RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 CFAP45Q9UL16 551 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 TBC1D24Q9ULP9 559 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 GMEB1Q9Y692 573 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 NCOA3Q9Y6Q9 1424 aa2.16□□□□□ -2.06
SNRNP27-204ENST00000487029 REREQ9P2R6 1566 aa2.15□□□□□ -2.06
SNRNP27-204ENST00000487029 CCDC18Q5T9S5 1454 aa2.15□□□□□ -2.06
SNRNP27-204ENST00000487029 F8VZ95 297 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 K7EMT4 169 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 CYTH3O43739 400 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 SMIM24O75264 130 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 FLOT1O75955 427 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 ASGR1P07306 291 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 IDO1P14902 403 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 IGFBP3P17936 291 aaPredicted RBP2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 ATF6P18850 670 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 GSTM3P21266 225 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 BLVRAP53004 296 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 ARPC4P59998 168 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 UBE2NP61088 152 aaKnown RBP2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 PPP1CBP62140 327 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 ESRRGP62508 458 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 MRPS25P82663 173 aaKnown RBP2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 CDH17Q12864 832 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 SLAQ13239 276 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 ITIH4Q14624 930 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 C16orf72Q14CZ0 275 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 ORMDL2Q53FV1 153 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 CLEC2AQ6UVW9 174 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 NPSR1Q6W5P4 371 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 MBOAT2Q6ZWT7 520 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 KATNAL2Q8IYT4 538 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 CHST4Q8NCG5 386 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 APH1BQ8WW43 257 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 LRRC45Q96CN5 670 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 UCK2Q9BZX2 261 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 SLC7A5P2Q9GIP4 190 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 ZSCAN16Q9H4T2 348 aaPredicted RBP2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 PARVBQ9HBI1 364 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 HMG20AQ9NP66 347 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 RABL2AQ9UBK7 228 aaPredicted RBP2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 MAPKBP1O60336 1514 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 UACAQ9BZF9 1416 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 ZNFX1Q9P2E3 1918 aaKnown RBP2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 EVC2Q86UK5 1308 aa2.15□□□□□ -2.07
SNRNP27-204ENST00000487029 PIKFYVEQ9Y2I7 2098 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 COL22A1Q8NFW1 1626 aaPredicted RBP2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 TRAV25A0A0B4J276 109 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 OR6C74A6NCV1 312 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 LRRIQ4A6NIV6 560 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 NCBP2LA6PVI3 153 aaKnown RBP2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 RSPH10B2B2RC85 870 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 TEX46H3BTG2 121 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 M0R3G1 203 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 SLC9A3R1O14745 358 aaPredicted RBP2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 PFDN1O60925 122 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 RDH16O75452 317 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 ZNF324O75467 553 aaPredicted RBP2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 ZNF189O75820 626 aaPredicted RBP2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 CTDNEP1O95476 244 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 LSM8O95777 96 aaKnown RBP2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 CD160O95971 181 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 HLA-HP01893 362 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 HBE1P02100 147 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 EIF4EP06730 217 aaKnown RBP2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 CD3GP09693 182 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 RSPH10BP0C881 870 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 ERGP11308 486 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 CTRB1P17538 263 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 PSMC3P17980 439 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 TCN2P20062 427 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 RAB3AP20336 220 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 S100A1P23297 94 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 TNFSF9P41273 254 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 RPS5P46782 204 aaKnown RBP2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 HCAR3P49019 387 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 P2RX1P51575 399 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 PRR3P79522 188 aaKnown RBP2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 SEMG2Q02383 582 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 RCAN2Q14206 197 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 CHRFAM7AQ494W8 412 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 BEX5Q5H9J7 111 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 CCDC122Q5T0U0 273 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 TPTE2P1Q5T6R2 138 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 STUMQ69YW2 141 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 THOC7Q6I9Y2 204 aaKnown RBP2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 FAM71E1Q6IPT2 247 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 Q6ZR03 302 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 ABHD12BQ7Z5M8 362 aaPredicted RBP2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 MRPL55Q7Z7F7 128 aaKnown RBP2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 MICU2Q8IYU8 434 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 METTL13Q8N6R0 699 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 NPWQ8N729 165 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 OR10AD1Q8NGE0 317 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 OR52E2Q8NGJ4 325 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 UBALD1Q8TB05 177 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 AGR3Q8TD06 166 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 LRRC29Q8WV35 223 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 COL21A1Q96P44 957 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 SPNS1Q9H2V7 528 aa2.14□□□□□ -2.07
SNRNP27-204ENST00000487029 NCOR1P1Q9H4R4 102 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms