RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 SMN1Q16637 294 aaKnown RBP7.8□□□□□ -1.16
VCP-206ENST00000480327 TEX30Q5JUR7 227 aa7.8□□□□□ -1.16
VCP-206ENST00000480327 ELFN2Q5R3F8 820 aa7.8□□□□□ -1.16
VCP-206ENST00000480327 HIST2H3PS2Q5TEC6 136 aa7.8□□□□□ -1.16
VCP-206ENST00000480327 ZNF691Q5VV52 312 aa7.8□□□□□ -1.16
VCP-206ENST00000480327 HIST2H3AQ71DI3 136 aa7.8□□□□□ -1.16
VCP-206ENST00000480327 SLC16A9Q7RTY1 509 aa7.8□□□□□ -1.16
VCP-206ENST00000480327 OR1J2Q8NGS2 313 aa7.8□□□□□ -1.16
VCP-206ENST00000480327 RHOXF1Q8NHV9 184 aa7.8□□□□□ -1.16
VCP-206ENST00000480327 CNIH3Q8TBE1 160 aa7.8□□□□□ -1.16
VCP-206ENST00000480327 APH1BQ8WW43 257 aa7.8□□□□□ -1.16
VCP-206ENST00000480327 FBXW5Q969U6 566 aa7.8□□□□□ -1.16
VCP-206ENST00000480327 SLAMF6Q96DU3 332 aa7.8□□□□□ -1.16
VCP-206ENST00000480327 AMELYQ99218 206 aa7.8□□□□□ -1.16
VCP-206ENST00000480327 CNN2Q99439 309 aaKnown RBP7.8□□□□□ -1.16
VCP-206ENST00000480327 TBX5Q99593 518 aa7.8□□□□□ -1.16
VCP-206ENST00000480327 WACQ9BTA9 647 aa7.8□□□□□ -1.16
VCP-206ENST00000480327 ABHD6Q9BV23 337 aa7.8□□□□□ -1.16
VCP-206ENST00000480327 C1orf198Q9H425 327 aa7.8□□□□□ -1.16
VCP-206ENST00000480327 MARCH7Q9H992 704 aa7.8□□□□□ -1.16
VCP-206ENST00000480327 AMBNQ9NP70 447 aa7.8□□□□□ -1.16
VCP-206ENST00000480327 PNRC2Q9NPJ4 139 aaKnown RBP7.8□□□□□ -1.16
VCP-206ENST00000480327 WARS2Q9UGM6 360 aaKnown RBP7.8□□□□□ -1.16
VCP-206ENST00000480327 LAMP5Q9UJQ1 280 aa7.8□□□□□ -1.16
VCP-206ENST00000480327 GRIP1Q9Y3R0 1128 aa7.8□□□□□ -1.16
VCP-206ENST00000480327 N6AMT1Q9Y5N5 214 aa7.8□□□□□ -1.16
VCP-206ENST00000480327 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.79□□□□□ -1.161e-7■■■□□ 18.2
VCP-206ENST00000480327 IGHV4-30-2A0A087WSY4 118 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 OR6C6A6NF89 314 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 F5H5K5 113 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 H0YAE9 185 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 MAGEB4O15481 346 aaPredicted RBP7.79□□□□□ -1.16
VCP-206ENST00000480327 MPZL2O60487 215 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 LCKP06239 509 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 LYNP07948 512 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 NR4A1P22736 598 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 THBS4P35443 961 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 VHLP40337 213 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 WNT5AP41221 380 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 FABP6P51161 128 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 PRKXP51817 358 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 MAD2L1BPQ15013 274 aaPredicted RBP7.79□□□□□ -1.16
VCP-206ENST00000480327 PCK2Q16822 640 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 SPATA46Q5T0L3 261 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 MEDAGQ5VYS4 303 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 C11orf71Q6IPW1 123 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 DTX2Q86UW9 622 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 NAA40Q86UY6 237 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 SLC35F2Q8IXU6 374 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 ZNF101Q8IZC7 436 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 C8orf59Q8N0T1 100 aaPredicted RBP7.79□□□□□ -1.16
VCP-206ENST00000480327 RFLNBQ8N5W9 214 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 SETD9Q8NE22 299 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 IL17RDQ8NFM7 739 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 OR4F15Q8NGB8 312 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 OTOSQ8NHW6 89 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 ST7LQ8TDW4 575 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 TFAP2CQ92754 450 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 RFKQ969G6 155 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 RNFT2Q96EX2 444 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 C4orf45Q96LM5 186 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 COQ7Q99807 217 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 ATF6BQ99941 703 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 COPS4Q9BT78 406 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 HDHD2Q9H0R4 259 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 ADGRL4Q9HBW9 690 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 YAE1D1Q9NRH1 226 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 EIF3KQ9UBQ5 218 aaKnown RBP7.79□□□□□ -1.16
VCP-206ENST00000480327 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.79□□□□□ -1.16
VCP-206ENST00000480327 FZR1Q9UM11 496 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 COPS3Q9UNS2 423 aa7.79□□□□□ -1.16
VCP-206ENST00000480327 PRR32B1ATL7 298 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 H0YJX3 145 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 WBP4O75554 376 aaKnown RBP7.78□□□□□ -1.16
VCP-206ENST00000480327 ABHD16AO95870 558 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 NGFP01138 241 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 H2BFMP0C1H6 154 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 SBK2P0C263 348 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 COX5BP10606 129 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 ALOX5APP20292 161 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 MTNR1AP48039 350 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 SLC6A9P48067 706 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 UCP2P55851 309 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 ISL1P61371 349 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 ZNF91Q05481 1191 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 GGTLC2Q14390 218 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 SNCBQ16143 134 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 MSMPQ1L6U9 139 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 RSPO1Q2MKA7 263 aaPredicted RBP7.78□□□□□ -1.16
VCP-206ENST00000480327 SLC25A30Q5SVS4 291 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 LRRN1Q6UXK5 716 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 RFPL4BQ6ZWI9 263 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 ZNF283Q8N7M2 679 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 OR10H4Q8NGA5 316 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 OR1J1Q8NGS3 322 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 ABHD4Q8TB40 342 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 TRMT61AQ96FX7 289 aaKnown RBP7.78□□□□□ -1.16
VCP-206ENST00000480327 Q96MT0 163 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 SYT3Q9BQG1 590 aa7.78□□□□□ -1.16
VCP-206ENST00000480327 YIPF3Q9GZM5 350 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms