RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 RAP1BP61224 184 aa6.14□□□□□ -1.43
CSDE1-206ENST00000483030 RAP1AP62834 184 aa6.14□□□□□ -1.43
CSDE1-206ENST00000483030 NFYCQ13952 458 aa6.14□□□□□ -1.43
CSDE1-206ENST00000483030 VMACQ2NL98 169 aa6.14□□□□□ -1.43
CSDE1-206ENST00000483030 ZNF404Q494X3 552 aa6.14□□□□□ -1.43
CSDE1-206ENST00000483030 LCE2AQ5TA79 106 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-206ENST00000483030 ZNF841Q6ZN19 808 aa6.14□□□□□ -1.43
CSDE1-206ENST00000483030 LILRB2Q8N423 598 aa6.14□□□□□ -1.43
CSDE1-206ENST00000483030 C19orf18Q8NEA5 215 aa6.14□□□□□ -1.43
CSDE1-206ENST00000483030 OR8G5Q8NG78 346 aa6.14□□□□□ -1.43
CSDE1-206ENST00000483030 LINC01006Q8NI28 216 aa6.14□□□□□ -1.43
CSDE1-206ENST00000483030 FAM110DQ8TAY7 271 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-206ENST00000483030 C10orf82Q8WW14 230 aa6.14□□□□□ -1.43
CSDE1-206ENST00000483030 BPIFA2Q96DR5 249 aa6.14□□□□□ -1.43
CSDE1-206ENST00000483030 COG8Q96MW5 612 aa6.14□□□□□ -1.43
CSDE1-206ENST00000483030 ZNF582Q96NG8 517 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-206ENST00000483030 WACQ9BTA9 647 aa6.14□□□□□ -1.43
CSDE1-206ENST00000483030 RABEP2Q9H5N1 569 aa6.14□□□□□ -1.43
CSDE1-206ENST00000483030 TCF7L1Q9HCS4 588 aa6.14□□□□□ -1.43
CSDE1-206ENST00000483030 PTTG3PQ9NZH4 202 aa6.14□□□□□ -1.43
CSDE1-206ENST00000483030 ASH2LQ9UBL3 628 aa6.14□□□□□ -1.43
CSDE1-206ENST00000483030 BAG5Q9UL15 447 aa6.14□□□□□ -1.43
CSDE1-206ENST00000483030 POMT1Q9Y6A1 747 aa6.14□□□□□ -1.43
CSDE1-206ENST00000483030 PRKDCP78527 4128 aaKnown RBP6.13□□□□□ -1.43
CSDE1-206ENST00000483030 CENPVL3A0A0U1RRI6 287 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 OR6C6A6NF89 314 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 PRSS47A8MTI9 375 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 FBP2O00757 339 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 PHYHO14832 338 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 MLNRO43193 412 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 ENSAO43768 121 aaKnown RBP6.13□□□□□ -1.43
CSDE1-206ENST00000483030 GPR137BO60478 399 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 CLPXO76031 633 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 TOX4O94842 621 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 FSTL3O95633 263 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 IGHV4-59P01825 116 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 HLA-DPB1P04440 258 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 IRF2P14316 349 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 FUT4P22083 530 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 CFHR2P36980 270 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 PROK1P58294 105 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 ST3GAL3Q11203 375 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 FHL1Q13642 323 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 ZNF181Q2M3W8 571 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 FBLN7Q53RD9 439 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 FBXW12Q6X9E4 464 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 DCDC5Q6ZRR9 648 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 OAFQ86UD1 273 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 C1orf87Q8N0U7 546 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 PCYOX1LQ8NBM8 494 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 BHLHE23Q8NDY6 225 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 OR5L1Q8NGL2 311 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 OR1F12Q8NHA8 337 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 TBC1D15Q8TC07 691 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 LRRC8CQ8TDW0 803 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 SSMEM1Q8WWF3 244 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 DYRK2Q92630 601 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 TLCD1Q96CP7 247 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 RASD2Q96D21 266 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 ANAPC16Q96DE5 110 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 Q96M85 177 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 POLR2J2Q9GZM3 115 aaKnown RBP6.13□□□□□ -1.43
CSDE1-206ENST00000483030 POLR2J3Q9H1A7 115 aaKnown RBP6.13□□□□□ -1.43
CSDE1-206ENST00000483030 RERGLQ9H628 205 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 WDR76Q9H967 626 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 TMBIM4Q9HC24 238 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 ACOXLQ9NUZ1 547 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 TMEM100Q9NV29 134 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 KIF17Q9P2E2 1029 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 GRHPRQ9UBQ7 328 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 RAB21Q9UL25 225 aa6.13□□□□□ -1.43
CSDE1-206ENST00000483030 HTR3EA5X5Y0 456 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 EFCAB9A8MZ26 197 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 ZNF879B4DU55 563 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 P2RY10O00398 339 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 XKRYO14609 159 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 RER1O15258 196 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 LIPFP07098 398 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 MMP9P14780 707 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 CTLA4P16410 223 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 FPR3P25089 353 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 RPL4P36578 427 aaKnown RBP6.12□□□□□ -1.43
CSDE1-206ENST00000483030 PSMB10P40306 273 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 YAP1P46937 504 aaKnown RBP6.12□□□□□ -1.43
CSDE1-206ENST00000483030 RGS6P49758 472 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 RPL15P61313 204 aaKnown RBP6.12□□□□□ -1.43
CSDE1-206ENST00000483030 HOXA4Q00056 320 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-206ENST00000483030 MAB21L1Q13394 359 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 AQP6Q13520 282 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 RABL3Q5HYI8 236 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 CD276Q5ZPR3 534 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 NANOGP8Q6NSW7 305 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 CALHM3Q86XJ0 350 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 NRMQ8IXM6 262 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 BOLLQ8N9W6 283 aaKnown RBP6.12□□□□□ -1.43
CSDE1-206ENST00000483030 OR13C2Q8NGS9 318 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 OR11L1Q8NGX0 322 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 GATAD2BQ8WXI9 593 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 LHX4Q969G2 390 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 APOBEC3DQ96AK3 386 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms