RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 PXDC1Q5TGL8 231 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 C1orf94Q6P1W5 598 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 NIPAL3Q6P499 406 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 SMARCD3Q6STE5 483 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 PLXDC2Q6UX71 529 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 TFAP2EQ6VUC0 442 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 SEM1Q6ZVN7 128 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 AAED1Q7RTV5 226 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 TSEN54Q7Z6J9 526 aaKnown RBP5.45□□□□□ -1.54
SF3B1-209ENST00000479532 PXKQ7Z7A4 578 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 P2RY8Q86VZ1 359 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 TUSC5Q8IXB3 177 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 STX19Q8N4C7 294 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 GDPD1Q8N9F7 314 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 POMGNT2Q8NAT1 580 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 AQP11Q8NBQ7 271 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 KBTBD8Q8NFY9 601 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 OR9Q2Q8NGE9 314 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 OR4C15Q8NGM1 316 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 OR13C2Q8NGS9 318 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 OR51A7Q8NH64 312 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 SNAPC3Q92966 411 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 TMEM45BQ96B21 275 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 APH1AQ96BI3 265 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 ZC3HAV1LQ96H79 300 aaKnown RBP5.45□□□□□ -1.54
SF3B1-209ENST00000479532 ADAD1Q96M93 576 aaKnown RBP5.45□□□□□ -1.54
SF3B1-209ENST00000479532 FUZQ9BT04 418 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 C1orf43Q9BWL3 253 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 DGCR6LQ9BY27 220 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 C11orf54Q9H0W9 315 aaPredicted RBP5.45□□□□□ -1.54
SF3B1-209ENST00000479532 KCNJ16Q9NPI9 418 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 PCDHB16Q9NRJ7 776 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 C20orf141Q9NUB4 165 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 USE1Q9NZ43 259 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 KIF25Q9UIL4 384 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 RCE1Q9Y256 329 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 FLVCR1Q9Y5Y0 555 aa5.45□□□□□ -1.54
SF3B1-209ENST00000479532 SPENQ96T58 3664 aaKnown RBP5.44□□□□□ -1.54
SF3B1-209ENST00000479532 MED12LQ86YW9 2145 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 TRAV6A0A075B6T7 132 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 TRAV27A0A087WT01 109 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 UBE2QL1A1L167 161 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 A6NIZ1 184 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 NPIPB13A6NJU9 1138 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF716A6NP11 495 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 KDM4EB2RXH2 506 aaPredicted RBP5.44□□□□□ -1.54
SF3B1-209ENST00000479532 NPIPB4C9JG80 1138 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 MS4A18H0YCH9 400 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 H3BN98 237 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 WRBO00258 174 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 SOCS2O14508 198 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 XKRYO14609 159 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 TNFSF13O75888 250 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 SLC22A5O76082 557 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 TOXO94900 526 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 CNOT4O95628 575 aaKnown RBP5.44□□□□□ -1.54
SF3B1-209ENST00000479532 IGHG1P01857 330 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 SMIM6P0DI80 62 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 RRASP10301 218 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 POU2F1P14859 743 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 PCMT1P22061 227 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 SLC6A6P31641 620 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 UQCRC1P31930 480 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 AQP2P41181 271 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 SLC15A1P46059 708 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 RAB13P51153 203 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 P2RY4P51582 365 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 ALDH3A2P51648 485 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 ARHGDIBP52566 201 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 CLRN1P58418 232 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 RAP1BP61224 184 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 RPS4XP62701 263 aaKnown RBP5.44□□□□□ -1.54
SF3B1-209ENST00000479532 RAP1AP62834 184 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 LGALS3BPQ08380 585 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 FOXF2Q12947 444 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 PPP1R8Q12972 351 aaKnown RBP5.44□□□□□ -1.54
SF3B1-209ENST00000479532 ASAH1Q13510 395 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 GRK1Q15835 563 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 NEDD8Q15843 81 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 MS4A18Q3C1V0 323 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 KHDC1LQ5JSQ8 128 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 KDM4DQ6B0I6 523 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 HMBOX1Q6NT76 420 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 PGBD2Q6P3X8 592 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 VWA1Q6PCB0 445 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 TMEM65Q6PI78 240 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 DPY19L2P2Q6ZN68 376 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 SLC35D2Q76EJ3 337 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 GDPD3Q7L5L3 318 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 ZER1Q7Z7L7 766 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 FAM90A1Q86YD7 464 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 EPHX4Q8IUS5 362 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 CCDC71Q8IV32 467 aaPredicted RBP5.44□□□□□ -1.54
SF3B1-209ENST00000479532 C8orf59Q8N0T1 100 aaPredicted RBP5.44□□□□□ -1.54
SF3B1-209ENST00000479532 KDM8Q8N371 416 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 GPR137CQ8N3F9 429 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 CBR4Q8N4T8 237 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 LRRC17Q8N6Y2 441 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 CLDN22Q8N7P3 220 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 NAXEQ8NCW5 288 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms