RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 COMMD3Q9UBI1 195 aa6.11□□□□□ -1.43
BRCA1-216ENST00000484087 ANKRD17O75179 2603 aaKnown RBP6.1□□□□□ -1.43
BRCA1-216ENST00000484087 ZNF469Q96JG9 3925 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-216ENST00000484087 TRAV1-2A0A0B4J238 106 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 A0A0J9YW62 118 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 SLC35F4A4IF30 521 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 FABP12A6NFH5 140 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 AHRRA9YTQ3 701 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 EREGO14944 169 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 MAGEB4O15481 346 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-216ENST00000484087 TBX1O43435 398 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 CXCL13O43927 109 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 ZNF254O75437 659 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 SC5DO75845 299 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 APOA1P02647 267 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 TMIGD3P0DMS9 266 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-216ENST00000484087 IGFBP2P18065 325 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 AGAP20933 346 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 ENPP1P22413 925 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 CEACAM8P31997 349 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-216ENST00000484087 TNFSF8P32971 234 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 TALDO1P37837 337 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 CAMK2DQ13557 499 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 SLC17A1Q14916 467 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 POU4F3Q15319 338 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 MEP1BQ16820 701 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 TEX30Q5JUR7 227 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 ZNF684Q5T5D7 378 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 IDNKQ5T6J7 187 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 HBMQ6B0K9 141 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 DEGS2Q6QHC5 323 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 KLHL24Q6TFL4 600 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 METAP1DQ6UB28 335 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-216ENST00000484087 FAM131AQ6UXB0 335 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.1□□□□□ -1.43
BRCA1-216ENST00000484087 P4HA3Q7Z4N8 544 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 ADGRE4PQ86SQ3 457 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 CCDC190Q86UF4 302 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-216ENST00000484087 CNEP1R1Q8N9A8 125 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 NOXO1Q8NFA2 376 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 OR52N5Q8NH56 324 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 GPR148Q8TDV2 347 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 TXNDC15Q96J42 360 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 COX4I2Q96KJ9 171 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 PDCD1LG2Q9BQ51 273 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 EMC6Q9BV81 110 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 SRXN1Q9BYN0 137 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 OPN3Q9H1Y3 402 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-216ENST00000484087 ELOVL3Q9HB03 270 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 TCF7L1Q9HCS4 588 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 ABCB9Q9NP78 766 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 KCNJ16Q9NPI9 418 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 ABCB10Q9NRK6 738 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 B3GAT1Q9P2W7 334 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 MRM2Q9UI43 246 aaKnown RBP6.1□□□□□ -1.43
BRCA1-216ENST00000484087 KCNG2Q9UJ96 466 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 POLR1DQ9Y2S0 133 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 UGT2A1Q9Y4X1 527 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 FREM1Q5H8C1 2179 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 AKAP6Q13023 2319 aa6.1□□□□□ -1.43
BRCA1-216ENST00000484087 KRTAP9-6A0A140TA67 174 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 A0A1W2PPL8 197 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 SMIM30A4D0T7 59 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 SLC22A20A6NK97 555 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 NOTOA8MTQ0 251 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 FAM25AB3EWG3 89 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 FAM25CB3EWG5 89 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 FAM25GB3EWG6 89 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 TRAF3IP2O43734 574 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-216ENST00000484087 PFDN1O60925 122 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 UPK3AO75631 287 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 TNFSF13O75888 250 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 GPANK1O95872 356 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 RAF1P04049 648 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 UCHL1P09936 223 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 H2BFMP0C1H6 154 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 CPN1P15169 458 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 PTBP1P26599 531 aaKnown RBP eCLIP6.09□□□□□ -1.431e-7■■■■■ 45.2
BRCA1-216ENST00000484087 LAP3P28838 519 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 RPS27P42677 84 aaKnown RBP6.09□□□□□ -1.43
BRCA1-216ENST00000484087 CSNK1A1P48729 337 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 P2RY4P51582 365 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 PSMD7P51665 324 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 CCR9P51686 369 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 CAV3P56539 151 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 CLDN17P56750 224 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 CARD18P57730 90 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 RAC3P60763 192 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 H3F3AP84243 136 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 ROM1Q03395 351 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 TLE4Q04727 773 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 FMODQ06828 376 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 INSL4Q14641 139 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 ETFDHQ16134 617 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 Q499Y3 187 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 SFXN4Q6P4A7 337 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 LRRN1Q6UXK5 716 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 LAX1Q8IWV1 398 aa6.09□□□□□ -1.43
BRCA1-216ENST00000484087 OR8H2Q8N162 312 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms