RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 ITGB2P05107 769 aa13.31□□□□□ -0.28
TTC3-219ENST00000485402 CD1AP06126 327 aa13.31□□□□□ -0.28
TTC3-219ENST00000485402 CD226Q15762 336 aa13.31□□□□□ -0.28
TTC3-219ENST00000485402 MPPED2Q15777 294 aa13.31□□□□□ -0.28
TTC3-219ENST00000485402 TMEM200AQ86VY9 491 aa13.31□□□□□ -0.28
TTC3-219ENST00000485402 NUDCD2Q8WVJ2 157 aa13.31□□□□□ -0.28
TTC3-219ENST00000485402 C4orf45Q96LM5 186 aa13.31□□□□□ -0.28
TTC3-219ENST00000485402 CRB3Q9BUF7 120 aa13.31□□□□□ -0.28
TTC3-219ENST00000485402 ZNF629Q9UEG4 869 aaPredicted RBP13.31□□□□□ -0.28
TTC3-219ENST00000485402 MRPS18BQ9Y676 258 aaKnown RBP13.31□□□□□ -0.28
TTC3-219ENST00000485402 CFAP54Q96N23 3096 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 IGKV1D-42A0A075B6H8 117 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 CD2P06729 351 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 ZNF806P0C7X5 589 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 CASRP41180 1078 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 CBX5P45973 191 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 DMRTC1Q5HYR2 192 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 RAB11FIP2Q7L804 512 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 RABEPKQ7Z6M1 372 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 D2HGDHQ8N465 521 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 GPX8Q8TED1 209 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 BARX1Q9HBU1 254 aaPredicted RBP13.3□□□□□ -0.28
TTC3-219ENST00000485402 FANCFQ9NPI8 374 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 RNF222A6NCQ9 220 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 ABHD16AO95870 558 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 SPP1P10451 314 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 PI3P19957 117 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 GNALP38405 381 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 RAB13P51153 203 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 ZNF74Q16587 644 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 LINC00114Q6XXX2 140 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 CDC20BQ86Y33 519 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 BCORP1Q8N888 145 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 C16orf52Q8NHV5 167 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 METTL21AQ8WXB1 218 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 TSPAN32Q96QS1 320 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 SLC22A11Q9NSA0 550 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 CENPMQ9NSP4 180 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 MKL2Q9ULH7 1088 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 SLC17A2O00624 439 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 EIF4E2O60573 245 aaKnown RBP13.3□□□□□ -0.28
TTC3-219ENST00000485402 OR2F2O95006 317 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 ACTL6AO96019 429 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 IFNA6P05013 189 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 EIF1AXP47813 144 aaKnown RBP13.3□□□□□ -0.28
TTC3-219ENST00000485402 NPBWR1P48145 328 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 OR2F1Q13607 317 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 ELP5Q8TE02 316 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 NAT6Q93015 286 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 SLC41A2Q96JW4 573 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 SLC25A21Q9BQT8 299 aaPredicted RBP13.3□□□□□ -0.28
TTC3-219ENST00000485402 IFT22Q9H7X7 185 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 VSIG4Q9Y279 399 aa13.3□□□□□ -0.28
TTC3-219ENST00000485402 MPTX1A8MV57 137 aa13.29□□□□□ -0.28
TTC3-219ENST00000485402 YKT6O15498 198 aa13.29□□□□□ -0.28
TTC3-219ENST00000485402 MPZL1O95297 269 aa13.29□□□□□ -0.28
TTC3-219ENST00000485402 ERCC1P07992 297 aaPredicted RBP13.29□□□□□ -0.28
TTC3-219ENST00000485402 SLC35E2P0CK97 266 aa13.29□□□□□ -0.28
TTC3-219ENST00000485402 ADCYAP1P18509 176 aa13.29□□□□□ -0.28
TTC3-219ENST00000485402 RASGEF1BQ0VAM2 473 aa13.29□□□□□ -0.28
TTC3-219ENST00000485402 PDZK1IP1Q13113 114 aa13.29□□□□□ -0.28
TTC3-219ENST00000485402 PEAR1Q5VY43 1037 aaPredicted RBP13.29□□□□□ -0.28
TTC3-219ENST00000485402 LILRB1Q8NHL6 650 aaPredicted RBP13.29□□□□□ -0.28
TTC3-219ENST00000485402 ROBO4Q8WZ75 1007 aa13.29□□□□□ -0.28
TTC3-219ENST00000485402 ZNF285Q96NJ3 590 aa13.29□□□□□ -0.28
TTC3-219ENST00000485402 DGAT2Q96PD7 388 aa13.29□□□□□ -0.28
TTC3-219ENST00000485402 OR6C1Q96RD1 312 aa13.29□□□□□ -0.28
TTC3-219ENST00000485402 GAL3ST4Q96RP7 486 aa13.29□□□□□ -0.28
TTC3-219ENST00000485402 TACR3P29371 465 aa13.29□□□□□ -0.28
TTC3-219ENST00000485402 FOXL2P58012 376 aa13.29□□□□□ -0.28
TTC3-219ENST00000485402 GPR85P60893 370 aa13.29□□□□□ -0.28
TTC3-219ENST00000485402 PMPCAQ10713 525 aa13.29□□□□□ -0.28
TTC3-219ENST00000485402 NKAPLQ5M9Q1 402 aa13.29□□□□□ -0.28
TTC3-219ENST00000485402 PAPD4Q6PIY7 484 aaKnown RBP13.29□□□□□ -0.28
TTC3-219ENST00000485402 SHISA6Q6ZSJ9 500 aa13.29□□□□□ -0.28
TTC3-219ENST00000485402 MED25Q71SY5 747 aa13.29□□□□□ -0.28
TTC3-219ENST00000485402 CSAG2Q9Y5P2 127 aa13.29□□□□□ -0.28
TTC3-219ENST00000485402 TGFBR3LH3BV60 316 aa13.28□□□□□ -0.28
TTC3-219ENST00000485402 LMX1BO60663 402 aa13.28□□□□□ -0.28
TTC3-219ENST00000485402 CRYBA1P05813 215 aa13.28□□□□□ -0.28
TTC3-219ENST00000485402 MFGE8Q08431 387 aaPredicted RBP13.28□□□□□ -0.28
TTC3-219ENST00000485402 RIPPLY1Q0D2K3 151 aa13.28□□□□□ -0.28
TTC3-219ENST00000485402 VWA2Q5GFL6 755 aa13.28□□□□□ -0.28
TTC3-219ENST00000485402 TMEM225Q6GV28 225 aa13.28□□□□□ -0.28
TTC3-219ENST00000485402 TMPPEQ6ZT21 453 aa13.28□□□□□ -0.28
TTC3-219ENST00000485402 ZNF595Q8IYB9 648 aa13.28□□□□□ -0.28
TTC3-219ENST00000485402 ZSCAN1Q8NBB4 408 aa13.28□□□□□ -0.28
TTC3-219ENST00000485402 OR13C8Q8NGS7 320 aa13.28□□□□□ -0.28
TTC3-219ENST00000485402 NANPQ8TBE9 248 aa13.28□□□□□ -0.28
TTC3-219ENST00000485402 RHBDD1Q8TEB9 315 aa13.28□□□□□ -0.28
TTC3-219ENST00000485402 CTHRC1Q96CG8 243 aa13.28□□□□□ -0.28
TTC3-219ENST00000485402 MMP25Q9NPA2 562 aa13.28□□□□□ -0.28
TTC3-219ENST00000485402 NDRG3Q9UGV2 375 aa13.28□□□□□ -0.28
TTC3-219ENST00000485402 TNRC6BQ9UPQ9 1833 aaKnown RBP13.28□□□□□ -0.28
TTC3-219ENST00000485402 IGHV5-10-1A0A0J9YXX1 117 aa13.28□□□□□ -0.28
TTC3-219ENST00000485402 OR2T1O43869 369 aa13.28□□□□□ -0.28
TTC3-219ENST00000485402 ADAD2Q8NCV1 583 aaKnown RBP13.28□□□□□ -0.28
TTC3-219ENST00000485402 ZNF524Q96C55 264 aa13.28□□□□□ -0.28
TTC3-219ENST00000485402 FOXRED1Q96CU9 486 aaPredicted RBP13.28□□□□□ -0.28
TTC3-219ENST00000485402 CNTNAP3BQ96NU0 1288 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms