RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 TRIP10Q15642 601 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 DNAL1Q4LDG9 190 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 SLC18B1Q6NT16 456 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 RFPL4BQ6ZWI9 263 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 ADGRG5Q8IZF4 528 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 ZNF283Q8N7M2 679 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 OR8G5Q8NG78 346 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 OR52E2Q8NGJ4 325 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 OR2T4Q8NH00 348 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 GIPC3Q8TF64 312 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 CANT1Q8WVQ1 401 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 RAB1CQ92928 201 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 CMBLQ96DG6 245 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 NRBF2Q96F24 287 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 LRGUKQ96M69 825 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 THTPAQ9BU02 230 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 RBM4Q9BWF3 364 aaKnown RBP5.94□□□□□ -1.46
VPS50-218ENST00000485994 CDADC1Q9BWV3 514 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 MMADHCQ9H3L0 296 aaPredicted RBP5.94□□□□□ -1.46
VPS50-218ENST00000485994 REEP1Q9H902 201 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 SAP30LQ9HAJ7 183 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 RPRD1BQ9NQG5 326 aaKnown RBP5.94□□□□□ -1.46
VPS50-218ENST00000485994 MRPL22Q9NWU5 206 aaKnown RBP5.94□□□□□ -1.46
VPS50-218ENST00000485994 TMEFF2Q9UIK5 374 aaPredicted RBP5.94□□□□□ -1.46
VPS50-218ENST00000485994 POLR3KQ9Y2Y1 108 aaPredicted RBP5.94□□□□□ -1.46
VPS50-218ENST00000485994 GRIP1Q9Y3R0 1128 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 STAB1Q9NY15 2570 aa5.94□□□□□ -1.46
VPS50-218ENST00000485994 PPIAL4EA0A075B759 164 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 TRAV20A0A0B4J274 112 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 PPIAL4CA0A0B4J2A2 164 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 TCRBV3S1A0A5B6 114 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 ZSCAN5BA6NJL1 495 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 IQCF6A8MYZ5 107 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 CLDN25C9JDP6 229 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 PPIAL4DF5H284 164 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 GYG2O15488 501 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 PPIHO43447 177 aaKnown RBP5.93□□□□□ -1.46
VPS50-218ENST00000485994 DEAF1O75398 565 aaPredicted RBP5.93□□□□□ -1.46
VPS50-218ENST00000485994 ATP5HO75947 161 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 ACSM4P0C7M7 580 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 PPIAL4FP0DN26 164 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 ANXA8P13928 327 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 SELEP16581 610 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 TNFSF4P23510 183 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 GATA3P23771 443 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 FMO3P31513 532 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 IL2RGP31785 369 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 GATA4P43694 442 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 RASSF2P50749 326 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 TPTEP56180 551 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 BNIP1Q12981 228 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 ZNF181Q2M3W8 571 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 CR1LQ2VPA4 569 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 ALKBH6Q3KRA9 238 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 FAM120AOSQ5T036 256 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 SPATA46Q5T0L3 261 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 SLC35F1Q5T1Q4 408 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 ACSM5Q6NUN0 579 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 Q6ZR03 302 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 USP51Q70EK9 711 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 PEG10Q86TG7 708 aaKnown RBP5.93□□□□□ -1.46
VPS50-218ENST00000485994 LRRC28Q86X40 367 aaPredicted RBP5.93□□□□□ -1.46
VPS50-218ENST00000485994 TEX29Q8N6K0 151 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 CELF2-AS1Q8N7Q2 184 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 AQP11Q8NBQ7 271 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 SLC37A3Q8NCC5 494 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 ICA1LQ8NDH6 482 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 OR2T33Q8NG76 320 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 OR9Q2Q8NGE9 314 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 OR8D4Q8NGM9 314 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 OR2AJ1Q8NGZ0 328 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 OR13G1Q8NGZ3 307 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 ITFG2Q969R8 447 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 ERGIC1Q969X5 290 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 TIMD4Q96H15 378 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 MDFIQ99750 246 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 ATF6BQ99941 703 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 SLC30A2Q9BRI3 323 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 TSSK6Q9BXA6 273 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 PLA2G12AQ9BZM1 189 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 OR51B6Q9H340 312 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 RERGLQ9H628 205 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 EGLN3Q9H6Z9 239 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 ZNF665Q9H7R5 613 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 YY1AP1Q9H869 796 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 MARCH7Q9H992 704 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 PNRC2Q9NPJ4 139 aaKnown RBP5.93□□□□□ -1.46
VPS50-218ENST00000485994 CMC2Q9NRP2 79 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 DDX28Q9NUL7 540 aaKnown RBP5.93□□□□□ -1.46
VPS50-218ENST00000485994 VNN3Q9NY84 501 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 SAMHD1Q9Y3Z3 626 aaKnown RBP5.93□□□□□ -1.46
VPS50-218ENST00000485994 WIPI2Q9Y4P8 454 aa5.93□□□□□ -1.46
VPS50-218ENST00000485994 A0A0A6YYJ9 748 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 DHRS12A0PJE2 317 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 FAM157AC9JC47 383 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 WNT9BO14905 357 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 GSC2O15499 205 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 SPRY3O43610 288 aa5.92□□□□□ -1.46
VPS50-218ENST00000485994 TIMM8AO60220 97 aaPredicted RBP5.92□□□□□ -1.46
VPS50-218ENST00000485994 DNAJC8O75937 253 aaPredicted RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms