RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 DCDP81605 110 aaKnown RBP13.97□□□□□ -0.17
BRD9-208ENST00000489816 AWAT2Q6E213 333 aa13.97□□□□□ -0.17
BRD9-208ENST00000489816 TMEM71Q6P5X7 295 aa13.97□□□□□ -0.17
BRD9-208ENST00000489816 ZNF584Q8IVC4 421 aa13.97□□□□□ -0.17
BRD9-208ENST00000489816 TMEM104Q8NE00 496 aa13.97□□□□□ -0.17
BRD9-208ENST00000489816 ZNF768Q9H5H4 540 aaKnown RBP13.97□□□□□ -0.17
BRD9-208ENST00000489816 GDF2Q9UK05 429 aaPredicted RBP13.97□□□□□ -0.17
BRD9-208ENST00000489816 SNRPGP15A8MWD9 76 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 OR2A4O95047 310 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 HLA-AP01891 365 aaKnown RBP13.96□□□□□ -0.17
BRD9-208ENST00000489816 IL5P05113 134 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 PPP3CBP16298 524 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 S100A11P31949 105 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 ARPC4P59998 168 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 UNC119Q13432 240 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 SGCAQ16586 387 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 ATPAF1Q5TC12 328 aaPredicted RBP13.96□□□□□ -0.17
BRD9-208ENST00000489816 LRRC18Q8N456 261 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 PAQR4Q8N4S7 273 aaPredicted RBP13.96□□□□□ -0.17
BRD9-208ENST00000489816 MFSD8Q8NHS3 518 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 POC1BQ8TC44 478 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 C15orf40Q8WUR7 153 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 MAFIPQ8WZ33 124 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 OR2A7Q96R45 310 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 DEFB126Q9BYW3 111 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 MS4A7Q9GZW8 240 aaPredicted RBP13.96□□□□□ -0.17
BRD9-208ENST00000489816 MFFQ9GZY8 342 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 CHRNA10Q9GZZ6 450 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 PTTG3PQ9NZH4 202 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 KCNN3Q9UGI6 736 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 SRSF10O75494 262 aaKnown RBP13.96□□□□□ -0.17
BRD9-208ENST00000489816 PMP2P02689 132 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 IGFBP3P17936 291 aaPredicted RBP13.96□□□□□ -0.17
BRD9-208ENST00000489816 HOXD11P31277 338 aaPredicted RBP13.96□□□□□ -0.17
BRD9-208ENST00000489816 TAS2R19P59542 299 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 SIGIRRQ6IA17 410 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 TMEM81Q6P7N7 255 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 ZNF275Q9NSD4 429 aaPredicted RBP13.96□□□□□ -0.17
BRD9-208ENST00000489816 SPEF1Q9Y4P9 236 aa13.96□□□□□ -0.17
BRD9-208ENST00000489816 IGHV5-10-1A0A0J9YXX1 117 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 PATE3B3GLJ2 98 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 MPIG6BO95866 241 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 F10P00742 488 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 FOSL2P15408 326 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 BDKRB2P30411 391 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 APOBEC1P41238 236 aaKnown RBP13.95□□□□□ -0.18
BRD9-208ENST00000489816 ACTBP60709 375 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 ACTG1P63261 375 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 CLLU1Q5K131 121 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 DNM1P34Q6PK57 102 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 UEVLDQ8IX04 471 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 STEAP2Q8NFT2 490 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 TMEM41AQ96HV5 264 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 CCDC74BQ96LY2 380 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 SDHAF3Q9NRP4 125 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 OR6C76A6NM76 312 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 F5H5K5 113 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 RAB27BO00194 218 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 VSIG8P0DPA2 414 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 HRH1P35367 487 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 DHRS2Q13268 280 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 WDR74Q6RFH5 385 aaPredicted RBP13.95□□□□□ -0.18
BRD9-208ENST00000489816 FAM57BQ71RH2 274 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 CPEB2Q7Z5Q1 589 aaKnown RBP13.95□□□□□ -0.18
BRD9-208ENST00000489816 C12orf45Q8N5I9 185 aaPredicted RBP13.95□□□□□ -0.18
BRD9-208ENST00000489816 OR13C8Q8NGS7 320 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 OR10K1Q8NGX5 313 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 PNPLA2Q96AD5 504 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 LIN37Q96GY3 246 aaPredicted RBP13.95□□□□□ -0.18
BRD9-208ENST00000489816 C1orf198Q9H425 327 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 LHFPL6Q9Y693 200 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 A6NIZ1 184 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 RAP1BP61224 184 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 RAP1AP62834 184 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 CLPPQ16740 277 aaPredicted RBP13.95□□□□□ -0.18
BRD9-208ENST00000489816 PXDC1Q5TGL8 231 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 TMEM244Q5VVB8 128 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 ZNF704Q6ZNC4 412 aaPredicted RBP13.95□□□□□ -0.18
BRD9-208ENST00000489816 DNM1P46Q6ZS02 220 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 ZNF454Q8N9F8 522 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 ST8SIA1Q92185 356 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 GPER1Q99527 375 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 SPSB2Q99619 263 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 POTEKPQ9BYX7 375 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 GPR84Q9NQS5 396 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 FAM206AQ9NX38 181 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 SRPK3Q9UPE1 567 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 CPAMD8Q8IZJ3 1885 aa13.95□□□□□ -0.18
BRD9-208ENST00000489816 EEF1E1-BLOC1S5C9J1V9 151 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 E9PLN8 166 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 QDPRP09417 244 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 SLC6A9P48067 706 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 PLPPR5Q32ZL2 321 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 RNASE10Q5GAN6 216 aaKnown RBP13.94□□□□□ -0.18
BRD9-208ENST00000489816 BEST3Q8N1M1 668 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 SPEM1Q8N4L4 309 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 OR4K17Q8NGC6 315 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 OR2AJ1Q8NGZ0 328 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 RNF133Q8WVZ7 376 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 ST8SIA4Q92187 359 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms