RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 ZDHHC22Q8N966 263 aa17.63■□□□□ 0.41
SYNE4-205ENST00000490730 POP5Q969H6 163 aaKnown RBP17.63■□□□□ 0.41
SYNE4-205ENST00000490730 PYURFQ96I23 114 aa17.63■□□□□ 0.41
SYNE4-205ENST00000490730 PITX2Q99697 317 aa17.63■□□□□ 0.41
SYNE4-205ENST00000490730 FUZQ9BT04 418 aa17.63■□□□□ 0.41
SYNE4-205ENST00000490730 FN3KQ9H479 309 aa17.63■□□□□ 0.41
SYNE4-205ENST00000490730 GORASP2Q9H8Y8 452 aa17.63■□□□□ 0.41
SYNE4-205ENST00000490730 NTN4Q9HB63 628 aa17.63■□□□□ 0.41
SYNE4-205ENST00000490730 DDX28Q9NUL7 540 aaKnown RBP17.63■□□□□ 0.41
SYNE4-205ENST00000490730 MAGEL2Q9UJ55 1249 aa17.63■□□□□ 0.41
SYNE4-205ENST00000490730 CEACAM18A8MTB9 384 aa17.62■□□□□ 0.41
SYNE4-205ENST00000490730 F5H5K5 113 aa17.62■□□□□ 0.41
SYNE4-205ENST00000490730 F5H5P2 479 aa17.62■□□□□ 0.41
SYNE4-205ENST00000490730 HIST1H1CP16403 213 aaKnown RBP17.62■□□□□ 0.41
SYNE4-205ENST00000490730 MSX2P35548 267 aaPredicted RBP17.62■□□□□ 0.41
SYNE4-205ENST00000490730 PRSS12P56730 875 aa17.62■□□□□ 0.41
SYNE4-205ENST00000490730 HIST1H3AP68431 136 aa17.62■□□□□ 0.41
SYNE4-205ENST00000490730 COX10Q12887 443 aa17.62■□□□□ 0.41
SYNE4-205ENST00000490730 HIST2H3PS2Q5TEC6 136 aa17.62■□□□□ 0.41
SYNE4-205ENST00000490730 CFAP77Q6ZQR2 320 aa17.62■□□□□ 0.41
SYNE4-205ENST00000490730 HIST2H3AQ71DI3 136 aa17.62■□□□□ 0.41
SYNE4-205ENST00000490730 MOGAT3Q86VF5 341 aa17.62■□□□□ 0.41
SYNE4-205ENST00000490730 OR2AJ1Q8NGZ0 328 aa17.62■□□□□ 0.41
SYNE4-205ENST00000490730 DVL3Q92997 716 aaPredicted RBP17.62■□□□□ 0.41
SYNE4-205ENST00000490730 CDADC1Q9BWV3 514 aa17.62■□□□□ 0.41
SYNE4-205ENST00000490730 HCAR1Q9BXC0 346 aa17.62■□□□□ 0.41
SYNE4-205ENST00000490730 NUP50Q9UKX7 468 aa17.62■□□□□ 0.41
SYNE4-205ENST00000490730 INSIG2Q9Y5U4 225 aa17.62■□□□□ 0.41
SYNE4-205ENST00000490730 F5H0A9 414 aaPredicted RBP17.61■□□□□ 0.41
SYNE4-205ENST00000490730 IFNL4K9M1U5 179 aa17.61■□□□□ 0.41
SYNE4-205ENST00000490730 RPS2P15880 293 aaKnown RBP17.61■□□□□ 0.41
SYNE4-205ENST00000490730 ZNF12P17014 697 aa17.61■□□□□ 0.41
SYNE4-205ENST00000490730 FPR3P25089 353 aa17.61■□□□□ 0.41
SYNE4-205ENST00000490730 UBA52P62987 128 aaKnown RBP17.61■□□□□ 0.41
SYNE4-205ENST00000490730 SDR9C7Q8NEX9 313 aa17.61■□□□□ 0.41
SYNE4-205ENST00000490730 SLC26A10Q8NG04 563 aa17.61■□□□□ 0.41
SYNE4-205ENST00000490730 NSRP1Q9H0G5 558 aaKnown RBP17.61■□□□□ 0.41
SYNE4-205ENST00000490730 ZNF69Q9UC07 566 aa17.61■□□□□ 0.41
SYNE4-205ENST00000490730 TMCC3Q9ULS5 477 aa17.61■□□□□ 0.41
SYNE4-205ENST00000490730 POLR3KQ9Y2Y1 108 aaPredicted RBP17.61■□□□□ 0.41
SYNE4-205ENST00000490730 LRRC30A6NM36 301 aa17.6■□□□□ 0.41
SYNE4-205ENST00000490730 A8MXK9 166 aa17.6■□□□□ 0.41
SYNE4-205ENST00000490730 MLNRO43193 412 aa17.6■□□□□ 0.41
SYNE4-205ENST00000490730 SEMG1P04279 462 aa17.6■□□□□ 0.41
SYNE4-205ENST00000490730 HLA-DPB1P04440 258 aa17.6■□□□□ 0.41
SYNE4-205ENST00000490730 FABP3P05413 133 aa17.6■□□□□ 0.41
SYNE4-205ENST00000490730 RRM2P31350 389 aa17.6■□□□□ 0.41
SYNE4-205ENST00000490730 IFNGR2P38484 337 aa17.6■□□□□ 0.41
SYNE4-205ENST00000490730 SLC36A3Q495N2 470 aa17.6■□□□□ 0.41
SYNE4-205ENST00000490730 SLC18B1Q6NT16 456 aa17.6■□□□□ 0.41
SYNE4-205ENST00000490730 ZMYND19Q96E35 227 aaPredicted RBP17.6■□□□□ 0.41
SYNE4-205ENST00000490730 NSMCE2Q96MF7 247 aa17.6■□□□□ 0.41
SYNE4-205ENST00000490730 DUX5Q96PT3 197 aa17.6■□□□□ 0.41
SYNE4-205ENST00000490730 ATF6BQ99941 703 aa17.6■□□□□ 0.41
SYNE4-205ENST00000490730 SLC30A2Q9BRI3 323 aa17.6■□□□□ 0.41
SYNE4-205ENST00000490730 TMEM100Q9NV29 134 aa17.6■□□□□ 0.41
SYNE4-205ENST00000490730 LRCH1Q9Y2L9 728 aa17.6■□□□□ 0.41
SYNE4-205ENST00000490730 OR6C68A6NDL8 312 aa17.59■□□□□ 0.41
SYNE4-205ENST00000490730 IQCF6A8MYZ5 107 aa17.59■□□□□ 0.41
SYNE4-205ENST00000490730 ARPC2O15144 300 aa17.59■□□□□ 0.41
SYNE4-205ENST00000490730 ARPC3O15145 178 aa17.59■□□□□ 0.41
SYNE4-205ENST00000490730 LCATP04180 440 aa17.59■□□□□ 0.41
SYNE4-205ENST00000490730 SELEP16581 610 aa17.59■□□□□ 0.41
SYNE4-205ENST00000490730 MALLQ13021 153 aa17.59■□□□□ 0.41
SYNE4-205ENST00000490730 SAMD4BQ5PRF9 694 aaKnown RBP17.59■□□□□ 0.41
SYNE4-205ENST00000490730 CLEC12AQ5QGZ9 265 aa17.59■□□□□ 0.41
SYNE4-205ENST00000490730 SLC35F1Q5T1Q4 408 aa17.59■□□□□ 0.41
SYNE4-205ENST00000490730 CPLX4Q7Z7G2 160 aa17.59■□□□□ 0.41
SYNE4-205ENST00000490730 SSBP3Q9BWW4 388 aaPredicted RBP17.59■□□□□ 0.41
SYNE4-205ENST00000490730 IGHV3OR16-10A0A075B7F0 116 aa17.58■□□□□ 0.4
SYNE4-205ENST00000490730 WNT2P09544 360 aa17.58■□□□□ 0.4
SYNE4-205ENST00000490730 ACSM4P0C7M7 580 aa17.58■□□□□ 0.4
SYNE4-205ENST00000490730 HSD17B1P14061 328 aa17.58■□□□□ 0.4
SYNE4-205ENST00000490730 GNB2P62879 340 aa17.58■□□□□ 0.4
SYNE4-205ENST00000490730 TRAP1Q12931 704 aaKnown RBP17.58■□□□□ 0.4
SYNE4-205ENST00000490730 ECH1Q13011 328 aa17.58■□□□□ 0.4
SYNE4-205ENST00000490730 RSPO1Q2MKA7 263 aaPredicted RBP17.58■□□□□ 0.4
SYNE4-205ENST00000490730 AWAT1Q58HT5 328 aa17.58■□□□□ 0.4
SYNE4-205ENST00000490730 KLF17Q5JT82 389 aaPredicted RBP17.58■□□□□ 0.4
SYNE4-205ENST00000490730 FAM201AQ5SY85 155 aa17.58■□□□□ 0.4
SYNE4-205ENST00000490730 KLBQ86Z14 1044 aa17.58■□□□□ 0.4
SYNE4-205ENST00000490730 BCL6BQ8N143 479 aaPredicted RBP17.58■□□□□ 0.4
SYNE4-205ENST00000490730 OR52E2Q8NGJ4 325 aa17.58■□□□□ 0.4
SYNE4-205ENST00000490730 GNPDA2Q8TDQ7 276 aa17.58■□□□□ 0.4
SYNE4-205ENST00000490730 CDRT15Q96T59 188 aa17.58■□□□□ 0.4
SYNE4-205ENST00000490730 C1QTNF5Q9BXJ0 243 aa17.58■□□□□ 0.4
SYNE4-205ENST00000490730 TMEM165Q9HC07 324 aa17.58■□□□□ 0.4
SYNE4-205ENST00000490730 DNAJC9-AS1A6NH13 148 aa17.57■□□□□ 0.4
SYNE4-205ENST00000490730 SNX3O60493 162 aa17.57■□□□□ 0.4
SYNE4-205ENST00000490730 IRF2P14316 349 aa17.57■□□□□ 0.4
SYNE4-205ENST00000490730 GSSP48637 474 aa17.57■□□□□ 0.4
SYNE4-205ENST00000490730 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.57■□□□□ 0.4
SYNE4-205ENST00000490730 GK2Q14410 553 aaPredicted RBP17.57■□□□□ 0.4
SYNE4-205ENST00000490730 BTNL3Q6UXE8 466 aa17.57■□□□□ 0.4
SYNE4-205ENST00000490730 ZNF620Q6ZNG0 422 aa17.57■□□□□ 0.4
SYNE4-205ENST00000490730 DOK3Q7L591 496 aa17.57■□□□□ 0.4
SYNE4-205ENST00000490730 NAA40Q86UY6 237 aa17.57■□□□□ 0.4
SYNE4-205ENST00000490730 ZBTB46Q86UZ6 589 aa17.57■□□□□ 0.4
SYNE4-205ENST00000490730 C1orf87Q8N0U7 546 aa17.57■□□□□ 0.4
SYNE4-205ENST00000490730 PGAM4Q8N0Y7 254 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms