RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 SELEP16581 610 aa16.1■□□□□ 0.17
COL27A1-205ENST00000485397 PMELP40967 661 aa16.1■□□□□ 0.17
COL27A1-205ENST00000485397 SRP9P49458 86 aaKnown RBP16.1■□□□□ 0.17
COL27A1-205ENST00000485397 RPS6KA3P51812 740 aa16.1■□□□□ 0.17
COL27A1-205ENST00000485397 RSPO1Q2MKA7 263 aaPredicted RBP16.1■□□□□ 0.17
COL27A1-205ENST00000485397 PARP8Q8N3A8 854 aa16.1■□□□□ 0.17
COL27A1-205ENST00000485397 BHLHE23Q8NDY6 225 aa16.1■□□□□ 0.17
COL27A1-205ENST00000485397 GJC3Q8NFK1 279 aa16.1■□□□□ 0.17
COL27A1-205ENST00000485397 OR52J3Q8NH60 311 aa16.1■□□□□ 0.17
COL27A1-205ENST00000485397 TMEM246Q9BRR3 403 aa16.1■□□□□ 0.17
COL27A1-205ENST00000485397 ZMAT3Q9HA38 289 aaKnown RBP16.1■□□□□ 0.17
COL27A1-205ENST00000485397 SRA1Q9HD15 236 aaKnown RBP16.1■□□□□ 0.17
COL27A1-205ENST00000485397 RPS6KA6Q9UK32 745 aa16.1■□□□□ 0.17
COL27A1-205ENST00000485397 B9D1Q9UPM9 204 aa16.1■□□□□ 0.17
COL27A1-205ENST00000485397 IGLV1-36A0A0B4J1U3 117 aa16.09■□□□□ 0.17
COL27A1-205ENST00000485397 IQCF6A8MYZ5 107 aa16.09■□□□□ 0.17
COL27A1-205ENST00000485397 HLA-DPB1P04440 258 aa16.09■□□□□ 0.17
COL27A1-205ENST00000485397 RNASE1P07998 156 aaKnown RBP16.09■□□□□ 0.17
COL27A1-205ENST00000485397 RHCEP18577 417 aa16.09■□□□□ 0.17
COL27A1-205ENST00000485397 NUDT2P50583 147 aa16.09■□□□□ 0.17
COL27A1-205ENST00000485397 GNB2P62879 340 aa16.09■□□□□ 0.17
COL27A1-205ENST00000485397 SLC9A3R2Q15599 337 aa16.09■□□□□ 0.17
COL27A1-205ENST00000485397 PRR31Q5SQ13 230 aa16.09■□□□□ 0.17
COL27A1-205ENST00000485397 BTNL3Q6UXE8 466 aa16.09■□□□□ 0.17
COL27A1-205ENST00000485397 LRRN1Q6UXK5 716 aa16.09■□□□□ 0.17
COL27A1-205ENST00000485397 FAM86B1Q8N7N1 296 aa16.09■□□□□ 0.17
COL27A1-205ENST00000485397 C7orf34Q96L11 122 aa16.09■□□□□ 0.17
COL27A1-205ENST00000485397 ERMAPQ96PL5 475 aaPredicted RBP16.09■□□□□ 0.17
COL27A1-205ENST00000485397 HDHD2Q9H0R4 259 aa16.09■□□□□ 0.17
COL27A1-205ENST00000485397 UNKLQ9H9P5 680 aaKnown RBP16.09■□□□□ 0.17
COL27A1-205ENST00000485397 MIOXQ9UGB7 285 aa16.09■□□□□ 0.17
COL27A1-205ENST00000485397 IGHV2-70DA0A0C4DH43 119 aa16.08■□□□□ 0.16
COL27A1-205ENST00000485397 CCDC22O60826 627 aa16.08■□□□□ 0.16
COL27A1-205ENST00000485397 CRABP1P29762 137 aa16.08■□□□□ 0.16
COL27A1-205ENST00000485397 PSME3P61289 254 aa16.08■□□□□ 0.16
COL27A1-205ENST00000485397 GLYATQ6IB77 296 aa16.08■□□□□ 0.16
COL27A1-205ENST00000485397 LEG1Q6P5S2 330 aa16.08■□□□□ 0.16
COL27A1-205ENST00000485397 DNM1P34Q6PK57 102 aa16.08■□□□□ 0.16
COL27A1-205ENST00000485397 SMARCD3Q6STE5 483 aa16.08■□□□□ 0.16
COL27A1-205ENST00000485397 HACD2Q6Y1H2 254 aa16.08■□□□□ 0.16
COL27A1-205ENST00000485397 LINC00346Q8IVM7 164 aa16.08■□□□□ 0.16
COL27A1-205ENST00000485397 OR6V1Q8N148 313 aa16.08■□□□□ 0.16
COL27A1-205ENST00000485397 RAB40AQ8WXH6 277 aa16.08■□□□□ 0.16
COL27A1-205ENST00000485397 DACT3Q96B18 629 aaPredicted RBP16.08■□□□□ 0.16
COL27A1-205ENST00000485397 UPRTQ96BW1 309 aa16.08■□□□□ 0.16
COL27A1-205ENST00000485397 NEIL1Q96FI4 390 aaPredicted RBP16.08■□□□□ 0.16
COL27A1-205ENST00000485397 NMNAT3Q96T66 252 aa16.08■□□□□ 0.16
COL27A1-205ENST00000485397 FUZQ9BT04 418 aa16.08■□□□□ 0.16
COL27A1-205ENST00000485397 CCDC134Q9H6E4 229 aa16.08■□□□□ 0.16
COL27A1-205ENST00000485397 ZNF696Q9H7X3 374 aa16.08■□□□□ 0.16
COL27A1-205ENST00000485397 TMEM100Q9NV29 134 aa16.08■□□□□ 0.16
COL27A1-205ENST00000485397 ABCD2Q9UBJ2 740 aa16.08■□□□□ 0.16
COL27A1-205ENST00000485397 MDFIC2A0A1B0GVS7 189 aa16.07■□□□□ 0.16
COL27A1-205ENST00000485397 CPT2P23786 658 aa16.07■□□□□ 0.16
COL27A1-205ENST00000485397 FPR3P25089 353 aa16.07■□□□□ 0.16
COL27A1-205ENST00000485397 COX10Q12887 443 aa16.07■□□□□ 0.16
COL27A1-205ENST00000485397 ZNF181Q2M3W8 571 aa16.07■□□□□ 0.16
COL27A1-205ENST00000485397 KRTAP27-1Q3LI81 207 aa16.07■□□□□ 0.16
COL27A1-205ENST00000485397 ZNF404Q494X3 552 aa16.07■□□□□ 0.16
COL27A1-205ENST00000485397 PGM2L1Q6PCE3 622 aa16.07■□□□□ 0.16
COL27A1-205ENST00000485397 CFAP77Q6ZQR2 320 aa16.07■□□□□ 0.16
COL27A1-205ENST00000485397 COLCA1Q6ZS62 124 aa16.07■□□□□ 0.16
COL27A1-205ENST00000485397 NAA40Q86UY6 237 aa16.07■□□□□ 0.16
COL27A1-205ENST00000485397 OR4K13Q8NH42 304 aa16.07■□□□□ 0.16
COL27A1-205ENST00000485397 SLC25A28Q96A46 364 aa16.07■□□□□ 0.16
COL27A1-205ENST00000485397 DHRS1Q96LJ7 313 aa16.07■□□□□ 0.16
COL27A1-205ENST00000485397 DCAF13Q9NV06 445 aaKnown RBP16.07■□□□□ 0.16
COL27A1-205ENST00000485397 TRAV40A0A0B4J280 105 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 KIR2DS1A0A191URI9 304 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 LRRC30A6NM36 301 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 F5H5K5 113 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 CLDN34H7C241 214 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 NDUFAB1O14561 156 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 PLATP00750 562 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 ACSM4P0C7M7 580 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 PPIAL4GP0DN37 164 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 MDH1P40925 334 aaKnown RBP16.06■□□□□ 0.16
COL27A1-205ENST00000485397 MTNR1AP48039 350 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 MAB21L1Q13394 359 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 RFX4Q33E94 735 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 SLC18B1Q6NT16 456 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 LYPD2Q6UXB3 125 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 C9orf139Q6ZV77 190 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 C19orf18Q8NEA5 215 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 SLC26A10Q8NG04 563 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 OR8B3Q8NGG8 313 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 FANK1Q8TC84 345 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 PLEKHA8Q96JA3 519 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 OR8B2Q96RD0 313 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 PITX2Q99697 317 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 HCAR1Q9BXC0 346 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 OR52D1Q9H346 318 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 KRCC1Q9NPI7 259 aaPredicted RBP16.06■□□□□ 0.16
COL27A1-205ENST00000485397 V9GYQ6 96 aa16.06■□□□□ 0.16
COL27A1-205ENST00000485397 A0A1B0GWJ7 208 aa16.05■□□□□ 0.16
COL27A1-205ENST00000485397 RENP00797 406 aa16.05■□□□□ 0.16
COL27A1-205ENST00000485397 HIST1H1CP16403 213 aaKnown RBP16.05■□□□□ 0.16
COL27A1-205ENST00000485397 PITPNBP48739 271 aa16.05■□□□□ 0.16
COL27A1-205ENST00000485397 HOXA4Q00056 320 aaPredicted RBP16.05■□□□□ 0.16
COL27A1-205ENST00000485397 GK2Q14410 553 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms