RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	KCNJ2	P63252	427 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	ACTG2	P63267	376 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	CDK5	Q00535	292 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	MXD1	Q05195	221 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	VPS26B	Q4G0F5	336 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	HSP90AB3P	Q58FF7	597 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	PRAMEF20	Q5VT98	475 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	RNASEK	Q6P5S7	137 aa	Known RBP	1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	C16orf47	Q6ZP98	133 aa	Predicted RBP	1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	EIF3M	Q7L2H7	374 aa	Known RBP	1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	OTUD6A	Q7L8S5	288 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	EGFL6	Q8IUX8	553 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	ZNF101	Q8IZC7	436 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	SLC35G3	Q8N808	338 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	ZFP41	Q8N8Y5	198 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	FAM184A	Q8NB25	1140 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	FBXL13	Q8NEE6	735 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	FAM81A	Q8TBF8	368 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	GPR151	Q8TDV0	419 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	NT5C3B	Q969T7	300 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	GSDMA	Q96QA5	445 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	HSD17B10	Q99714	261 aa	Known RBP	1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	CENPK	Q9BS16	269 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	NUP58	Q9BVL2	599 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	CLSTN2	Q9H4D0	955 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	EXO5	Q9H790	373 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	METTL7A	Q9H8H3	244 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	NEK6	Q9HC98	313 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	CHRAC1	Q9NRG0	131 aa		1.04	□□□□□ -2.24
CCNL1-223	ENST00000481173	TRAV19	A0A0A6YYK7	116 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	ZNF816-ZNF321P	A0A0X1KG74	233 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	OR6C74	A6NCV1	312 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	SMCO2	A6NFE2	343 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	CEACAM18	A8MTB9	384 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173		H0YIV9	168 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173		H7C0C1	242 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173		L7N2F9	121 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	WRB	O00258	174 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	MANBA	O00462	879 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	RNF13	O43567	381 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	CHMP2A	O43633	222 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	KLHL41	O60662	606 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	CDH16	O75309	829 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	CYB5R3	P00387	301 aa	Predicted RBP	1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	FTH1	P02794	183 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	HMOX2	P30519	316 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	OTX1	P32242	354 aa	Predicted RBP	1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	FOXN2	P32314	431 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	PEX19	P40855	299 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	CRYBB2	P43320	205 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	MAGEA1	P43355	309 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	ATP5O	P48047	213 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	TPMT	P51580	245 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	RND2	P52198	227 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	CDKN2D	P55273	166 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	C21orf59	P57076	290 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	PPP1CB	P62140	327 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	BEX3	Q00994	111 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	MERTK	Q12866	999 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	PPIL2	Q13356	520 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	IL18	Q14116	193 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	ZNF77	Q15935	545 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	HSP90AA4P	Q58FG1	418 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	XKR7	Q5GH72	579 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	AVPI1	Q5T686	147 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	TTC23L	Q6PF05	361 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	BZW1	Q7L1Q6	419 aa	Known RBP	1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	SSX9	Q7RTT3	188 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	LUZP2	Q86TE4	346 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	COMMD1	Q8N668	190 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	OR8J1	Q8NGP2	316 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	OR1L4	Q8NGR5	311 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	TSEN15	Q8WW01	171 aa	Known RBP	1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	SLC38A4	Q969I6	547 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	GGTLC1	Q9BX51	225 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	GON7	Q9BXV9	100 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	ANKRD19P	Q9H560	264 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	EDA2R	Q9HAV5	297 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	MRPL22	Q9NWU5	206 aa	Known RBP	1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	SAR1B	Q9Y6B6	198 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	HELZ2	Q9BYK8	2649 aa	Known RBP	1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	USP47	Q96K76	1375 aa		1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	COL5A3	P25940	1745 aa	Predicted RBP	1.03	□□□□□ -2.24
CCNL1-223	ENST00000481173	LRRIQ3	A6PVS8	624 aa	Predicted RBP	1.02	□□□□□ -2.25
CCNL1-223	ENST00000481173	CASC3	O15234	703 aa	Known RBP	1.02	□□□□□ -2.25
CCNL1-223	ENST00000481173	CDC40	O60508	579 aa	Known RBP eCLIP	1.02	□□□□□ -2.25
CCNL1-223	ENST00000481173	RALB	P11234	206 aa		1.02	□□□□□ -2.25
CCNL1-223	ENST00000481173	SFTPC	P11686	197 aa		1.02	□□□□□ -2.25
CCNL1-223	ENST00000481173	ANXA8	P13928	327 aa		1.02	□□□□□ -2.25
CCNL1-223	ENST00000481173	HRES1	P13985	223 aa		1.02	□□□□□ -2.25
CCNL1-223	ENST00000481173	ATP1B2	P14415	290 aa	Predicted RBP	1.02	□□□□□ -2.25
CCNL1-223	ENST00000481173	ETS2	P15036	469 aa		1.02	□□□□□ -2.25
CCNL1-223	ENST00000481173	WARS	P23381	471 aa	Known RBP	1.02	□□□□□ -2.25
CCNL1-223	ENST00000481173	CCT6A	P40227	531 aa	Known RBP	1.02	□□□□□ -2.25
CCNL1-223	ENST00000481173	GPX6	P59796	221 aa		1.02	□□□□□ -2.25
CCNL1-223	ENST00000481173	RAB10	P61026	200 aa		1.02	□□□□□ -2.25
CCNL1-223	ENST00000481173	CNTNAP1	P78357	1384 aa		1.02	□□□□□ -2.25
CCNL1-223	ENST00000481173	CCNA1	P78396	465 aa		1.02	□□□□□ -2.25
CCNL1-223	ENST00000481173	ADARB1	P78563	741 aa	Known RBP	1.02	□□□□□ -2.25

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms