RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 HTR3EA5X5Y0 456 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 C5orf63A6NC05 138 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 C3orf80F5H4A9 247 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 RER1O15258 196 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 FAM20BO75063 409 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 PRB2P02812 416 aaPredicted RBP11.55□□□□□ -0.56
VARS-227ENST00000489979 LIPFP07098 398 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 FPR3P25089 353 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 PRSS12P56730 875 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 ST3GAL3Q11203 375 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 MAB21L1Q13394 359 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 MESTQ5EB52 335 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 CLEC12AQ5QGZ9 265 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 METTL11BQ5VVY1 283 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 PRAMEF6Q5VXH4 476 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 GDPGP1Q6ZNW5 385 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 OAFQ86UD1 273 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 NRMQ8IXM6 262 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 PDZD9Q8IXQ8 264 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 SCCPDHQ8NBX0 429 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 OR13C2Q8NGS9 318 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 Q8TCH9 128 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 APOBEC3DQ96AK3 386 aaPredicted RBP11.55□□□□□ -0.56
VARS-227ENST00000489979 TLCD1Q96CP7 247 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 Q96M85 177 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 SIRPDQ9H106 197 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 C16orf95Q9H693 158 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 WDR76Q9H967 626 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 UFSP2Q9NUQ7 469 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 GRHPRQ9UBQ7 328 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 A4GNTQ9UNA3 340 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 ADAM18Q9Y3Q7 739 aa11.55□□□□□ -0.56
VARS-227ENST00000489979 A0A1B0GWJ7 208 aa11.54□□□□□ -0.56
VARS-227ENST00000489979 PRSS37A4D1T9 235 aa11.54□□□□□ -0.56
VARS-227ENST00000489979 EFCAB9A8MZ26 197 aa11.54□□□□□ -0.56
VARS-227ENST00000489979 XKRYO14609 159 aa11.54□□□□□ -0.56
VARS-227ENST00000489979 CD14P08571 375 aa11.54□□□□□ -0.56
VARS-227ENST00000489979 RPL4P36578 427 aaKnown RBP11.54□□□□□ -0.56
VARS-227ENST00000489979 LSM6P62312 80 aaKnown RBP11.54□□□□□ -0.56
VARS-227ENST00000489979 ARF6P62330 175 aa11.54□□□□□ -0.56
VARS-227ENST00000489979 SFRP4Q6FHJ7 346 aaPredicted RBP11.54□□□□□ -0.56
VARS-227ENST00000489979 Q6ZPA2 131 aa11.54□□□□□ -0.56
VARS-227ENST00000489979 PNLDC1Q8NA58 520 aaKnown RBP11.54□□□□□ -0.56
VARS-227ENST00000489979 ERGIC1Q969X5 290 aa11.54□□□□□ -0.56
VARS-227ENST00000489979 DPAGT1Q9H3H5 408 aa11.54□□□□□ -0.56
VARS-227ENST00000489979 RERGLQ9H628 205 aa11.54□□□□□ -0.56
VARS-227ENST00000489979 SMURF1Q9HCE7 757 aa11.54□□□□□ -0.56
VARS-227ENST00000489979 ATPIF1Q9UII2 106 aa11.54□□□□□ -0.56
VARS-227ENST00000489979 COA3Q9Y2R0 106 aaPredicted RBP11.54□□□□□ -0.56
VARS-227ENST00000489979 ELOVL7A1L3X0 281 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 PIN1P1O15428 100 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 AHCYL1O43865 530 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 SLC16A7O60669 478 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 KHDRBS3O75525 346 aaKnown RBP11.53□□□□□ -0.56
VARS-227ENST00000489979 CD200P41217 278 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 SLC9A3P48764 834 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 RAD23AP54725 363 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 PRKCDQ05655 676 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 EGR3Q06889 387 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 MPPED2Q15777 294 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 KCNJ8Q15842 424 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 ANKDD1AQ495B1 522 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 DHRS7BQ6IAN0 325 aaPredicted RBP11.53□□□□□ -0.56
VARS-227ENST00000489979 NANOGP8Q6NSW7 305 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 CALHM3Q86XJ0 350 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 GLB1L2Q8IW92 636 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 CELF2-AS1Q8N7Q2 184 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 BOLLQ8N9W6 283 aaKnown RBP11.53□□□□□ -0.56
VARS-227ENST00000489979 LRTOMTQ8WZ04 291 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 PRRC1Q96M27 445 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 ZNF570Q96NI8 536 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 ECSITQ9BQ95 431 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 HCAR1Q9BXC0 346 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 RASSF4Q9H2L5 321 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 RHCGQ9UBD6 479 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 RAB21Q9UL25 225 aa11.53□□□□□ -0.56
VARS-227ENST00000489979 RYR3Q15413 4870 aa11.52□□□□□ -0.56
VARS-227ENST00000489979 ZNF816-ZNF321PA0A0X1KG74 233 aa11.52□□□□□ -0.57
VARS-227ENST00000489979 LGALS8O00214 317 aa11.52□□□□□ -0.57
VARS-227ENST00000489979 IMPA2O14732 288 aa11.52□□□□□ -0.57
VARS-227ENST00000489979 ADAM20O43506 726 aa11.52□□□□□ -0.57
VARS-227ENST00000489979 IFNA14P01570 189 aa11.52□□□□□ -0.57
VARS-227ENST00000489979 ZNF26P17031 533 aaPredicted RBP11.52□□□□□ -0.57
VARS-227ENST00000489979 IFNA8P32881 189 aa11.52□□□□□ -0.57
VARS-227ENST00000489979 YAP1P46937 504 aaKnown RBP11.52□□□□□ -0.57
VARS-227ENST00000489979 COX10Q12887 443 aa11.52□□□□□ -0.57
VARS-227ENST00000489979 FAM189A2Q15884 450 aa11.52□□□□□ -0.57
VARS-227ENST00000489979 CYBRD1Q53TN4 286 aa11.52□□□□□ -0.57
VARS-227ENST00000489979 RABL3Q5HYI8 236 aa11.52□□□□□ -0.57
VARS-227ENST00000489979 BEND6Q5SZJ8 279 aaPredicted RBP11.52□□□□□ -0.57
VARS-227ENST00000489979 KPRPQ5T749 579 aaPredicted RBP11.52□□□□□ -0.57
VARS-227ENST00000489979 SAMD5Q5TGI4 173 aa11.52□□□□□ -0.57
VARS-227ENST00000489979 FAM122BQ7Z309 247 aa11.52□□□□□ -0.57
VARS-227ENST00000489979 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.52□□□□□ -0.57
VARS-227ENST00000489979 PIP4P2Q8N4L2 257 aa11.52□□□□□ -0.57
VARS-227ENST00000489979 TPD52L3Q96J77 140 aa11.52□□□□□ -0.57
VARS-227ENST00000489979 COQ7Q99807 217 aa11.52□□□□□ -0.57
VARS-227ENST00000489979 SYT4Q9H2B2 425 aa11.52□□□□□ -0.57
VARS-227ENST00000489979 TMBIM4Q9HC24 238 aa11.52□□□□□ -0.57
VARS-227ENST00000489979 RNF7Q9UBF6 113 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms