RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 METTL17Q9H7H0 456 aaPredicted RBP16.86■□□□□ 0.29
MSH5-215ENST00000482280 TMEM106BQ9NUM4 274 aa16.86■□□□□ 0.29
MSH5-215ENST00000482280 IL20Q9NYY1 176 aa16.86■□□□□ 0.29
MSH5-215ENST00000482280 NPTNQ9Y639 398 aa16.86■□□□□ 0.29
MSH5-215ENST00000482280 TCRBV5S2A0A599 114 aa16.85■□□□□ 0.29
MSH5-215ENST00000482280 IFNL4K9M1U5 179 aa16.85■□□□□ 0.29
MSH5-215ENST00000482280 IGHV2-5P01817 119 aa16.85■□□□□ 0.29
MSH5-215ENST00000482280 LCATP04180 440 aa16.85■□□□□ 0.29
MSH5-215ENST00000482280 SBK2P0C263 348 aa16.85■□□□□ 0.29
MSH5-215ENST00000482280 RAP2AP10114 183 aa16.85■□□□□ 0.29
MSH5-215ENST00000482280 SLC6A9P48067 706 aa16.85■□□□□ 0.29
MSH5-215ENST00000482280 SRP9P49458 86 aaKnown RBP16.85■□□□□ 0.29
MSH5-215ENST00000482280 GK3PQ14409 553 aa16.85■□□□□ 0.29
MSH5-215ENST00000482280 TAF13Q15543 124 aa16.85■□□□□ 0.29
MSH5-215ENST00000482280 OR2T2Q6IF00 324 aa16.85■□□□□ 0.29
MSH5-215ENST00000482280 CFAP77Q6ZQR2 320 aa16.85■□□□□ 0.29
MSH5-215ENST00000482280 CYB561A3Q8NBI2 242 aa16.85■□□□□ 0.29
MSH5-215ENST00000482280 OR8G5Q8NG78 346 aa16.85■□□□□ 0.29
MSH5-215ENST00000482280 TEX47Q8TBZ9 253 aa16.85■□□□□ 0.29
MSH5-215ENST00000482280 OR2V2Q96R30 315 aa16.85■□□□□ 0.29
MSH5-215ENST00000482280 THTPAQ9BU02 230 aa16.85■□□□□ 0.29
MSH5-215ENST00000482280 C1orf21Q9H246 121 aa16.85■□□□□ 0.29
MSH5-215ENST00000482280 CYB5R1Q9UHQ9 305 aa16.85■□□□□ 0.29
MSH5-215ENST00000482280 MALRD1Q5VYJ5 2156 aa16.85■□□□□ 0.29
MSH5-215ENST00000482280 RIIAD1A6NNX1 92 aa16.84■□□□□ 0.29
MSH5-215ENST00000482280 BHLHE40O14503 412 aa16.84■□□□□ 0.29
MSH5-215ENST00000482280 PLPP2O43688 288 aa16.84■□□□□ 0.29
MSH5-215ENST00000482280 HOXB6P17509 224 aaKnown RBP16.84■□□□□ 0.29
MSH5-215ENST00000482280 FMO3P31513 532 aa16.84■□□□□ 0.29
MSH5-215ENST00000482280 PYCR1P32322 319 aa16.84■□□□□ 0.29
MSH5-215ENST00000482280 RAD23AP54725 363 aa16.84■□□□□ 0.29
MSH5-215ENST00000482280 TRAP1Q12931 704 aaKnown RBP16.84■□□□□ 0.29
MSH5-215ENST00000482280 PPP1R8Q12972 351 aaKnown RBP16.84■□□□□ 0.29
MSH5-215ENST00000482280 DCAF12L2Q5VW00 463 aa16.84■□□□□ 0.29
MSH5-215ENST00000482280 PHC2Q8IXK0 858 aa16.84■□□□□ 0.29
MSH5-215ENST00000482280 BHLHE23Q8NDY6 225 aa16.84■□□□□ 0.29
MSH5-215ENST00000482280 ITLN1Q8WWA0 313 aa16.84■□□□□ 0.29
MSH5-215ENST00000482280 LRRC30A6NM36 301 aa16.83■□□□□ 0.28
MSH5-215ENST00000482280 H3BN98 237 aa16.83■□□□□ 0.28
MSH5-215ENST00000482280 J3QLI3 93 aa16.83■□□□□ 0.28
MSH5-215ENST00000482280 GYG2O15488 501 aa16.83■□□□□ 0.28
MSH5-215ENST00000482280 SOX14O95416 240 aa16.83■□□□□ 0.28
MSH5-215ENST00000482280 CST1P01037 141 aa16.83■□□□□ 0.28
MSH5-215ENST00000482280 ZNF3P17036 446 aa16.83■□□□□ 0.28
MSH5-215ENST00000482280 GATA3P23771 443 aa16.83■□□□□ 0.28
MSH5-215ENST00000482280 BLVRAP53004 296 aa16.83■□□□□ 0.28
MSH5-215ENST00000482280 DNAL1Q4LDG9 190 aa16.83■□□□□ 0.28
MSH5-215ENST00000482280 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.83■□□□□ 0.283e-8■■■■□ 24.7
MSH5-215ENST00000482280 MRPL21Q7Z2W9 205 aaKnown RBP16.83■□□□□ 0.28
MSH5-215ENST00000482280 LNX2Q8N448 690 aa16.83■□□□□ 0.28
MSH5-215ENST00000482280 OR10G2Q8NGC3 310 aa16.83■□□□□ 0.28
MSH5-215ENST00000482280 OR6K6Q8NGW6 343 aa16.83■□□□□ 0.28
MSH5-215ENST00000482280 SPRYD4Q8WW59 207 aaPredicted RBP16.83■□□□□ 0.28
MSH5-215ENST00000482280 YY1AP1Q9H869 796 aa16.83■□□□□ 0.28
MSH5-215ENST00000482280 TMEM100Q9NV29 134 aa16.83■□□□□ 0.28
MSH5-215ENST00000482280 NOP16Q9Y3C1 178 aaKnown RBP16.83■□□□□ 0.28
MSH5-215ENST00000482280 M0R135 149 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 FOXH1O75593 365 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 SPARCP09486 303 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 ACSM4P0C7M7 580 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 GGT2P36268 569 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 BTG1P62324 171 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 MS4A2Q01362 244 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 ZNF770Q6IQ21 691 aaPredicted RBP16.82■□□□□ 0.28
MSH5-215ENST00000482280 Q6ZR03 302 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 PGAP1Q75T13 922 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 MUC20Q8N307 709 aaPredicted RBP16.82■□□□□ 0.28
MSH5-215ENST00000482280 ZNF283Q8N7M2 679 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 SLC37A3Q8NCC5 494 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 OR10AD1Q8NGE0 317 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 OR9Q1Q8NGQ5 310 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 OTULINQ96BN8 352 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 ZNF799Q96GE5 643 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 COPS4Q9BT78 406 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 CHID1Q9BWS9 393 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 C1QTNF5Q9BXJ0 243 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 DGCR6LQ9BY27 220 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 PLA2G12AQ9BZM1 189 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 WDR76Q9H967 626 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 ZNF556Q9HAH1 456 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 TAS2R1Q9NYW7 299 aa16.82■□□□□ 0.28
MSH5-215ENST00000482280 TVP23AA6NH52 213 aa16.81■□□□□ 0.28
MSH5-215ENST00000482280 IQCF6A8MYZ5 107 aa16.81■□□□□ 0.28
MSH5-215ENST00000482280 DEAF1O75398 565 aaPredicted RBP16.81■□□□□ 0.28
MSH5-215ENST00000482280 E2F6O75461 281 aa16.81■□□□□ 0.28
MSH5-215ENST00000482280 IRF2P14316 349 aa16.81■□□□□ 0.28
MSH5-215ENST00000482280 PAICSP22234 425 aaKnown RBP16.81■□□□□ 0.28
MSH5-215ENST00000482280 ERFP50548 548 aa16.81■□□□□ 0.28
MSH5-215ENST00000482280 LCN2P80188 198 aa16.81■□□□□ 0.28
MSH5-215ENST00000482280 TRPM8Q7Z2W7 1104 aa16.81■□□□□ 0.28
MSH5-215ENST00000482280 C1orf87Q8N0U7 546 aa16.81■□□□□ 0.28
MSH5-215ENST00000482280 OR51L1Q8NGJ5 315 aa16.81■□□□□ 0.28
MSH5-215ENST00000482280 BCAS4Q8TDM0 211 aa16.81■□□□□ 0.28
MSH5-215ENST00000482280 ZNF418Q8TF45 676 aaPredicted RBP16.81■□□□□ 0.28
MSH5-215ENST00000482280 GIPC3Q8TF64 312 aa16.81■□□□□ 0.28
MSH5-215ENST00000482280 CLPTM1LQ96KA5 538 aa16.81■□□□□ 0.28
MSH5-215ENST00000482280 ARMC1Q9NVT9 282 aa16.81■□□□□ 0.28
MSH5-215ENST00000482280 MRPL22Q9NWU5 206 aaKnown RBP16.81■□□□□ 0.28
MSH5-215ENST00000482280 DHRS12A0PJE2 317 aa16.8■□□□□ 0.28
MSH5-215ENST00000482280 AQP12BA6NM10 295 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms