RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 TCTAP57738 103 aa8.2□□□□□ -1.1
TTC3-216ENST00000479930 CCL7P80098 99 aa8.2□□□□□ -1.1
TTC3-216ENST00000479930 KHDC1Q4VXA5 237 aaKnown RBP8.2□□□□□ -1.1
TTC3-216ENST00000479930 TAAR6Q96RI8 345 aa8.2□□□□□ -1.1
TTC3-216ENST00000479930 CHRDL1Q9BU40 450 aa8.2□□□□□ -1.1
TTC3-216ENST00000479930 TMEM140Q9NV12 185 aa8.2□□□□□ -1.1
TTC3-216ENST00000479930 C1RLQ9NZP8 487 aa8.2□□□□□ -1.1
TTC3-216ENST00000479930 TUBGCP6Q96RT7 1819 aa8.2□□□□□ -1.1
TTC3-216ENST00000479930 hCG_1818297A0A087WSY0 165 aa8.2□□□□□ -1.1
TTC3-216ENST00000479930 ANKUB1A6NFN9 424 aa8.2□□□□□ -1.1
TTC3-216ENST00000479930 NDUFB2O95178 105 aa8.2□□□□□ -1.1
TTC3-216ENST00000479930 MFSD9Q8NBP5 474 aa8.2□□□□□ -1.1
TTC3-216ENST00000479930 OR1B1Q8NGR6 318 aa8.2□□□□□ -1.1
TTC3-216ENST00000479930 UBQLN3Q9H347 655 aa8.2□□□□□ -1.1
TTC3-216ENST00000479930 SEBOXQ9HB31 216 aaPredicted RBP8.2□□□□□ -1.1
TTC3-216ENST00000479930 KDM6BO15054 1643 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 NPFFO15130 113 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 CCR7P32248 378 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 STARD6P59095 220 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 MRAPQ8TCY5 172 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 SPSB2Q99619 263 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 KCNK15Q9H427 330 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 SLCO1C1Q9NYB5 712 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 MBD1Q9UIS9 605 aaPredicted RBP8.19□□□□□ -1.1
TTC3-216ENST00000479930 CACNA1SQ13698 1873 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 GSTZ1O43708 216 aaPredicted RBP8.19□□□□□ -1.1
TTC3-216ENST00000479930 PTBP3O95758 552 aaKnown RBP8.19□□□□□ -1.1
TTC3-216ENST00000479930 APOC3P02656 99 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 GPR18Q14330 331 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 XKR7Q5GH72 579 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 SPANXN5Q5MJ07 72 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 PRSS35Q8N3Z0 413 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 PTX4Q96A99 478 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 FCRL5Q96RD9 977 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 DOPEY2Q9Y3R5 2298 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 LOC102723996A0A087X1L8 192 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 A0A0B4J2A0 478 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 DEFB108AA8MXU0 73 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 NDUFAF5Q5TEU4 345 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 C5orf17Q8NAS9 161 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 KTI12Q96EK9 354 aaPredicted RBP8.19□□□□□ -1.1
TTC3-216ENST00000479930 REPIN1Q9BWE0 567 aaKnown RBP8.19□□□□□ -1.1
TTC3-216ENST00000479930 SHPKQ9UHJ6 478 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 SLC17A4Q9Y2C5 497 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 GPR52Q9Y2T5 361 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 UGT2A1Q9Y4X1 527 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 NOTCH3Q9UM47 2321 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 ARHGEF28Q8N1W1 1705 aaKnown RBP8.19□□□□□ -1.1
TTC3-216ENST00000479930 SIX3O95343 332 aaPredicted RBP8.19□□□□□ -1.1
TTC3-216ENST00000479930 RETP07949 1114 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 TUBA1BP68363 451 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 TUBA4AP68366 448 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 HBA1P69905 142 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 CYCSP99999 105 aaKnown RBP8.19□□□□□ -1.1
TTC3-216ENST00000479930 MFGE8Q08431 387 aaPredicted RBP8.19□□□□□ -1.1
TTC3-216ENST00000479930 BEX5Q5H9J7 111 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 TUBA1AQ71U36 451 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 SLC35D2Q76EJ3 337 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 MDP1Q86V88 176 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 ACTRT1Q8TDG2 376 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 GPX7Q96SL4 187 aaPredicted RBP8.19□□□□□ -1.1
TTC3-216ENST00000479930 ERRFI1Q9UJM3 462 aaPredicted RBP8.19□□□□□ -1.1
TTC3-216ENST00000479930 LRRC10BA6NIK2 292 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 PPP5D1E7EU14 171 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 C3orf80F5H4A9 247 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 IAPPP10997 89 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 CBR1P16152 277 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 AVPR2P30518 371 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 RPL35P42766 123 aaKnown RBP8.19□□□□□ -1.1
TTC3-216ENST00000479930 INPP5JQ15735 1006 aaPredicted RBP8.19□□□□□ -1.1
TTC3-216ENST00000479930 FNDC7Q5VTL7 733 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 LRRC55Q6ZSA7 311 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 MARCH3Q86UD3 253 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 DOLPP1Q86YN1 238 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 FAM71CQ8NEG0 241 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 OR56B4Q8NH76 319 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 TMEM56Q96MV1 263 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 BABAM2Q9NXR7 383 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 METRNQ9UJH8 293 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 CLTCQ00610 1675 aaKnown RBP8.19□□□□□ -1.1
TTC3-216ENST00000479930 TEX50A0A1B0GTY4 177 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 H7C1C5 153 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 CD27P26842 260 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 LCN6P62502 163 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 SRSF4Q08170 494 aaKnown RBP8.19□□□□□ -1.1
TTC3-216ENST00000479930 KIR2DS3Q14952 304 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 PPRC1Q5VV67 1664 aaKnown RBP8.19□□□□□ -1.1
TTC3-216ENST00000479930 SDR39U1Q9NRG7 319 aaPredicted RBP8.19□□□□□ -1.1
TTC3-216ENST00000479930 UNGP13051 313 aaPredicted RBP8.19□□□□□ -1.1
TTC3-216ENST00000479930 GK2Q14410 553 aaPredicted RBP8.19□□□□□ -1.1
TTC3-216ENST00000479930 SLC5A12Q1EHB4 618 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 RPS26P11Q5JNZ5 115 aaPredicted RBP8.19□□□□□ -1.1
TTC3-216ENST00000479930 RDH5Q92781 318 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 GALPQ9UBC7 116 aa8.19□□□□□ -1.1
TTC3-216ENST00000479930 NME2P1O60361 137 aa8.18□□□□□ -1.1
TTC3-216ENST00000479930 SLC10A3P09131 477 aa8.18□□□□□ -1.1
TTC3-216ENST00000479930 ZNF137PP52743 207 aa8.18□□□□□ -1.1
TTC3-216ENST00000479930 GLCCI1Q86VQ1 547 aa8.18□□□□□ -1.1
TTC3-216ENST00000479930 ZNF683Q8IZ20 524 aa8.18□□□□□ -1.1
TTC3-216ENST00000479930 SCRN2Q96FV2 425 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms