-230ENST00000491028 SNTB1Q13884 538 aaKnown RBP16.15■□□□□ 0.18
MCF2L-230ENST00000491028 RSPO1Q2MKA7 263 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-230ENST00000491028 ARL9Q6T311 187 aa16.15■□□□□ 0.18
MCF2L-230ENST00000491028 ZNF367Q7RTV3 350 aa16.15■□□□□ 0.18
MCF2L-230ENST00000491028 DMRTC2Q8IXT2 367 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-230ENST00000491028 ACBD4Q8NC06 268 aa16.15■□□□□ 0.18
MCF2L-230ENST00000491028 PELI1Q96FA3 418 aa16.15■□□□□ 0.18
MCF2L-230ENST00000491028 DOK1Q99704 481 aa16.15■□□□□ 0.18
MCF2L-230ENST00000491028 SP140LQ9H930 580 aa16.15■□□□□ 0.18
MCF2L-230ENST00000491028 BABAM2Q9NXR7 383 aa16.15■□□□□ 0.18
MCF2L-230ENST00000491028 R4GMQ9 66 aa16.15■□□□□ 0.18
MCF2L-230ENST00000491028 ACOD1A6NK06 481 aa16.14■□□□□ 0.17
MCF2L-230ENST00000491028 J3QW42 95 aa16.14■□□□□ 0.17
MCF2L-230ENST00000491028 SRSF10O75494 262 aaKnown RBP16.14■□□□□ 0.17
MCF2L-230ENST00000491028 RPSAP08865 295 aaKnown RBP16.14■□□□□ 0.17
MCF2L-230ENST00000491028 PCMT1P22061 227 aa16.14■□□□□ 0.17
MCF2L-230ENST00000491028 CD40P25942 277 aa16.14■□□□□ 0.17
MCF2L-230ENST00000491028 MAP2K4P45985 399 aa16.14■□□□□ 0.17
MCF2L-230ENST00000491028 TAS2R43P59537 309 aa16.14■□□□□ 0.17
MCF2L-230ENST00000491028 BDH1Q02338 343 aa16.14■□□□□ 0.17
MCF2L-230ENST00000491028 ACSM1Q08AH1 577 aa16.14■□□□□ 0.17
MCF2L-230ENST00000491028 SPHARQ15513 63 aa16.14■□□□□ 0.17
MCF2L-230ENST00000491028 ZNF544Q6NX49 715 aa16.14■□□□□ 0.17
MCF2L-230ENST00000491028 FAM222BQ8WU58 562 aa16.14■□□□□ 0.17
MCF2L-230ENST00000491028 SLC7A6Q92536 515 aa16.14■□□□□ 0.17
MCF2L-230ENST00000491028 ESRP2Q9H6T0 727 aaKnown RBP16.14■□□□□ 0.17
MCF2L-230ENST00000491028 VCX3AQ9NNX9 186 aa16.14■□□□□ 0.17
MCF2L-230ENST00000491028 TRIM36Q9NQ86 728 aa16.14■□□□□ 0.17
MCF2L-230ENST00000491028 FLNCQ14315 2725 aa16.14■□□□□ 0.17
MCF2L-230ENST00000491028 IGHV2OR16-5A0A0B4J2B6 119 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 TMEM269A0A1B0GVZ9 245 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 PRSS44E7EML9 344 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 RPP14O95059 124 aaKnown RBP16.13■□□□□ 0.17
MCF2L-230ENST00000491028 CRYAAP02489 173 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 SMIM18P0DKX4 95 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 CCL2P13500 99 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 ZNF35P13682 527 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 CCNOP22674 350 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 SLC6A9P48067 706 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 TGM4P49221 684 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 MED22Q15528 200 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 CCDC58Q4VC31 144 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 BEX5Q5H9J7 111 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 UBE2UQ5VVX9 321 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 FDX2Q6P4F2 183 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 UNQ6126/PRO20091Q6UXV3 157 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 GATAD2BQ8WXI9 593 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 RORBQ92753 470 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 KCNS3Q9BQ31 491 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 C1QTNF5Q9BXJ0 243 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 MRPS26Q9BYN8 205 aaKnown RBP16.13■□□□□ 0.17
MCF2L-230ENST00000491028 ISYNA1Q9NPH2 558 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 FAM206AQ9NX38 181 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 CRIM1Q9NZV1 1036 aa16.13■□□□□ 0.17
MCF2L-230ENST00000491028 EIF3KQ9UBQ5 218 aaKnown RBP16.13■□□□□ 0.17
MCF2L-230ENST00000491028 LOC110117498-PIK3R3F6TDL0 507 aa16.12■□□□□ 0.17
MCF2L-230ENST00000491028 PCSK6P29122 969 aa16.12■□□□□ 0.17
MCF2L-230ENST00000491028 NR1H2P55055 460 aa16.12■□□□□ 0.17
MCF2L-230ENST00000491028 ZNF121P58317 390 aaPredicted RBP16.12■□□□□ 0.17
MCF2L-230ENST00000491028 HGFACQ04756 655 aa16.12■□□□□ 0.17
MCF2L-230ENST00000491028 NCMAPQ5T1S8 102 aa16.12■□□□□ 0.17
MCF2L-230ENST00000491028 COLCA1Q6ZS62 124 aa16.12■□□□□ 0.17
MCF2L-230ENST00000491028 KCTD8Q6ZWB6 473 aa16.12■□□□□ 0.17
MCF2L-230ENST00000491028 PRSS45Q7RTY3 260 aa16.12■□□□□ 0.17
MCF2L-230ENST00000491028 KLBQ86Z14 1044 aa16.12■□□□□ 0.17
MCF2L-230ENST00000491028 C4orf45Q96LM5 186 aa16.12■□□□□ 0.17
MCF2L-230ENST00000491028 OR5M11Q96RB7 305 aa16.12■□□□□ 0.17
MCF2L-230ENST00000491028 TBCCD1Q9NVR7 557 aa16.12■□□□□ 0.17
MCF2L-230ENST00000491028 GRIP1Q9Y3R0 1128 aa16.12■□□□□ 0.17
MCF2L-230ENST00000491028 USP9XQ93008 2570 aaPredicted RBP16.12■□□□□ 0.17
MCF2L-230ENST00000491028 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-230ENST00000491028 DPRXA6NFQ7 191 aa16.11■□□□□ 0.17
MCF2L-230ENST00000491028 GOSR1O95249 250 aa16.11■□□□□ 0.17
MCF2L-230ENST00000491028 LCKP06239 509 aa16.11■□□□□ 0.17
MCF2L-230ENST00000491028 ANXA2P07355 339 aaKnown RBP16.11■□□□□ 0.17
MCF2L-230ENST00000491028 ATP6V1B1P15313 513 aa16.11■□□□□ 0.17
MCF2L-230ENST00000491028 CALCRP30988 508 aa16.11■□□□□ 0.17
MCF2L-230ENST00000491028 PSMB10P40306 273 aa16.11■□□□□ 0.17
MCF2L-230ENST00000491028 CCR9P51686 369 aa16.11■□□□□ 0.17
MCF2L-230ENST00000491028 BSPH1Q075Z2 132 aa16.11■□□□□ 0.17
MCF2L-230ENST00000491028 MFGE8Q08431 387 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-230ENST00000491028 XAF1Q6GPH4 301 aa16.11■□□□□ 0.17
MCF2L-230ENST00000491028 RPL22L1Q6P5R6 122 aaKnown RBP16.11■□□□□ 0.17
MCF2L-230ENST00000491028 MEX3BQ6ZN04 569 aaKnown RBP16.11■□□□□ 0.17
MCF2L-230ENST00000491028 CATSPERDQ86XM0 798 aa16.11■□□□□ 0.17
MCF2L-230ENST00000491028 C1orf174Q8IYL3 243 aa16.11■□□□□ 0.17
MCF2L-230ENST00000491028 PAQR4Q8N4S7 273 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-230ENST00000491028 OR52H1Q8NGJ2 320 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms