RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 COG8Q96MW5 612 aa15.95■□□□□ 0.14
PTCD3-217ENST00000488801 RDH12Q96NR8 316 aa15.95■□□□□ 0.14
PTCD3-217ENST00000488801 IL4I1Q96RQ9 567 aa15.95■□□□□ 0.14
PTCD3-217ENST00000488801 TMUB1Q9BVT8 246 aa15.95■□□□□ 0.14
PTCD3-217ENST00000488801 KLHDC2Q9Y2U9 406 aa15.95■□□□□ 0.14
PTCD3-217ENST00000488801 STARD10Q9Y365 291 aa15.95■□□□□ 0.14
PTCD3-217ENST00000488801 MTORP42345 2549 aa15.94■□□□□ 0.14
PTCD3-217ENST00000488801 SLC22A31A6NKX4 558 aa15.94■□□□□ 0.14
PTCD3-217ENST00000488801 M0R135 149 aa15.94■□□□□ 0.14
PTCD3-217ENST00000488801 F12P00748 615 aaPredicted RBP15.94■□□□□ 0.14
PTCD3-217ENST00000488801 GABRB1P18505 474 aa15.94■□□□□ 0.14
PTCD3-217ENST00000488801 ALOX5APP20292 161 aa15.94■□□□□ 0.14
PTCD3-217ENST00000488801 KITLGP21583 273 aa15.94■□□□□ 0.14
PTCD3-217ENST00000488801 PEX2P28328 305 aa15.94■□□□□ 0.14
PTCD3-217ENST00000488801 NAA10P41227 235 aaPredicted RBP15.94■□□□□ 0.14
PTCD3-217ENST00000488801 ALDH3B1P43353 468 aa15.94■□□□□ 0.14
PTCD3-217ENST00000488801 MMP15P51511 669 aa15.94■□□□□ 0.14
PTCD3-217ENST00000488801 CDC42P60953 191 aa15.94■□□□□ 0.14
PTCD3-217ENST00000488801 EIF2B1Q14232 305 aaKnown RBP15.94■□□□□ 0.14
PTCD3-217ENST00000488801 MAD2L1BPQ15013 274 aaPredicted RBP15.94■□□□□ 0.14
PTCD3-217ENST00000488801 ZIK1Q3SY52 487 aaPredicted RBP15.94■□□□□ 0.14
PTCD3-217ENST00000488801 SLC16A9Q7RTY1 509 aa15.94■□□□□ 0.14
PTCD3-217ENST00000488801 FAM81AQ8TBF8 368 aa15.94■□□□□ 0.14
PTCD3-217ENST00000488801 TRUB1Q8WWH5 349 aaKnown RBP15.94■□□□□ 0.14
PTCD3-217ENST00000488801 ZNF799Q96GE5 643 aa15.94■□□□□ 0.14
PTCD3-217ENST00000488801 KCNJ15Q99712 375 aa15.94■□□□□ 0.14
PTCD3-217ENST00000488801 YIPF3Q9GZM5 350 aa15.94■□□□□ 0.14
PTCD3-217ENST00000488801 ADGRL4Q9HBW9 690 aa15.94■□□□□ 0.14
PTCD3-217ENST00000488801 C8orf4Q9NR00 106 aa15.94■□□□□ 0.14
PTCD3-217ENST00000488801 SLCO1C1Q9NYB5 712 aa15.94■□□□□ 0.14
PTCD3-217ENST00000488801 DUSP13Q9UII6 198 aa15.94■□□□□ 0.14
PTCD3-217ENST00000488801 CSPG4Q6UVK1 2322 aa15.94■□□□□ 0.14
PTCD3-217ENST00000488801 SLC16A6O15403 523 aa15.93■□□□□ 0.14
PTCD3-217ENST00000488801 LYNP07948 512 aa15.93■□□□□ 0.14
PTCD3-217ENST00000488801 ADH4P08319 380 aa15.93■□□□□ 0.14
PTCD3-217ENST00000488801 ADRA2AP08913 450 aa15.93■□□□□ 0.14
PTCD3-217ENST00000488801 NUDT6P53370 316 aa15.93■□□□□ 0.14
PTCD3-217ENST00000488801 TPTEP56180 551 aa15.93■□□□□ 0.14
PTCD3-217ENST00000488801 RPS7P62081 194 aaKnown RBP15.93■□□□□ 0.14
PTCD3-217ENST00000488801 SNRPGP62308 76 aaKnown RBP15.93■□□□□ 0.14
PTCD3-217ENST00000488801 GRB2P62993 217 aaKnown RBP15.93■□□□□ 0.14
PTCD3-217ENST00000488801 PSG7Q13046 419 aa15.93■□□□□ 0.14
PTCD3-217ENST00000488801 TRIP10Q15642 601 aa15.93■□□□□ 0.14
PTCD3-217ENST00000488801 OGFRL1Q5TC84 451 aaPredicted RBP15.93■□□□□ 0.14
PTCD3-217ENST00000488801 DRAM2Q6UX65 266 aa15.93■□□□□ 0.14
PTCD3-217ENST00000488801 PRSS45Q7RTY3 260 aa15.93■□□□□ 0.14
PTCD3-217ENST00000488801 ZCCHC24Q8N2G6 241 aaKnown RBP15.93■□□□□ 0.14
PTCD3-217ENST00000488801 PACRGLQ8N7B6 248 aa15.93■□□□□ 0.14
PTCD3-217ENST00000488801 Q96MF0 132 aa15.93■□□□□ 0.14
PTCD3-217ENST00000488801 DYNLRB1Q9NP97 96 aa15.93■□□□□ 0.14
PTCD3-217ENST00000488801 TAAR3PQ9P1P4 343 aa15.93■□□□□ 0.14
PTCD3-217ENST00000488801 CGGBP1Q9UFW8 167 aaPredicted RBP15.93■□□□□ 0.14
PTCD3-217ENST00000488801 MALRD1Q5VYJ5 2156 aa15.92■□□□□ 0.14
PTCD3-217ENST00000488801 A0A1W2PPW3 197 aa15.92■□□□□ 0.14
PTCD3-217ENST00000488801 PRR32B1ATL7 298 aa15.92■□□□□ 0.14
PTCD3-217ENST00000488801 F5H5K5 113 aa15.92■□□□□ 0.14
PTCD3-217ENST00000488801 GCH1P30793 250 aa15.92■□□□□ 0.14
PTCD3-217ENST00000488801 HTR1FP30939 366 aa15.92■□□□□ 0.14
PTCD3-217ENST00000488801 ALKBH6Q3KRA9 238 aa15.92■□□□□ 0.14
PTCD3-217ENST00000488801 NAA40Q86UY6 237 aa15.92■□□□□ 0.14
PTCD3-217ENST00000488801 GTF3AQ92664 365 aaKnown RBP15.92■□□□□ 0.14
PTCD3-217ENST00000488801 SPTSSAQ969W0 71 aa15.92■□□□□ 0.14
PTCD3-217ENST00000488801 ZNF582Q96NG8 517 aaPredicted RBP15.92■□□□□ 0.14
PTCD3-217ENST00000488801 CNN2Q99439 309 aaKnown RBP15.92■□□□□ 0.14
PTCD3-217ENST00000488801 COPS4Q9BT78 406 aa15.92■□□□□ 0.14
PTCD3-217ENST00000488801 RAB1BQ9H0U4 201 aa15.92■□□□□ 0.14
PTCD3-217ENST00000488801 MS4A5Q9H3V2 200 aa15.92■□□□□ 0.14
PTCD3-217ENST00000488801 DCLRE1BQ9H816 532 aa15.92■□□□□ 0.14
PTCD3-217ENST00000488801 SMPD3Q9NY59 655 aaPredicted RBP15.92■□□□□ 0.14
PTCD3-217ENST00000488801 WARS2Q9UGM6 360 aaKnown RBP15.92■□□□□ 0.14
PTCD3-217ENST00000488801 COPS3Q9UNS2 423 aa15.92■□□□□ 0.14
PTCD3-217ENST00000488801 NSD1Q96L73 2696 aaPredicted RBP15.92■□□□□ 0.14
PTCD3-217ENST00000488801 A0A096LNT2 108 aa15.91■□□□□ 0.14
PTCD3-217ENST00000488801 C17orf100A8MU93 164 aa15.91■□□□□ 0.14
PTCD3-217ENST00000488801 NCR1O76036 304 aa15.91■□□□□ 0.14
PTCD3-217ENST00000488801 LY6HO94772 140 aa15.91■□□□□ 0.14
PTCD3-217ENST00000488801 RAC2P15153 192 aa15.91■□□□□ 0.14
PTCD3-217ENST00000488801 SELENOVP59797 346 aa15.91■□□□□ 0.14
PTCD3-217ENST00000488801 TMED1Q13445 227 aa15.91■□□□□ 0.14
PTCD3-217ENST00000488801 CLEC12BQ2HXU8 276 aa15.91■□□□□ 0.14
PTCD3-217ENST00000488801 SNAI3Q3KNW1 292 aa15.91■□□□□ 0.14
PTCD3-217ENST00000488801 LPCAT4Q643R3 524 aa15.91■□□□□ 0.14
PTCD3-217ENST00000488801 RFLNBQ8N5W9 214 aa15.91■□□□□ 0.14
PTCD3-217ENST00000488801 ZNF525Q8N782 197 aa15.91■□□□□ 0.14
PTCD3-217ENST00000488801 OR5L1Q8NGL2 311 aa15.91■□□□□ 0.14
PTCD3-217ENST00000488801 NEU4Q8WWR8 484 aaPredicted RBP15.91■□□□□ 0.14
PTCD3-217ENST00000488801 UBE2FQ969M7 185 aa15.91■□□□□ 0.14
PTCD3-217ENST00000488801 HAVCR1Q96D42 359 aa15.91■□□□□ 0.14
PTCD3-217ENST00000488801 VRK1Q99986 396 aaPredicted RBP15.91■□□□□ 0.14
PTCD3-217ENST00000488801 MYOZ1Q9NP98 299 aaPredicted RBP15.91■□□□□ 0.14
PTCD3-217ENST00000488801 FAM118AQ9NWS6 357 aa15.91■□□□□ 0.14
PTCD3-217ENST00000488801 NKIRAS2Q9NYR9 191 aa15.91■□□□□ 0.14
PTCD3-217ENST00000488801 DNAJC27Q9NZQ0 273 aa15.91■□□□□ 0.14
PTCD3-217ENST00000488801 PURGQ9UJV8 347 aaKnown RBP15.91■□□□□ 0.14
PTCD3-217ENST00000488801 DOCK11Q5JSL3 2073 aa15.9■□□□□ 0.14
PTCD3-217ENST00000488801 A0A1B0GWJ7 208 aa15.9■□□□□ 0.14
PTCD3-217ENST00000488801 C5orf63A6NC05 138 aa15.9■□□□□ 0.14
PTCD3-217ENST00000488801 ZSCAN5BA6NJL1 495 aa15.9■□□□□ 0.14
PTCD3-217ENST00000488801 SSX4O60224 188 aa15.9■□□□□ 0.14
PTCD3-217ENST00000488801 MRPL3P09001 348 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms