RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 CENPMQ9NSP4 180 aa11.03□□□□□ -0.64
PHF1-210ENST00000488767 DDX28Q9NUL7 540 aaKnown RBP11.03□□□□□ -0.64
PHF1-210ENST00000488767 NKIRAS2Q9NYR9 191 aa11.03□□□□□ -0.64
PHF1-210ENST00000488767 H2AFY2Q9P0M6 372 aaPredicted RBP11.03□□□□□ -0.64
PHF1-210ENST00000488767 STARD10Q9Y365 291 aa11.03□□□□□ -0.64
PHF1-210ENST00000488767 ACANP16112 2415 aa11.03□□□□□ -0.64
PHF1-210ENST00000488767 M0R135 149 aa11.02□□□□□ -0.65
PHF1-210ENST00000488767 SPRY3O43610 288 aa11.02□□□□□ -0.65
PHF1-210ENST00000488767 HEXAP06865 529 aa11.02□□□□□ -0.65
PHF1-210ENST00000488767 ACSM4P0C7M7 580 aa11.02□□□□□ -0.65
PHF1-210ENST00000488767 RAC2P15153 192 aa11.02□□□□□ -0.65
PHF1-210ENST00000488767 RPS27P42677 84 aaKnown RBP11.02□□□□□ -0.65
PHF1-210ENST00000488767 NR4A2P43354 598 aa11.02□□□□□ -0.65
PHF1-210ENST00000488767 CCL8P80075 99 aa11.02□□□□□ -0.65
PHF1-210ENST00000488767 DBPQ10586 325 aaPredicted RBP11.02□□□□□ -0.65
PHF1-210ENST00000488767 GGTLC2Q14390 218 aa11.02□□□□□ -0.65
PHF1-210ENST00000488767 PCK2Q16822 640 aa11.02□□□□□ -0.65
PHF1-210ENST00000488767 TMEM236Q5W0B7 351 aa11.02□□□□□ -0.65
PHF1-210ENST00000488767 DRAM2Q6UX65 266 aa11.02□□□□□ -0.65
PHF1-210ENST00000488767 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.02□□□□□ -0.65
PHF1-210ENST00000488767 ZNF454Q8N9F8 522 aa11.02□□□□□ -0.65
PHF1-210ENST00000488767 ZNF799Q96GE5 643 aa11.02□□□□□ -0.65
PHF1-210ENST00000488767 CIB1Q99828 191 aa11.02□□□□□ -0.65
PHF1-210ENST00000488767 C1QTNF5Q9BXJ0 243 aa11.02□□□□□ -0.65
PHF1-210ENST00000488767 TOR3AQ9H497 397 aa11.02□□□□□ -0.65
PHF1-210ENST00000488767 CHODLQ9H9P2 273 aa11.02□□□□□ -0.65
PHF1-210ENST00000488767 PTTG3PQ9NZH4 202 aa11.02□□□□□ -0.65
PHF1-210ENST00000488767 MED13LQ71F56 2210 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 MITFO75030 526 aaPredicted RBP11.01□□□□□ -0.65
PHF1-210ENST00000488767 LYNP07948 512 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 KITLGP21583 273 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 ACHEP22303 614 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 RAD23AP54725 363 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 LOXL1Q08397 574 aaPredicted RBP11.01□□□□□ -0.65
PHF1-210ENST00000488767 PSG7Q13046 419 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 ZSCAN26Q16670 478 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 TSTQ16762 297 aaKnown RBP11.01□□□□□ -0.65
PHF1-210ENST00000488767 HFEQ30201 348 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 LINC01590Q5TEZ4 76 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 LYPD4Q6UWN0 246 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 FBXW12Q6X9E4 464 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 RHOUQ7L0Q8 258 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 MRPL21Q7Z2W9 205 aaKnown RBP11.01□□□□□ -0.65
PHF1-210ENST00000488767 DPY19L4Q7Z388 723 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 GID4Q8IVV7 300 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 ZNF283Q8N7M2 679 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 ZNRF4Q8WWF5 429 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 HAVCR1Q96D42 359 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 CMBLQ96DG6 245 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 ZMYND19Q96E35 227 aaPredicted RBP11.01□□□□□ -0.65
PHF1-210ENST00000488767 ELMOD3Q96FG2 381 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 MAP6Q96JE9 813 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 ZNF582Q96NG8 517 aaPredicted RBP11.01□□□□□ -0.65
PHF1-210ENST00000488767 PKP2Q99959 881 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 RIBC2Q9H4K1 309 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 OPA3Q9H6K4 179 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 MARCH7Q9H992 704 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 S100A14Q9HCY8 104 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 PNRC2Q9NPJ4 139 aaKnown RBP11.01□□□□□ -0.65
PHF1-210ENST00000488767 USE1Q9NZ43 259 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 TMEFF2Q9UIK5 374 aaPredicted RBP11.01□□□□□ -0.65
PHF1-210ENST00000488767 PURGQ9UJV8 347 aaKnown RBP11.01□□□□□ -0.65
PHF1-210ENST00000488767 ARFGEF3Q5TH69 2177 aa11.01□□□□□ -0.65
PHF1-210ENST00000488767 IGHV1-69-2A0A0G2JMI3 117 aa11□□□□□ -0.65
PHF1-210ENST00000488767 SLC22A31A6NKX4 558 aa11□□□□□ -0.65
PHF1-210ENST00000488767 ZAR1LA6NP61 321 aa11□□□□□ -0.65
PHF1-210ENST00000488767 TLX2O43763 284 aaPredicted RBP11□□□□□ -0.65
PHF1-210ENST00000488767 LY6G6DO95868 133 aa11□□□□□ -0.65
PHF1-210ENST00000488767 HPXP02790 462 aa11□□□□□ -0.65
PHF1-210ENST00000488767 H2BFMP0C1H6 154 aa11□□□□□ -0.65
PHF1-210ENST00000488767 TNFRSF1AP19438 455 aa11□□□□□ -0.65
PHF1-210ENST00000488767 GIFP27352 417 aa11□□□□□ -0.65
PHF1-210ENST00000488767 MAGEB1P43366 347 aa11□□□□□ -0.65
PHF1-210ENST00000488767 GPR6P46095 362 aaPredicted RBP11□□□□□ -0.65
PHF1-210ENST00000488767 MMP15P51511 669 aa11□□□□□ -0.65
PHF1-210ENST00000488767 CHN2P52757 468 aa11□□□□□ -0.65
PHF1-210ENST00000488767 TMEM33P57088 247 aa11□□□□□ -0.65
PHF1-210ENST00000488767 CDC42P60953 191 aa11□□□□□ -0.65
PHF1-210ENST00000488767 EFNB1P98172 346 aa11□□□□□ -0.65
PHF1-210ENST00000488767 SLC3A1Q07837 685 aa11□□□□□ -0.65
PHF1-210ENST00000488767 APOFQ13790 326 aa11□□□□□ -0.65
PHF1-210ENST00000488767 SLX4IPQ5VYV7 408 aa11□□□□□ -0.65
PHF1-210ENST00000488767 PGAP1Q75T13 922 aa11□□□□□ -0.65
PHF1-210ENST00000488767 SPATC1Q76KD6 591 aa11□□□□□ -0.65
PHF1-210ENST00000488767 MAPK1IP1LQ8NDC0 245 aa11□□□□□ -0.65
PHF1-210ENST00000488767 THEM6Q8WUY1 208 aa11□□□□□ -0.65
PHF1-210ENST00000488767 TIMD4Q96H15 378 aa11□□□□□ -0.65
PHF1-210ENST00000488767 KCNJ15Q99712 375 aa11□□□□□ -0.65
PHF1-210ENST00000488767 SMR3AQ99954 134 aa11□□□□□ -0.65
PHF1-210ENST00000488767 C9orf16Q9BUW7 83 aa11□□□□□ -0.65
PHF1-210ENST00000488767 GABARAPL3Q9BY60 117 aa11□□□□□ -0.65
PHF1-210ENST00000488767 BPESC1Q9GZL8 116 aa11□□□□□ -0.65
PHF1-210ENST00000488767 GSX1Q9H4S2 264 aaPredicted RBP11□□□□□ -0.65
PHF1-210ENST00000488767 IMPAD1Q9NX62 359 aa11□□□□□ -0.65
PHF1-210ENST00000488767 LAMP5Q9UJQ1 280 aa11□□□□□ -0.65
PHF1-210ENST00000488767 NOP16Q9Y3C1 178 aaKnown RBP11□□□□□ -0.65
PHF1-210ENST00000488767 TMEM14AQ9Y6G1 99 aa11□□□□□ -0.65
PHF1-210ENST00000488767 PPIHO43447 177 aaKnown RBP10.99□□□□□ -0.65
PHF1-210ENST00000488767 BAG2O95816 211 aa10.99□□□□□ -0.65
PHF1-210ENST00000488767 IGHV1-46P01743 117 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms