RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 ATF6BQ99941 703 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 ABHD6Q9BV23 337 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 ANKRD60Q9BZ19 345 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 CCDC90BQ9GZT6 254 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 OR10A4Q9H209 315 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 ADGRL4Q9HBW9 690 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 OBP2BQ9NPH6 170 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 SCN3BQ9NY72 215 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 B3GNT2Q9NY97 397 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 FZR1Q9UM11 496 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 GTF2A1LQ9UNN4 478 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 KLHDC2Q9Y2U9 406 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 GRIP1Q9Y3R0 1128 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 HSPE1-MOB4S4R3N1 261 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 PRR14LQ5THK1 2151 aa4.88□□□□□ -1.63
COPS3-208ENST00000486032 UNC79Q9P2D8 2635 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 LOC100509620A0A075B734 347 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 A0A1W2PQL4 384 aaPredicted RBP4.87□□□□□ -1.63
COPS3-208ENST00000486032 ZNF878C9JN71 531 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 H3BSH0 61 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 J3QLW9 94 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 SLC1A7O00341 560 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 RPP14O95059 124 aaKnown RBP4.87□□□□□ -1.63
COPS3-208ENST00000486032 FADS2O95864 444 aaKnown RBP4.87□□□□□ -1.63
COPS3-208ENST00000486032 ABHD16AO95870 558 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 PTHP01270 115 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 IGKV3-15P01624 115 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 CRYAAP02489 173 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 SERPINA5P05154 406 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 LCKP06239 509 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 ANXA2P07355 339 aaKnown RBP4.87□□□□□ -1.63
COPS3-208ENST00000486032 ZNF14P17017 642 aaPredicted RBP4.87□□□□□ -1.63
COPS3-208ENST00000486032 ZNF19P17023 458 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 ALOX5APP20292 161 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 EEF1B2P24534 225 aaKnown RBP4.87□□□□□ -1.63
COPS3-208ENST00000486032 PTAFRP25105 342 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 STOMP27105 288 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 CALCRP30988 508 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 PSMB10P40306 273 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 PEX19P40855 299 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 NAAAQ02083 359 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 MVKQ03426 396 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 ZNF85Q03923 595 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 TMED1Q13445 227 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 GFOD2Q3B7J2 385 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 NRN1LQ496H8 165 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 KLHL22Q53GT1 634 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 BEX5Q5H9J7 111 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 SPATA46Q5T0L3 261 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 NCMAPQ5T1S8 102 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 LAIR2Q6ISS4 152 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 DPPA2Q7Z7J5 298 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 NAA40Q86UY6 237 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 CDC20BQ86Y33 519 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 ZNF584Q8IVC4 421 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 PAQR4Q8N4S7 273 aaPredicted RBP4.87□□□□□ -1.63
COPS3-208ENST00000486032 YIPF7Q8N8F6 280 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 KBTBD8Q8NFY9 601 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 OR10S1Q8NGN2 331 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 OR1J2Q8NGS2 313 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 OTOSQ8NHW6 89 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 SGCDQ92629 289 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 GGHQ92820 318 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 SPTSSAQ969W0 71 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 YIPF3Q9GZM5 350 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 ESRP2Q9H6T0 727 aaKnown RBP4.87□□□□□ -1.63
COPS3-208ENST00000486032 MARCH7Q9H992 704 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 UBTD1Q9HAC8 227 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 ELOVL3Q9HB03 270 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 CHCHD3Q9NX63 227 aaKnown RBP4.87□□□□□ -1.63
COPS3-208ENST00000486032 SLCO1C1Q9NYB5 712 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 UBAP1Q9NZ09 502 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 PTTG3PQ9NZH4 202 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 ERVK-18Q9QC07 812 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 EIF3KQ9UBQ5 218 aaKnown RBP4.87□□□□□ -1.63
COPS3-208ENST00000486032 CYB5R1Q9UHQ9 305 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 GNG8Q9UK08 70 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 FBXL3Q9UKT7 428 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 MYRFQ9Y2G1 1151 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 TPRKBQ9Y3C4 175 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 TMEM14AQ9Y6G1 99 aa4.87□□□□□ -1.63
COPS3-208ENST00000486032 SPTBN1Q01082 2364 aaKnown RBP4.87□□□□□ -1.63
COPS3-208ENST00000486032 HEATR1Q9H583 2144 aaKnown RBP4.87□□□□□ -1.63
COPS3-208ENST00000486032 CELSR2Q9HCU4 2923 aa4.86□□□□□ -1.63
COPS3-208ENST00000486032 CRYBG3Q68DQ2 2970 aa4.86□□□□□ -1.63
COPS3-208ENST00000486032 HRNRQ86YZ3 2850 aaPredicted RBP4.86□□□□□ -1.63
COPS3-208ENST00000486032 IGHV2OR16-5A0A0B4J2B6 119 aa4.86□□□□□ -1.63
COPS3-208ENST00000486032 IRGMA1A4Y4 181 aa4.86□□□□□ -1.63
COPS3-208ENST00000486032 OR6C6A6NF89 314 aa4.86□□□□□ -1.63
COPS3-208ENST00000486032 EFCAB10A6NFE3 127 aa4.86□□□□□ -1.63
COPS3-208ENST00000486032 A6NNC1 897 aa4.86□□□□□ -1.63
COPS3-208ENST00000486032 DEFB108AA8MXU0 73 aa4.86□□□□□ -1.63
COPS3-208ENST00000486032 PRR32B1ATL7 298 aa4.86□□□□□ -1.63
COPS3-208ENST00000486032 M0R135 149 aa4.86□□□□□ -1.63
COPS3-208ENST00000486032 PHYHO14832 338 aa4.86□□□□□ -1.63
COPS3-208ENST00000486032 DENRO43583 198 aaKnown RBP4.86□□□□□ -1.63
COPS3-208ENST00000486032 SYNGR3O43761 229 aa4.86□□□□□ -1.63
COPS3-208ENST00000486032 ATE1O95260 518 aa4.86□□□□□ -1.63
COPS3-208ENST00000486032 IGLV1-44P01699 117 aa4.86□□□□□ -1.63
COPS3-208ENST00000486032 LCATP04180 440 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms