RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 B8ZZF3 427 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 H3BMQ9 156 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 ZNF701M0R085 212 aaPredicted RBP7.17□□□□□ -1.26
USP4-210ENST00000483212 DVL2O14641 736 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 GPRIN2O60269 458 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 IGLV3-1P01715 115 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 TTRP02766 147 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 PRB1P04280 392 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 ACSM4P0C7M7 580 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 ZNF14P17017 642 aaPredicted RBP7.17□□□□□ -1.26
USP4-210ENST00000483212 NR4A1P22736 598 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 GNLYP22749 145 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 ARR3P36575 388 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 CX3CR1P49238 355 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 GDI2P50395 445 aaKnown RBP7.17□□□□□ -1.26
USP4-210ENST00000483212 PRKXP51817 358 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 TMBIM6P55061 237 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 RAB1AP62820 205 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 FABP5Q01469 135 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 SLC3A1Q07837 685 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 ECH1Q13011 328 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 INSL4Q14641 139 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 CDSNQ15517 529 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 IGFBP7Q16270 282 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 GSG1Q2KHT4 349 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 ZNF829Q3KNS6 432 aaPredicted RBP7.17□□□□□ -1.26
USP4-210ENST00000483212 FBXL19-AS1Q494R0 122 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 SEZ6L2Q6UXD5 910 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 TMEM91Q6ZNR0 172 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 COLCA1Q6ZS62 124 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 BHLHA15Q7RTS1 189 aaPredicted RBP7.17□□□□□ -1.26
USP4-210ENST00000483212 NAA40Q86UY6 237 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 MDP1Q86V88 176 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 MYPOPQ86VE0 399 aaPredicted RBP7.17□□□□□ -1.26
USP4-210ENST00000483212 CCDC36Q8IYA8 594 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 ZNF843Q8N446 348 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 OR13C5Q8NGS8 318 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 NANOS1Q8WY41 292 aaKnown RBP7.17□□□□□ -1.26
USP4-210ENST00000483212 GHSRQ92847 366 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 CCDC120Q96HB5 630 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 POM121L2Q96KW2 1035 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 PDCD1LG2Q9BQ51 273 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 BCL7BQ9BQE9 202 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 KCNN2Q9H2S1 579 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 MOB1AQ9H8S9 216 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 OBP2BQ9NPH6 170 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 ELOVL5Q9NYP7 299 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 ZNF319Q9P2F9 582 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 CRNNQ9UBG3 495 aaPredicted RBP7.17□□□□□ -1.26
USP4-210ENST00000483212 RSL24D1Q9UHA3 163 aaKnown RBP7.17□□□□□ -1.26
USP4-210ENST00000483212 NUFIP1Q9UHK0 495 aaKnown RBP7.17□□□□□ -1.26
USP4-210ENST00000483212 STUB1Q9UNE7 303 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 SLC22A13Q9Y226 551 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 SLC25A15Q9Y619 301 aa7.17□□□□□ -1.26
USP4-210ENST00000483212 RP1L1Q8IWN7 2480 aaPredicted RBP7.17□□□□□ -1.26
USP4-210ENST00000483212 COL6A6A6NMZ7 2263 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 TRBV2A0A0J9YWF9 115 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 TRBV5-5A0A0J9YX44 114 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 TMEM269A0A1B0GVZ9 245 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 TRDV1A0A1B0GX56 115 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 A0A1W2PR80 420 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 EEF1E1-BLOC1S5C9J1V9 151 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 LOC110117498-PIK3R3F6TDL0 507 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 M0R135 149 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 EEF1E1O43324 174 aaKnown RBP7.16□□□□□ -1.26
USP4-210ENST00000483212 AIREO43918 545 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 IGKV3-15P01624 115 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 IGLV1-44P01699 117 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 ISG15P05161 165 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 CELA3BP08861 270 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 SLC2A1P11166 492 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 CD79AP11912 226 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 CBR1P16152 277 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 GALP22466 123 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 APEX1P27695 318 aaKnown RBP7.16□□□□□ -1.26
USP4-210ENST00000483212 HSD11B1P28845 292 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 CHRNB4P30926 498 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 FGF9P31371 208 aaPredicted RBP7.16□□□□□ -1.26
USP4-210ENST00000483212 TGFBR1P36897 503 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 HTR5AP47898 357 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 ZNF121P58317 390 aaPredicted RBP7.16□□□□□ -1.26
USP4-210ENST00000483212 FAM27E3Q08E93 113 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 TIMM23BQ5SRD1 257 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 TMEM53Q6P2H8 277 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 DRAM2Q6UX65 266 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 UNQ9370/PRO34162Q6UXP9 181 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 GDPGP1Q6ZNW5 385 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 Q6ZSR3 168 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 C22orf34Q6ZV56 151 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 FJX1Q86VR8 437 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.16□□□□□ -1.26
USP4-210ENST00000483212 ELMOD2Q8IZ81 293 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 FAM169BQ8N8A8 192 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 OR8B12Q8NGG6 310 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 OR10AC1Q8NH08 325 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 ABHD4Q8TB40 342 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 RAB2BQ8WUD1 216 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 TMEM203Q969S6 136 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 S100PBPQ96BU1 408 aa7.16□□□□□ -1.26
USP4-210ENST00000483212 C12orf43Q96C57 262 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms