RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 DENND2DQ9H6A0 471 aaPredicted RBP5.03□□□□□ -1.6
CDHR3-213ENST00000488386 EFCAB1Q9HAE3 211 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 CCNB1IP1Q9NPC3 277 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 MED4Q9NPJ6 270 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 ZNF275Q9NSD4 429 aaPredicted RBP5.03□□□□□ -1.6
CDHR3-213ENST00000488386 ARL8BQ9NVJ2 186 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 ADA2Q9NZK5 511 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 SLC7A8Q9UHI5 535 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 KCNS2Q9ULS6 477 aa5.03□□□□□ -1.6
CDHR3-213ENST00000488386 FBN1P35555 2871 aaKnown RBP5.02□□□□□ -1.61
CDHR3-213ENST00000488386 IQCMA0A1B0GVH7 501 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 C5orf49A4QMS7 147 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 RNF212BA8MTL3 300 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 FAM157AC9JC47 383 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 SOCS2O14508 198 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 SLC22A2O15244 555 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 PHF1O43189 567 aaPredicted RBP5.02□□□□□ -1.61
CDHR3-213ENST00000488386 SPRY3O43610 288 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 SNX3O60493 162 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 THRBP10828 461 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 CTLA4P16410 223 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 ZNF23P17027 643 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 STOMP27105 288 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 APLNRP35414 380 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 GPR6P46095 362 aaPredicted RBP5.02□□□□□ -1.61
CDHR3-213ENST00000488386 ZNF134P52741 427 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 UCP2P55851 309 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 FXYD6P3P58550 94 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 RPL27P61353 136 aaKnown RBP5.02□□□□□ -1.61
CDHR3-213ENST00000488386 RPS7P62081 194 aaKnown RBP5.02□□□□□ -1.61
CDHR3-213ENST00000488386 PPP1R8Q12972 351 aaKnown RBP5.02□□□□□ -1.61
CDHR3-213ENST00000488386 ENDOGQ14249 297 aaKnown RBP5.02□□□□□ -1.61
CDHR3-213ENST00000488386 MEP1BQ16820 701 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 FAM120AOSQ5T036 256 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 THEM4Q5T1C6 240 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 FAM166AQ6J272 317 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 C1orf94Q6P1W5 598 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 RINLQ6ZS11 566 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 PTCHD4Q6ZW05 846 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 RFPL4BQ6ZWI9 263 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 MBOAT2Q6ZWT7 520 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 ARPINQ7Z6K5 226 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 OAFQ86UD1 273 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 PHC2Q8IXK0 858 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 ZNF786Q8N393 782 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 LNX2Q8N448 690 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 CLDND2Q8NHS1 167 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 SYNPRQ8TBG9 265 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 SLC7A13Q8TCU3 470 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 IPCEF1Q8WWN9 437 aaPredicted RBP5.02□□□□□ -1.61
CDHR3-213ENST00000488386 ACOT11Q8WXI4 607 aaPredicted RBP5.02□□□□□ -1.61
CDHR3-213ENST00000488386 LZICQ8WZA0 190 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 TSSK2Q96PF2 358 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 HOPXQ9BPY8 73 aaPredicted RBP5.02□□□□□ -1.61
CDHR3-213ENST00000488386 ZNF416Q9BWM5 594 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 OR2H1Q9GZK4 316 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 OR2J1Q9GZK6 312 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 POLR2J2Q9GZM3 115 aaKnown RBP5.02□□□□□ -1.61
CDHR3-213ENST00000488386 SHARPINQ9H0F6 387 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 POLR2J3Q9H1A7 115 aaKnown RBP5.02□□□□□ -1.61
CDHR3-213ENST00000488386 FN3KQ9H479 309 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 NMNAT1Q9HAN9 279 aaPredicted RBP5.02□□□□□ -1.61
CDHR3-213ENST00000488386 SIAEQ9HAT2 523 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 TBCCD1Q9NVR7 557 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 DCAF16Q9NXF7 216 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 NDUFAF4Q9P032 175 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 ABCD2Q9UBJ2 740 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 DMRT1Q9Y5R6 373 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 IER3IP1Q9Y5U9 82 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 ENPP4Q9Y6X5 453 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 JMJD1CQ15652 2540 aa5.02□□□□□ -1.61
CDHR3-213ENST00000488386 IGHV3-64DA0A0J9YX35 117 aa5.01□□□□□ -1.61
CDHR3-213ENST00000488386 SLC22A23A1A5C7 686 aa5.01□□□□□ -1.61
CDHR3-213ENST00000488386 ZSCAN5BA6NJL1 495 aa5.01□□□□□ -1.61
CDHR3-213ENST00000488386 C17orf100A8MU93 164 aa5.01□□□□□ -1.61
CDHR3-213ENST00000488386 NDUFS8O00217 210 aa5.01□□□□□ -1.61
CDHR3-213ENST00000488386 TPD52L2O43399 206 aaKnown RBP5.01□□□□□ -1.61
CDHR3-213ENST00000488386 PPIHO43447 177 aaKnown RBP5.01□□□□□ -1.61
CDHR3-213ENST00000488386 PPP1R3DO95685 299 aa5.01□□□□□ -1.61
CDHR3-213ENST00000488386 IGHMP01871 453 aa5.01□□□□□ -1.61
CDHR3-213ENST00000488386 H1F0P07305 194 aaKnown RBP5.01□□□□□ -1.61
CDHR3-213ENST00000488386 GRPP07492 148 aa5.01□□□□□ -1.61
CDHR3-213ENST00000488386 ERCC1P07992 297 aaPredicted RBP5.01□□□□□ -1.61
CDHR3-213ENST00000488386 HKR1P10072 659 aa5.01□□□□□ -1.61
CDHR3-213ENST00000488386 ATP6V1B2P21281 511 aa5.01□□□□□ -1.61
CDHR3-213ENST00000488386 PAX7P23759 505 aa5.01□□□□□ -1.61
CDHR3-213ENST00000488386 IFNA8P32881 189 aa5.01□□□□□ -1.61
CDHR3-213ENST00000488386 OMPP47874 163 aa5.01□□□□□ -1.61
CDHR3-213ENST00000488386 CENPAP49450 140 aa5.01□□□□□ -1.61
CDHR3-213ENST00000488386 GDI2P50395 445 aaKnown RBP5.01□□□□□ -1.61
CDHR3-213ENST00000488386 ZNF133P52736 654 aaPredicted RBP5.01□□□□□ -1.61
CDHR3-213ENST00000488386 KLF3P57682 345 aaPredicted RBP5.01□□□□□ -1.61
CDHR3-213ENST00000488386 RPS23P62266 143 aaKnown RBP5.01□□□□□ -1.61
CDHR3-213ENST00000488386 MRPS34P82930 218 aaKnown RBP5.01□□□□□ -1.61
CDHR3-213ENST00000488386 SPIBQ01892 262 aa5.01□□□□□ -1.61
CDHR3-213ENST00000488386 KRR1Q13601 381 aaKnown RBP5.01□□□□□ -1.61
CDHR3-213ENST00000488386 GFOD2Q3B7J2 385 aa5.01□□□□□ -1.61
CDHR3-213ENST00000488386 KRTAP24-1Q3LI83 254 aa5.01□□□□□ -1.61
CDHR3-213ENST00000488386 ZBED5Q49AG3 693 aa5.01□□□□□ -1.61
CDHR3-213ENST00000488386 C1QTNF12Q5T7M4 302 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms