RNA–Protein interactions for RNA: ENST00000488964.5

CYTH3-209, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-209ENST00000488964 ZNF362Q5T0B9 420 aaPredicted RBP12.88□□□□□ -0.35
CYTH3-209ENST00000488964 LCN1P1Q5VSP4 162 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 CYB5R2Q6BCY4 276 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 FAHD1Q6P587 224 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 DRAM2Q6UX65 266 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 Q71RC1 249 aaPredicted RBP12.88□□□□□ -0.35
CYTH3-209ENST00000488964 DCXRQ7Z4W1 244 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 ERI1Q8IV48 349 aaKnown RBP12.88□□□□□ -0.35
CYTH3-209ENST00000488964 SLC7A6Q92536 515 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 ZNF799Q96GE5 643 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 TOR3AQ9H497 397 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 PURGQ9UJV8 347 aaKnown RBP12.88□□□□□ -0.35
CYTH3-209ENST00000488964 NOP16Q9Y3C1 178 aaKnown RBP12.88□□□□□ -0.35
CYTH3-209ENST00000488964 ORC6Q9Y5N6 252 aa12.88□□□□□ -0.35
CYTH3-209ENST00000488964 IGHV1-69-2A0A0G2JMI3 117 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 FAM183AA6NL82 134 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 VWC2LB2RUY7 222 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 CLDN25C9JDP6 229 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 HPXP02790 462 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 LCATP04180 440 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 ACSM4P0C7M7 580 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 KITLGP21583 273 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 HSD11B1P28845 292 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 MAGEB1P43366 347 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 ACTR3P61158 418 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 CCL8P80075 99 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 PSG7Q13046 419 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 PLBD1Q6P4A8 553 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 FBXW12Q6X9E4 464 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 MRPL21Q7Z2W9 205 aaKnown RBP12.87□□□□□ -0.35
CYTH3-209ENST00000488964 AMIGO2Q86SJ2 522 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 PEG10Q86TG7 708 aaKnown RBP12.87□□□□□ -0.35
CYTH3-209ENST00000488964 ZNF511Q8NB15 262 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 HAVCR1Q96D42 359 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 CMBLQ96DG6 245 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 ZNF582Q96NG8 517 aaPredicted RBP12.87□□□□□ -0.35
CYTH3-209ENST00000488964 C1QTNF5Q9BXJ0 243 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 GABARAPL1Q9H0R8 117 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 OPA3Q9H6K4 179 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 NTN4Q9HB63 628 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 CENPMQ9NSP4 180 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 DDX28Q9NUL7 540 aaKnown RBP12.87□□□□□ -0.35
CYTH3-209ENST00000488964 TVP23BQ9NYZ1 205 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 PTTG3PQ9NZH4 202 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 STARD10Q9Y365 291 aa12.87□□□□□ -0.35
CYTH3-209ENST00000488964 PPIHO43447 177 aaKnown RBP12.86□□□□□ -0.35
CYTH3-209ENST00000488964 IGHV1-46P01743 117 aa12.86□□□□□ -0.35
CYTH3-209ENST00000488964 ADH4P08319 380 aa12.86□□□□□ -0.35
CYTH3-209ENST00000488964 CLUP10909 449 aa12.86□□□□□ -0.35
CYTH3-209ENST00000488964 TNFRSF1AP19438 455 aa12.86□□□□□ -0.35
CYTH3-209ENST00000488964 IGFBP5P24593 272 aa12.86□□□□□ -0.35
CYTH3-209ENST00000488964 MMP15P51511 669 aa12.86□□□□□ -0.35
CYTH3-209ENST00000488964 TNFAIP6P98066 277 aaPredicted RBP12.86□□□□□ -0.35
CYTH3-209ENST00000488964 RIN1Q13671 783 aa12.86□□□□□ -0.35
CYTH3-209ENST00000488964 EIF2B1Q14232 305 aaKnown RBP12.86□□□□□ -0.35
CYTH3-209ENST00000488964 ACSM5Q6NUN0 579 aa12.86□□□□□ -0.35
CYTH3-209ENST00000488964 USP51Q70EK9 711 aa12.86□□□□□ -0.35
CYTH3-209ENST00000488964 CXXC5Q7LFL8 322 aaKnown RBP12.86□□□□□ -0.35
CYTH3-209ENST00000488964 ZNF454Q8N9F8 522 aa12.86□□□□□ -0.35
CYTH3-209ENST00000488964 LRTOMTQ8WZ04 291 aa12.86□□□□□ -0.35
CYTH3-209ENST00000488964 HPS1Q92902 700 aa12.86□□□□□ -0.35
CYTH3-209ENST00000488964 SLAMF6Q96DU3 332 aa12.86□□□□□ -0.35
CYTH3-209ENST00000488964 RBM4BQ9BQ04 359 aaKnown RBP12.86□□□□□ -0.35
CYTH3-209ENST00000488964 WDR76Q9H967 626 aa12.86□□□□□ -0.35
CYTH3-209ENST00000488964 YAE1D1Q9NRH1 226 aa12.86□□□□□ -0.35
CYTH3-209ENST00000488964 H2AFY2Q9P0M6 372 aaPredicted RBP12.86□□□□□ -0.35
CYTH3-209ENST00000488964 SETD2Q9BYW2 2564 aaPredicted RBP12.85□□□□□ -0.35
CYTH3-209ENST00000488964 A8MV72 311 aaPredicted RBP12.85□□□□□ -0.35
CYTH3-209ENST00000488964 CD55P08174 381 aa12.85□□□□□ -0.35
CYTH3-209ENST00000488964 CRYBB2P43320 205 aa12.85□□□□□ -0.35
CYTH3-209ENST00000488964 DAPP51397 102 aa12.85□□□□□ -0.35
CYTH3-209ENST00000488964 RAD23AP54725 363 aa12.85□□□□□ -0.35
CYTH3-209ENST00000488964 KPNB1Q14974 876 aaKnown RBP12.85□□□□□ -0.35
CYTH3-209ENST00000488964 PCK2Q16822 640 aa12.85□□□□□ -0.35
CYTH3-209ENST00000488964 KRTAP27-1Q3LI81 207 aa12.85□□□□□ -0.35
CYTH3-209ENST00000488964 PGAP1Q75T13 922 aa12.85□□□□□ -0.35
CYTH3-209ENST00000488964 RHOUQ7L0Q8 258 aa12.85□□□□□ -0.35
CYTH3-209ENST00000488964 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.85□□□□□ -0.35
CYTH3-209ENST00000488964 CPOQ8IVL8 374 aa12.85□□□□□ -0.35
CYTH3-209ENST00000488964 ZNF283Q8N7M2 679 aa12.85□□□□□ -0.35
CYTH3-209ENST00000488964 OR2Z1Q8NG97 314 aa12.85□□□□□ -0.35
CYTH3-209ENST00000488964 OR13G1Q8NGZ3 307 aa12.85□□□□□ -0.35
CYTH3-209ENST00000488964 RAB1CQ92928 201 aa12.85□□□□□ -0.35
CYTH3-209ENST00000488964 MAP6Q96JE9 813 aa12.85□□□□□ -0.35
CYTH3-209ENST00000488964 KCNJ15Q99712 375 aa12.85□□□□□ -0.35
CYTH3-209ENST00000488964 MED20Q9H944 212 aa12.85□□□□□ -0.35
CYTH3-209ENST00000488964 PNRC2Q9NPJ4 139 aaKnown RBP12.85□□□□□ -0.35
CYTH3-209ENST00000488964 ZNF275Q9NSD4 429 aaPredicted RBP12.85□□□□□ -0.35
CYTH3-209ENST00000488964 NAV3Q8IVL0 2385 aa12.85□□□□□ -0.35
CYTH3-209ENST00000488964 A0A096LNT2 108 aa12.84□□□□□ -0.35
CYTH3-209ENST00000488964 IGHV4-61A0A0C4DH41 118 aa12.84□□□□□ -0.35
CYTH3-209ENST00000488964 ZSCAN5BA6NJL1 495 aa12.84□□□□□ -0.35
CYTH3-209ENST00000488964 IFNL4K9M1U5 179 aa12.84□□□□□ -0.35
CYTH3-209ENST00000488964 CDC14BO60729 498 aa12.84□□□□□ -0.35
CYTH3-209ENST00000488964 NCR1O76036 304 aa12.84□□□□□ -0.35
CYTH3-209ENST00000488964 TACSTD2P09758 323 aa12.84□□□□□ -0.35
CYTH3-209ENST00000488964 PCMT1P22061 227 aa12.84□□□□□ -0.35
CYTH3-209ENST00000488964 RPS27P42677 84 aaKnown RBP12.84□□□□□ -0.35
CYTH3-209ENST00000488964 PTGES3Q15185 160 aaKnown RBP12.84□□□□□ -0.35
CYTH3-209ENST00000488964 LINC01590Q5TEZ4 76 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms