RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 CST2P09228 141 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 TMIGD3P0DMS9 266 aaPredicted RBP17.2■□□□□ 0.34
CCM2-214ENST00000481194 GABRA4P48169 554 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 FMODQ06828 376 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 SPERTQ8NA61 448 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 OR4M1Q8NGD0 313 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 DOK1Q99704 481 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 MRPS18AQ9NVS2 196 aaKnown RBP17.2■□□□□ 0.34
CCM2-214ENST00000481194 DUSP13Q9UII6 198 aa17.2■□□□□ 0.34
CCM2-214ENST00000481194 NXPH2O95156 264 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 IGHA1P01876 353 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 C1QCP02747 245 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 ERP29P30040 261 aaKnown RBP17.19■□□□□ 0.34
CCM2-214ENST00000481194 AP2S1P53680 142 aaPredicted RBP17.19■□□□□ 0.34
CCM2-214ENST00000481194 KRTCAP3Q53RY4 240 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 DYNC2LI1Q8TCX1 351 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 M0R1B8 84 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 BLVRBP30043 206 aaPredicted RBP17.19■□□□□ 0.34
CCM2-214ENST00000481194 MTFR2Q6P444 385 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 ZDHHC23Q8IYP9 409 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 OR51D1Q8NGF3 324 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 GPR173Q9NS66 373 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 PCDHB10Q9UN67 800 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 LOC101059948A0A1B0GTJ6 334 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 PLXDC2Q6UX71 529 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 STAC2Q6ZMT1 411 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 CHST2Q9Y4C5 530 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 LOC102723996A0A087X1L8 192 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 HYAL3O43820 417 aaPredicted RBP17.19■□□□□ 0.34
CCM2-214ENST00000481194 SCGB1D2O95969 90 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 SOX18P35713 384 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 CLDN12P56749 244 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 CYCSP99999 105 aaKnown RBP17.19■□□□□ 0.34
CCM2-214ENST00000481194 GSG1LQ6UXU4 331 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 CDC20BQ86Y33 519 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 GMPPAQ96IJ6 420 aaPredicted RBP17.19■□□□□ 0.34
CCM2-214ENST00000481194 PFDN2Q9UHV9 154 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 MGAT4AQ9UM21 535 aa17.19■□□□□ 0.34
CCM2-214ENST00000481194 A0A1B0GVC2 190 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 LIMS3P0CW19 117 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 LIMS4P0CW20 117 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 CTLA4P16410 223 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 RAB1AP62820 205 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 CFHR1Q03591 330 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 TBRG1Q3YBR2 411 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 EXOSC6Q5RKV6 272 aaKnown RBP17.18■□□□□ 0.34
CCM2-214ENST00000481194 USB1Q9BQ65 265 aaKnown RBP17.18■□□□□ 0.34
CCM2-214ENST00000481194 KIAA1671Q9BY89 1806 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 A0A0A6YYH2 397 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 A6NJ64 397 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 OR2AT4A6NND4 320 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 IL7P13232 177 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 CLDN6P56747 220 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 GNMTQ14749 295 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 FAM210AQ96ND0 272 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 SPIN2AQ99865 258 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 SPIN2BQ9BPZ2 258 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 CELA2AP08217 269 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 AGTR1P30556 359 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 MGAT4CQ9UBM8 478 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 SLC22A13Q9Y226 551 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 TK1P04183 234 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 GGTLC2Q14390 218 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 OR6F1Q8NGZ6 308 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 C4orf45Q96LM5 186 aa17.18■□□□□ 0.34
CCM2-214ENST00000481194 IFITM5A6NNB3 132 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 AKR1C4P17516 323 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 C1QL3Q5VWW1 255 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 XAF1Q6GPH4 301 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 SPSB1Q96BD6 273 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 RHNO1Q9BSD3 238 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 GBF1Q92538 1859 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 FXYD6-FXYD2A0A087WZ82 144 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 ATF1P18846 271 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 APCDD1LQ8NCL9 501 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 ZNF431Q8TF32 576 aaPredicted RBP17.17■□□□□ 0.34
CCM2-214ENST00000481194 BEX2Q9BXY8 128 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 FXYD6Q9H0Q3 95 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 PLK3Q9H4B4 646 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 BEX1Q9HBH7 125 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 PTTG3PQ9NZH4 202 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 ATP23Q9Y6H3 246 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 FUT6P51993 359 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 PIAS4Q8N2W9 510 aaPredicted RBP17.17■□□□□ 0.34
CCM2-214ENST00000481194 FAM71CQ8NEG0 241 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 A0A1W2PNV4 684 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 SCAND1P57086 179 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 NKX2-8O15522 239 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 ALOX5APP20292 161 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 S100A1P23297 94 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 RPS27P42677 84 aaKnown RBP17.17■□□□□ 0.34
CCM2-214ENST00000481194 LPCAT3Q6P1A2 487 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 OR4K15Q8NH41 348 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 PELI1Q96FA3 418 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 KCNE5Q9UJ90 142 aa17.17■□□□□ 0.34
CCM2-214ENST00000481194 RNF212BA8MTL3 300 aa17.16■□□□□ 0.34
CCM2-214ENST00000481194 GDNFP39905 211 aa17.16■□□□□ 0.34
CCM2-214ENST00000481194 TMPRSS7Q7RTY8 843 aa17.16■□□□□ 0.34
CCM2-214ENST00000481194 GABRA2P47869 451 aa17.16■□□□□ 0.34
CCM2-214ENST00000481194 PEAR1Q5VY43 1037 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms