RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 CX3CR1P49238 355 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 GDI2P50395 445 aaKnown RBP8.29□□□□□ -1.08
MCF2L-227ENST00000486806 ZNF83P51522 516 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 NAAAQ02083 359 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 BDH1Q02338 343 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 ACSM1Q08AH1 577 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 MRPL28Q13084 256 aaKnown RBP8.29□□□□□ -1.08
MCF2L-227ENST00000486806 SPHARQ15513 63 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 TBC1D28Q2M2D7 210 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 ZNF829Q3KNS6 432 aaPredicted RBP8.29□□□□□ -1.08
MCF2L-227ENST00000486806 UBE2UQ5VVX9 321 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 FDX2Q6P4F2 183 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 DRAM2Q6UX65 266 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 COLCA1Q6ZS62 124 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 ZNF367Q7RTV3 350 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 WFDC8Q8IUA0 241 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 DMRTC2Q8IXT2 367 aaPredicted RBP8.29□□□□□ -1.08
MCF2L-227ENST00000486806 YIPF7Q8N8F6 280 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 HAVCR2Q8TDQ0 301 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 SPTSSAQ969W0 71 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 ZC3HAV1LQ96H79 300 aaKnown RBP8.29□□□□□ -1.08
MCF2L-227ENST00000486806 DCLRE1CQ96SD1 692 aaKnown RBP8.29□□□□□ -1.08
MCF2L-227ENST00000486806 C1QTNF6Q9BXI9 259 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 C1QTNF5Q9BXJ0 243 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 MOB1AQ9H8S9 216 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 CRIM1Q9NZV1 1036 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 GRIP1Q9Y3R0 1128 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 SNX5Q9Y5X3 404 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 R4GMQ9 66 aa8.29□□□□□ -1.08
MCF2L-227ENST00000486806 DPRXA6NFQ7 191 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 DEFB108AA8MXU0 73 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 F5H5K5 113 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 J3QW42 95 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 SMPD2O60906 423 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 APOC1P02654 83 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 LCKP06239 509 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 RPSAP08865 295 aaKnown RBP8.28□□□□□ -1.08
MCF2L-227ENST00000486806 TACSTD2P09758 323 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 PTAFRP25105 342 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 LOXP28300 417 aaPredicted RBP8.28□□□□□ -1.08
MCF2L-227ENST00000486806 PRKXP51817 358 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 TPTEP56180 551 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 ZNF121P58317 390 aaPredicted RBP8.28□□□□□ -1.08
MCF2L-227ENST00000486806 NANOS3P60323 173 aaKnown RBP8.28□□□□□ -1.08
MCF2L-227ENST00000486806 GALK2Q01415 458 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 SPOCK1Q08629 439 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 CDK5R1Q15078 307 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 TAF13Q15543 124 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 CCDC58Q4VC31 144 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 WDR38Q5JTN6 314 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 TMEM108Q6UXF1 575 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 KCTD8Q6ZWB6 473 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 RFPL4BQ6ZWI9 263 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 CATSPERDQ86XM0 798 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 KLBQ86Z14 1044 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.28□□□□□ -1.08
MCF2L-227ENST00000486806 ZNF101Q8IZC7 436 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 PRSS35Q8N3Z0 413 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 ZNF283Q8N7M2 679 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 IL17RDQ8NFM7 739 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 OR1J2Q8NGS2 313 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 GATAD2BQ8WXI9 593 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 FCGR1BQ92637 280 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 C4orf45Q96LM5 186 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 OPALINQ96PE5 141 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 MRPS26Q9BYN8 205 aaKnown RBP8.28□□□□□ -1.08
MCF2L-227ENST00000486806 TRIM36Q9NQ86 728 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 G6PC2Q9NQR9 355 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 BABAM2Q9NXR7 383 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 NUFIP1Q9UHK0 495 aaKnown RBP8.28□□□□□ -1.08
MCF2L-227ENST00000486806 ST6GALNAC2Q9UJ37 374 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 MYO18BQ8IUG5 2567 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 FLNCQ14315 2725 aa8.28□□□□□ -1.08
MCF2L-227ENST00000486806 COL12A1Q99715 3063 aa8.27□□□□□ -1.09
MCF2L-227ENST00000486806 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.27□□□□□ -1.09
MCF2L-227ENST00000486806 TMEM269A0A1B0GVZ9 245 aa8.27□□□□□ -1.09
MCF2L-227ENST00000486806 C5orf63A6NC05 138 aa8.27□□□□□ -1.09
MCF2L-227ENST00000486806 ACOD1A6NK06 481 aa8.27□□□□□ -1.09
MCF2L-227ENST00000486806 PRSS44E7EML9 344 aa8.27□□□□□ -1.09
MCF2L-227ENST00000486806 LOC110117498-PIK3R3F6TDL0 507 aa8.27□□□□□ -1.09
MCF2L-227ENST00000486806 RPP14O95059 124 aaKnown RBP8.27□□□□□ -1.09
MCF2L-227ENST00000486806 IGLV3-1P01715 115 aa8.27□□□□□ -1.09
MCF2L-227ENST00000486806 SLC2A1P11166 492 aa8.27□□□□□ -1.09
MCF2L-227ENST00000486806 ATP6V1B1P15313 513 aa8.27□□□□□ -1.09
MCF2L-227ENST00000486806 JUNBP17275 347 aaPredicted RBP8.27□□□□□ -1.09
MCF2L-227ENST00000486806 PCSK6P29122 969 aa8.27□□□□□ -1.09
MCF2L-227ENST00000486806 PSMB10P40306 273 aa8.27□□□□□ -1.09
MCF2L-227ENST00000486806 KIR2DL3P43628 341 aa8.27□□□□□ -1.09
MCF2L-227ENST00000486806 KIR3DL2P43630 455 aa8.27□□□□□ -1.09
MCF2L-227ENST00000486806 SLC6A9P48067 706 aa8.27□□□□□ -1.09
MCF2L-227ENST00000486806 RGS6P49758 472 aa8.27□□□□□ -1.09
MCF2L-227ENST00000486806 CCR9P51686 369 aa8.27□□□□□ -1.09
MCF2L-227ENST00000486806 GTF2A1P52655 376 aaPredicted RBP8.27□□□□□ -1.09
MCF2L-227ENST00000486806 GBX2P52951 348 aaPredicted RBP8.27□□□□□ -1.09
MCF2L-227ENST00000486806 TAS2R43P59537 309 aa8.27□□□□□ -1.09
MCF2L-227ENST00000486806 BSPH1Q075Z2 132 aa8.27□□□□□ -1.09
MCF2L-227ENST00000486806 MLLT11Q13015 90 aaPredicted RBP8.27□□□□□ -1.09
MCF2L-227ENST00000486806 MED22Q15528 200 aa8.27□□□□□ -1.09
MCF2L-227ENST00000486806 SNAI3Q3KNW1 292 aa8.27□□□□□ -1.09
MCF2L-227ENST00000486806 BEX5Q5H9J7 111 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms