RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, human

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR3-210	ENST00000484596	XPO6	Q96QU8	1125 aa	Known RBP	4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	SRMS	Q9H3Y6	488 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	C8orf33	Q9H7E9	229 aa	Predicted RBP	4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	CYP3A43	Q9HB55	503 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	HRASLS2	Q9NWW9	162 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	ANAPC11	Q9NYG5	84 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	CHMP5	Q9NZZ3	219 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	CLCF1	Q9UBD9	225 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	TRMT112	Q9UI30	125 aa	Known RBP	4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	SLC25A15	Q9Y619	301 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	MYO3B	Q8WXR4	1341 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	MAPK8IP3	Q9UPT6	1336 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	MED23	Q9ULK4	1368 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	KCNE1B	A0A087WTH5	132 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596		A0A0G2JLM5	398 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596		H0Y9J4	135 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	EIF4E2	O60573	245 aa	Known RBP	4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	CSTA	P01040	98 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	SERPINA5	P05154	406 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	IVL	P07476	585 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	CD1E	P15812	388 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	TUBG1	P23258	451 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	RORC	P51449	518 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	TIMM10	P62072	90 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	DOCK1	Q14185	1865 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	SF3A2	Q15428	464 aa	Known RBP	4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	BEX5	Q5H9J7	111 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	OR52W1	Q6IF63	320 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	C6orf89	Q6UWU4	347 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	RFLNA	Q6ZTI6	216 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	TCAIM	Q8N3R3	496 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	TTC29	Q8NA56	475 aa	Predicted RBP	4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	HSD17B11	Q8NBQ5	300 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	OR9G4	Q8NGQ1	327 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	LYPD6B	Q8NI32	183 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	ANKRD7	Q92527	254 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	TMEM54	Q969K7	222 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	KIAA1143	Q96AT1	154 aa	Predicted RBP	4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	OR51J1	Q9H342	316 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	RGCC	Q9H4X1	137 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	SPACA1	Q9HBV2	294 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	PXMP2	Q9NR77	195 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	TUBG2	Q9NRH3	451 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	PLSCR3	Q9NRY6	295 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	XCL2	Q9UBD3	114 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	MYH2	Q9UKX2	1941 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	SLC17A4	Q9Y2C5	497 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	GOLT1B	Q9Y3E0	138 aa		4.59	□□□□□ -1.67
UBR3-210	ENST00000484596	LOC285556	D6RIA3	1793 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	COL1A1	P02452	1464 aa	Predicted RBP	4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	USP27X	A6NNY8	438 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	ZNF879	B4DU55	563 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	EMC8	O43402	210 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	MMP23A	O75900	390 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	CCNB2	O95067	398 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	PCCA	P05165	728 aa	Predicted RBP	4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	ICAM2	P13598	275 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	PRKACA	P17612	351 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	MSR1	P21757	451 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	RPS12	P25398	132 aa	Known RBP	4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	CD1B	P29016	333 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	DRD3	P35462	400 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	AQP2	P41181	271 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	SLC1A2	P43004	574 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	MYL6	P60660	151 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	PRPS1	P60891	318 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	GPNMB	Q14956	572 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	NRF1	Q16656	503 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	CCDC14	Q49A88	953 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	CASC10	Q5T4H9	136 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	DEGS2	Q6QHC5	323 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	PNKD	Q8N490	385 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	ZADH2	Q8N4Q0	377 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	CSGALNACT2	Q8N6G5	542 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596		Q8N7P7	452 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	SDR42E1	Q8WUS8	393 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	MTCH1	Q9NZJ7	389 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	GNPTG	Q9UJJ9	305 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	CDH10	Q9Y6N8	788 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	CHD7	Q9P2D1	2997 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	CHD9	Q3L8U1	2897 aa		4.58	□□□□□ -1.68
UBR3-210	ENST00000484596	GLYATL1P3	A0A0U1RQE8	302 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	LOC100506127	A0A0U1RQW1	187 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	FAM231B	A6NCW3	169 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	ZNF726	A6NNF4	738 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596		M0R3G1	203 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	TRDMT1	O14717	391 aa	Known RBP	4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	YKT6	O15498	198 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	AIRE	O43918	545 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	PLEK	P08567	350 aa	Predicted RBP	4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	UBC	P0CG48	685 aa	Known RBP	4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	ELK1	P19419	428 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	U2AF2	P26368	475 aa	Known RBP eCLIP	4.57	□□□□□ -1.68	9e-7	■□□□□ 9.8
UBR3-210	ENST00000484596	CRISP1	P54107	249 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	DAOA	P59103	153 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	XRCC4	Q13426	336 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	KIAA0087	Q14695	138 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596		Q3ZCU0	254 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	CTRB2	Q6GPI1	263 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	PEX26	Q7Z412	305 aa		4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms