RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 GPR119Q8TDV5 335 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 TMEM171Q8WVE6 324 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 NSMAFQ92636 917 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 TAAR8Q969N4 342 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 DDIT4LQ96D03 193 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 Q96M85 177 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 MARVELD1Q9BSK0 173 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 THAP7Q9BT49 309 aaPredicted RBP6.87□□□□□ -1.31
SNX13-208ENST00000482558 WACQ9BTA9 647 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 POTEKPQ9BYX7 375 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 RTN4RQ9BZR6 473 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 HDHD2Q9H0R4 259 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 LRRN3Q9H3W5 708 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 WDR54Q9H977 334 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 VSX1Q9NZR4 365 aaPredicted RBP6.87□□□□□ -1.31
SNX13-208ENST00000482558 PISDQ9UG56 409 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 TMED7Q9Y3B3 224 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 CEP192Q8TEP8 1941 aa6.87□□□□□ -1.31
SNX13-208ENST00000482558 SPAG17Q6Q759 2223 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 IGLV3-32A0A0A0MS00 114 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 A0A0G2JK05 382 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 LNP1A1A4G5 178 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 PRSS37A4D1T9 235 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 FAM172BPA6NC97 362 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 TMEM221A6NGB7 291 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 VSTM2BA6NLU5 285 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 PLA2G10O15496 165 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 SSX5O60225 188 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 ZNF254O75437 659 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 SCRG1O75711 98 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 ZFAND5O76080 213 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 GSTT2BP0CG30 244 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 NR2C1P13056 603 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 ALOX5APP20292 161 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 NAA10P41227 235 aaPredicted RBP6.86□□□□□ -1.31
SNX13-208ENST00000482558 EMP2P54851 167 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 CAV3P56539 151 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 RAP2BP61225 183 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 GLO1Q04760 184 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 TOMM34Q15785 309 aaPredicted RBP6.86□□□□□ -1.31
SNX13-208ENST00000482558 NDUFAF6Q330K2 333 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 ZFP69Q49AA0 526 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 VWA2Q5GFL6 755 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 PMS2CLQ68D20 193 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 ZNF57Q68EA5 555 aaPredicted RBP6.86□□□□□ -1.31
SNX13-208ENST00000482558 SLC18B1Q6NT16 456 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 DEGS2Q6QHC5 323 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 APOOLQ6UXV4 268 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 ANKRD37Q7Z713 158 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 MARCH3Q86UD3 253 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 VASH2Q86V25 355 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 TCTE3Q8IZS6 198 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 YIPF7Q8N8F6 280 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 ZNF321PQ8N8H1 164 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 GATSQ8NAP1 163 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 ADPRHL1Q8NDY3 354 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 SLC24A4Q8NFF2 622 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 OR6F1Q8NGZ6 308 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 ZNF671Q8TAW3 534 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 GPR148Q8TDV2 347 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 SAP25Q8TEE9 199 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 RNF138Q8WVD3 245 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.86□□□□□ -1.31
SNX13-208ENST00000482558 EDAQ92838 391 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 RASD2Q96D21 266 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 C14orf79Q96F83 325 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 S100A16Q96FQ6 103 aaKnown RBP6.86□□□□□ -1.31
SNX13-208ENST00000482558 TSPAN32Q96QS1 320 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 DCLRE1CQ96SD1 692 aaKnown RBP6.86□□□□□ -1.31
SNX13-208ENST00000482558 CTRCQ99895 268 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 SSX3Q99909 188 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 PTDSS2Q9BVG9 487 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 RANGRFQ9HD47 186 aaPredicted RBP6.86□□□□□ -1.31
SNX13-208ENST00000482558 ACOXLQ9NUZ1 547 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 PTTG3PQ9NZH4 202 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 FBXL4Q9UKA2 621 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 ZNF346Q9UL40 294 aaKnown RBP6.86□□□□□ -1.31
SNX13-208ENST00000482558 N6AMT1Q9Y5N5 214 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 NUBP2Q9Y5Y2 271 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 V9GY05 133 aa6.86□□□□□ -1.31
SNX13-208ENST00000482558 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.85□□□□□ -1.31
SNX13-208ENST00000482558 TRBV5-5A0A0J9YX44 114 aa6.85□□□□□ -1.31
SNX13-208ENST00000482558 IFITM5A6NNB3 132 aa6.85□□□□□ -1.31
SNX13-208ENST00000482558 A8MU76 341 aa6.85□□□□□ -1.31
SNX13-208ENST00000482558 IDSB3KWA1 339 aa6.85□□□□□ -1.31
SNX13-208ENST00000482558 PLPP3O14495 311 aa6.85□□□□□ -1.31
SNX13-208ENST00000482558 GPR171O14626 319 aa6.85□□□□□ -1.31
SNX13-208ENST00000482558 TP53I11O14683 189 aa6.85□□□□□ -1.31
SNX13-208ENST00000482558 SELENOFO60613 162 aa6.85□□□□□ -1.31
SNX13-208ENST00000482558 NCR1O76036 304 aa6.85□□□□□ -1.31
SNX13-208ENST00000482558 TOX4O94842 621 aa6.85□□□□□ -1.31
SNX13-208ENST00000482558 SCAF4O95104 1147 aaKnown RBP6.85□□□□□ -1.31
SNX13-208ENST00000482558 YES1P07947 543 aa6.85□□□□□ -1.31
SNX13-208ENST00000482558 TMEM225BP0DP42 221 aa6.85□□□□□ -1.31
SNX13-208ENST00000482558 PSKH1P11801 424 aa6.85□□□□□ -1.31
SNX13-208ENST00000482558 FGF5P12034 268 aa6.85□□□□□ -1.31
SNX13-208ENST00000482558 FOSL2P15408 326 aa6.85□□□□□ -1.31
SNX13-208ENST00000482558 ERP29P30040 261 aaKnown RBP6.85□□□□□ -1.31
SNX13-208ENST00000482558 SLC6A1P30531 599 aa6.85□□□□□ -1.31
SNX13-208ENST00000482558 CCKBRP32239 447 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms