RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 HRH1P35367 487 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 CDK5Q00535 292 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 ADAM5Q6NVV9 412 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 IL34Q6ZMJ4 242 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 LYG2Q86SG7 212 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 RPS19BP1Q86WX3 136 aaKnown RBP14.92□□□□□ -0.02
COL7A1-210ENST00000487017 PBOV1Q9GZY1 135 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 CYSLTR2Q9NS75 346 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 IL20Q9NYY1 176 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 ADAM10O14672 748 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 SPINT2O43291 252 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 CCR2P41597 374 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 BHLHA9Q7RTU4 235 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 C1orf87Q8N0U7 546 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 APH1BQ8WW43 257 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 DECR2Q9NUI1 292 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 KLK11Q9UBX7 282 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 DSCR3O14972 297 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 AGBL4Q5VU57 503 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 OR51F2Q8NH61 342 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 APH1AQ96BI3 265 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 C10orf90Q96M02 699 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 SPACA1Q9HBV2 294 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 AK3Q9UIJ7 227 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 IDSB3KWA1 339 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 CXCL10P02778 98 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 RPL11P62913 178 aaKnown RBP14.91□□□□□ -0.02
COL7A1-210ENST00000487017 UBE2IP63279 158 aaKnown RBP14.91□□□□□ -0.02
COL7A1-210ENST00000487017 HES1Q14469 280 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 AANATQ16613 207 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 OR8G2PQ6IF36 304 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 SLC16A12Q6ZSM3 486 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 SCCPDHQ8NBX0 429 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 OR51H1Q8NH63 302 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 C12orf49Q9H741 205 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 HEYLQ9NQ87 328 aaPredicted RBP14.91□□□□□ -0.02
COL7A1-210ENST00000487017 SLC5A6Q9Y289 635 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 STRAPQ9Y3F4 350 aaKnown RBP14.91□□□□□ -0.02
COL7A1-210ENST00000487017 OR51B4Q9Y5P0 310 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 URGCP-MRPS24S4R325 110 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 IGLV3-16A0A075B6K0 115 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 SDCBPO00560 298 aaPredicted RBP14.91□□□□□ -0.02
COL7A1-210ENST00000487017 CAPZBP47756 277 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 ZNF85Q03923 595 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 EDDM3AQ14507 147 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 LHFPL2Q6ZUX7 228 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 LIMS2Q7Z4I7 341 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 C15orf54Q8N8G6 183 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 FER1L6-AS2Q96M78 137 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 WDFY2Q96P53 400 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 SHROOM3Q8TF72 1996 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 FRG2CA6NGY1 282 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 CD80P33681 288 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 CRYBB2P43320 205 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 PCK2Q16822 640 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 TEX261Q6UWH6 196 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 EXD3Q8N9H8 876 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 HPSE2Q8WWQ2 592 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 INTS12Q96CB8 462 aaKnown RBP14.91□□□□□ -0.02
COL7A1-210ENST00000487017 SPACA5Q96QH8 159 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 TIMM10BQ9Y5J6 103 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 U3KQ87 197 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 SERTM1A2A2V5 107 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 ZNF724A8MTY0 619 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 OR8U8P0C7N1 319 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 RPL12P30050 165 aaKnown RBP14.91□□□□□ -0.02
COL7A1-210ENST00000487017 RRADP55042 308 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 LINC00303Q3SY05 128 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 ZBTB37Q5TC79 503 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 NAA40Q86UY6 237 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 CATSPERDQ86XM0 798 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 OR52B4Q8NGK2 314 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 HMGCLL1Q8TB92 370 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 ERVMER34-1Q9H9K5 563 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 GAB2Q9UQC2 676 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 OSGIN2Q9Y236 505 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 SLCO1B1Q9Y6L6 691 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 A0A1W2PNR3 127 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 KLRC4-KLRK1H3BQV0 150 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 M0R135 149 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 HS3ST1O14792 307 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 OR10J4P0C629 311 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 CCR5P51681 352 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 CDONQ4KMG0 1287 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 Q6ZRG5 221 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 GCNT2Q8N0V5 402 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 HLA-CQ95604 372 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 ZNF799Q96GE5 643 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 CMTM3Q96MX0 182 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 TGIF2Q9GZN2 237 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 GNB4Q9HAV0 340 aa14.91□□□□□ -0.02
COL7A1-210ENST00000487017 UMAD1C9J7I0 102 aa14.9□□□□□ -0.02
COL7A1-210ENST00000487017 DVL1O14640 695 aa14.9□□□□□ -0.02
COL7A1-210ENST00000487017 TXNDC12O95881 172 aa14.9□□□□□ -0.02
COL7A1-210ENST00000487017 PNLIPRP2P54317 469 aa14.9□□□□□ -0.02
COL7A1-210ENST00000487017 DVL1P1P54792 670 aaPredicted RBP14.9□□□□□ -0.02
COL7A1-210ENST00000487017 IL10RAQ13651 578 aa14.9□□□□□ -0.02
COL7A1-210ENST00000487017 ZNF628Q5EBL2 1059 aa14.9□□□□□ -0.02
COL7A1-210ENST00000487017 C9orf152Q5JTZ5 239 aa14.9□□□□□ -0.02
COL7A1-210ENST00000487017 ZBTB44Q8NCP5 570 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms