RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 KLHL26Q53HC5 615 aa17.34■□□□□ 0.37
SNAPC3-206ENST00000490969 TEX30Q5JUR7 227 aa17.34■□□□□ 0.37
SNAPC3-206ENST00000490969 Q7L0L9 218 aa17.34■□□□□ 0.37
SNAPC3-206ENST00000490969 SLC25A44Q96H78 314 aaPredicted RBP17.34■□□□□ 0.37
SNAPC3-206ENST00000490969 SPACA7Q96KW9 195 aa17.34■□□□□ 0.37
SNAPC3-206ENST00000490969 VSTM2LQ96N03 204 aa17.34■□□□□ 0.37
SNAPC3-206ENST00000490969 NAA11Q9BSU3 229 aaPredicted RBP17.34■□□□□ 0.37
SNAPC3-206ENST00000490969 OR2S2Q9NQN1 319 aa17.34■□□□□ 0.37
SNAPC3-206ENST00000490969 GHRLQ9UBU3 117 aa17.34■□□□□ 0.37
SNAPC3-206ENST00000490969 RPH3AQ9Y2J0 694 aaPredicted RBP17.34■□□□□ 0.37
SNAPC3-206ENST00000490969 WIPF3A6NGB9 483 aa17.33■□□□□ 0.36
SNAPC3-206ENST00000490969 FSTP19883 344 aa17.33■□□□□ 0.36
SNAPC3-206ENST00000490969 CPT2P23786 658 aa17.33■□□□□ 0.36
SNAPC3-206ENST00000490969 RPS21P63220 83 aaKnown RBP17.33■□□□□ 0.36
SNAPC3-206ENST00000490969 MFGE8Q08431 387 aaPredicted RBP17.33■□□□□ 0.36
SNAPC3-206ENST00000490969 FABP9Q0Z7S8 132 aa17.33■□□□□ 0.36
SNAPC3-206ENST00000490969 CCINQ13939 588 aa17.33■□□□□ 0.36
SNAPC3-206ENST00000490969 RNF212Q495C1 297 aa17.33■□□□□ 0.36
SNAPC3-206ENST00000490969 AWAT2Q6E213 333 aa17.33■□□□□ 0.36
SNAPC3-206ENST00000490969 ZNF679Q8IYX0 411 aa17.33■□□□□ 0.36
SNAPC3-206ENST00000490969 ZC3H10Q96K80 434 aaKnown RBP17.33■□□□□ 0.36
SNAPC3-206ENST00000490969 FN3KRPQ9HA64 309 aa17.33■□□□□ 0.36
SNAPC3-206ENST00000490969 METTL1Q9UBP6 276 aaKnown RBP17.33■□□□□ 0.36
SNAPC3-206ENST00000490969 WIF1Q9Y5W5 379 aa17.33■□□□□ 0.36
SNAPC3-206ENST00000490969 A0A1W2PPE3 182 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 HRKO00198 91 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 TNFSF14O43557 240 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 NUDT21O43809 227 aaKnown RBP17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 CD5P06127 495 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 HRH1P35367 487 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 SPOCK1Q08629 439 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 SGCGQ13326 291 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 SGCAQ16586 387 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 ZNF260Q3ZCT1 412 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 ATG4DQ86TL0 474 aaPredicted RBP17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 ZNF561Q8N587 486 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 EDARADDQ8WWZ3 215 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 ROBO4Q8WZ75 1007 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 RERGQ96A58 199 aaPredicted RBP17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 FOXN4Q96NZ1 517 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 IGHV2-70P01814 119 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 HLA-DQA2P01906 255 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 PNMTP11086 282 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 RCC1P18754 421 aaPredicted RBP17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 AGAP20933 346 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 DRD1P21728 446 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 LPAR6P43657 344 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 LSSP48449 732 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 FRMD1Q8N878 549 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 G6PC3Q9BUM1 346 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 ASH2LQ9UBL3 628 aa17.32■□□□□ 0.36
SNAPC3-206ENST00000490969 SDK1Q7Z5N4 2213 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 TRBV23OR9-2A0A075B6M9 112 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 C9JQL5 133 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 ST6GAL1P15907 406 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 AKR1C3P42330 323 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 KIR2DS3Q14952 304 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 FAM76BQ5HYJ3 339 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 WBP2NLQ6ICG8 309 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 TAF8Q7Z7C8 310 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 GATSQ8NAP1 163 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 ASB17Q8WXJ9 295 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 PTX4Q96A99 478 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 CMBLQ96DG6 245 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 ELF4Q99607 663 aaPredicted RBP17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 ZFYVE21Q9BQ24 234 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 Q9N2J8 555 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 TRBV23-1A0A0A0MS06 115 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 TCRBV21S2A2A0A5A6 115 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 MFNGO00587 321 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 CD80P33681 288 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 HGFACQ04756 655 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 EGR4Q05215 589 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 DHRS11Q6UWP2 260 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 CCNL2Q96S94 520 aaPredicted RBP17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 SULT4A1Q9BR01 284 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 FGF22Q9HCT0 170 aa17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 GDF2Q9UK05 429 aaPredicted RBP17.31■□□□□ 0.36
SNAPC3-206ENST00000490969 METTL21EPA6NDL7 271 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 RAB27BO00194 218 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 AGPAT2O15120 278 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 MED6O75586 246 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 MT-ND4LP03901 98 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 FCGR3AP08637 254 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 GABRG2P18507 467 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 CENPAP49450 140 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 TMEM244Q5VVB8 128 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 BHLHE23Q8NDY6 225 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 OR10G6Q8NH81 332 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 FAM3CQ92520 227 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 NECAB3Q96P71 396 aaPredicted RBP17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 OR5AC2Q9NZP5 309 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 CACFD1Q9UGQ2 172 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 B9D1Q9UPM9 204 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 MEGF11A6BM72 1044 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 FAM157AC9JC47 383 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 GATCO43716 136 aaKnown RBP17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 LRP3O75074 770 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 DNASE1L1P49184 302 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 CCR4P51679 360 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms