RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 LMO4P61968 165 aa17.33■□□□□ 0.36
HDAC4-209ENST00000487617 RSPO1Q2MKA7 263 aaPredicted RBP17.33■□□□□ 0.36
HDAC4-209ENST00000487617 KRTAP27-1Q3LI81 207 aa17.33■□□□□ 0.36
HDAC4-209ENST00000487617 SPRNQ5BIV9 151 aa17.33■□□□□ 0.36
HDAC4-209ENST00000487617 LYPD4Q6UWN0 246 aa17.33■□□□□ 0.36
HDAC4-209ENST00000487617 FBXW12Q6X9E4 464 aa17.33■□□□□ 0.36
HDAC4-209ENST00000487617 Q6ZR03 302 aa17.33■□□□□ 0.36
HDAC4-209ENST00000487617 OR5AS1Q8N127 324 aa17.33■□□□□ 0.36
HDAC4-209ENST00000487617 RAB1CQ92928 201 aa17.33■□□□□ 0.36
HDAC4-209ENST00000487617 MAP6Q96JE9 813 aa17.33■□□□□ 0.36
HDAC4-209ENST00000487617 RBM4Q9BWF3 364 aaKnown RBP17.33■□□□□ 0.36
HDAC4-209ENST00000487617 YY1AP1Q9H869 796 aa17.33■□□□□ 0.36
HDAC4-209ENST00000487617 LPAR2Q9HBW0 351 aa17.33■□□□□ 0.36
HDAC4-209ENST00000487617 PNRC2Q9NPJ4 139 aaKnown RBP17.33■□□□□ 0.36
HDAC4-209ENST00000487617 PDP1Q9P0J1 537 aaPredicted RBP17.33■□□□□ 0.36
HDAC4-209ENST00000487617 POMPQ9Y244 141 aa17.33■□□□□ 0.36
HDAC4-209ENST00000487617 RIIAD1A6NNX1 92 aa17.32■□□□□ 0.36
HDAC4-209ENST00000487617 FAM157AC9JC47 383 aa17.32■□□□□ 0.36
HDAC4-209ENST00000487617 H3BN98 237 aa17.32■□□□□ 0.36
HDAC4-209ENST00000487617 E2F6O75461 281 aa17.32■□□□□ 0.36
HDAC4-209ENST00000487617 GYPBP06028 91 aa17.32■□□□□ 0.36
HDAC4-209ENST00000487617 ACSM4P0C7M7 580 aa17.32■□□□□ 0.36
HDAC4-209ENST00000487617 RPS27P42677 84 aaKnown RBP17.32■□□□□ 0.36
HDAC4-209ENST00000487617 SLC25A1P53007 311 aa17.32■□□□□ 0.36
HDAC4-209ENST00000487617 DVL1P1P54792 670 aaPredicted RBP17.32■□□□□ 0.36
HDAC4-209ENST00000487617 SLC3A1Q07837 685 aa17.32■□□□□ 0.36
HDAC4-209ENST00000487617 OR2T2Q6IF00 324 aa17.32■□□□□ 0.36
HDAC4-209ENST00000487617 TMEM179BQ7Z7N9 219 aa17.32■□□□□ 0.36
HDAC4-209ENST00000487617 IQCF1Q8N6M8 205 aa17.32■□□□□ 0.36
HDAC4-209ENST00000487617 MDFIQ99750 246 aa17.32■□□□□ 0.36
HDAC4-209ENST00000487617 TMEFF2Q9UIK5 374 aaPredicted RBP17.32■□□□□ 0.36
HDAC4-209ENST00000487617 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.31■□□□□ 0.367e-7■■■□□ 18.6
HDAC4-209ENST00000487617 ZNF3P17036 446 aa17.31■□□□□ 0.36
HDAC4-209ENST00000487617 SPI1P17947 270 aa17.31■□□□□ 0.36
HDAC4-209ENST00000487617 FMO3P31513 532 aa17.31■□□□□ 0.36
HDAC4-209ENST00000487617 CBX1P83916 185 aa17.31■□□□□ 0.36
HDAC4-209ENST00000487617 COLCA1Q6ZS62 124 aa17.31■□□□□ 0.36
HDAC4-209ENST00000487617 GLCCI1Q86VQ1 547 aa17.31■□□□□ 0.36
HDAC4-209ENST00000487617 C1QTNF5Q9BXJ0 243 aa17.31■□□□□ 0.36
HDAC4-209ENST00000487617 CADM1Q9BY67 442 aaKnown RBP17.31■□□□□ 0.36
HDAC4-209ENST00000487617 NMNAT2Q9BZQ4 307 aa17.31■□□□□ 0.36
HDAC4-209ENST00000487617 ZNF665Q9H7R5 613 aa17.31■□□□□ 0.36
HDAC4-209ENST00000487617 WDR76Q9H967 626 aa17.31■□□□□ 0.36
HDAC4-209ENST00000487617 COMMD3-BMI1R4GMX3 469 aa17.31■□□□□ 0.36
HDAC4-209ENST00000487617 TCRBV3S1A0A5B6 114 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 SURF4O15260 269 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 GSC2O15499 205 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 FKBP6O75344 327 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 LCATP04180 440 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 MSMBP08118 114 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 SPARCP09486 303 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 CLUP10909 449 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 TNFRSF1AP19438 455 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 POU1F1P28069 291 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 GRK5P34947 590 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 TPTEP56180 551 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 BNIP1Q12981 228 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 PEG10Q86TG7 708 aaKnown RBP17.3■□□□□ 0.36
HDAC4-209ENST00000487617 NAA40Q86UY6 237 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 ATG16L2Q8NAA4 619 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 ZNF511Q8NB15 262 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 OR8G5Q8NG78 346 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 OR10S1Q8NGN2 331 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 OR6K6Q8NGW6 343 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 OR51F2Q8NH61 342 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 ITLN1Q8WWA0 313 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 SPTSSAQ969W0 71 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 RAB39BQ96DA2 213 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 ZNF582Q96NG8 517 aaPredicted RBP17.3■□□□□ 0.36
HDAC4-209ENST00000487617 HCAR1Q9BXC0 346 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 ZNF556Q9HAH1 456 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 CMC2Q9NRP2 79 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 IL19Q9UHD0 177 aa17.3■□□□□ 0.36
HDAC4-209ENST00000487617 ISPDA4D126 451 aa17.29■□□□□ 0.36
HDAC4-209ENST00000487617 M0R135 149 aa17.29■□□□□ 0.36
HDAC4-209ENST00000487617 PSKH1P11801 424 aa17.29■□□□□ 0.36
HDAC4-209ENST00000487617 PCMT1P22061 227 aa17.29■□□□□ 0.36
HDAC4-209ENST00000487617 ENTPD1P49961 510 aa17.29■□□□□ 0.36
HDAC4-209ENST00000487617 MALLQ13021 153 aa17.29■□□□□ 0.36
HDAC4-209ENST00000487617 HNRNPA0Q13151 305 aaKnown RBP17.29■□□□□ 0.36
HDAC4-209ENST00000487617 DCXRQ7Z4W1 244 aa17.29■□□□□ 0.36
HDAC4-209ENST00000487617 HS3ST5Q8IZT8 346 aa17.29■□□□□ 0.36
HDAC4-209ENST00000487617 OR13G1Q8NGZ3 307 aa17.29■□□□□ 0.36
HDAC4-209ENST00000487617 TMEM186Q96B77 213 aa17.29■□□□□ 0.36
HDAC4-209ENST00000487617 OTULINQ96BN8 352 aa17.29■□□□□ 0.36
HDAC4-209ENST00000487617 ZNF799Q96GE5 643 aa17.29■□□□□ 0.36
HDAC4-209ENST00000487617 GAL3ST1Q99999 423 aa17.29■□□□□ 0.36
HDAC4-209ENST00000487617 MED20Q9H944 212 aa17.29■□□□□ 0.36
HDAC4-209ENST00000487617 HIF1ANQ9NWT6 349 aa17.29■□□□□ 0.36
HDAC4-209ENST00000487617 DNAJB9Q9UBS3 223 aa17.29■□□□□ 0.36
HDAC4-209ENST00000487617 FAM183AA6NL82 134 aa17.28■□□□□ 0.36
HDAC4-209ENST00000487617 IQCF6A8MYZ5 107 aa17.28■□□□□ 0.36
HDAC4-209ENST00000487617 ZNF593O00488 134 aaPredicted RBP17.28■□□□□ 0.36
HDAC4-209ENST00000487617 ANPEPP15144 967 aa17.28■□□□□ 0.36
HDAC4-209ENST00000487617 SELEP16581 610 aa17.28■□□□□ 0.36
HDAC4-209ENST00000487617 PRKACGP22612 351 aa17.28■□□□□ 0.36
HDAC4-209ENST00000487617 SLC6A9P48067 706 aa17.28■□□□□ 0.36
HDAC4-209ENST00000487617 BLVRAP53004 296 aa17.28■□□□□ 0.36
HDAC4-209ENST00000487617 ACSM5Q6NUN0 579 aa17.28■□□□□ 0.36
HDAC4-209ENST00000487617 SLC27A4Q6P1M0 643 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms