RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 ICA1LQ8NDH6 482 aa6.18□□□□□ -1.42
SSR1-206ENST00000479365 SYNPRQ8TBG9 265 aa6.18□□□□□ -1.42
SSR1-206ENST00000479365 ACOT11Q8WXI4 607 aaPredicted RBP6.18□□□□□ -1.42
SSR1-206ENST00000479365 RNF125Q96EQ8 232 aa6.18□□□□□ -1.42
SSR1-206ENST00000479365 ALG12Q9BV10 488 aa6.18□□□□□ -1.42
SSR1-206ENST00000479365 KRTAP9-2Q9BYQ4 174 aa6.18□□□□□ -1.42
SSR1-206ENST00000479365 OR2H1Q9GZK4 316 aa6.18□□□□□ -1.42
SSR1-206ENST00000479365 C1orf198Q9H425 327 aa6.18□□□□□ -1.42
SSR1-206ENST00000479365 HINT3Q9NQE9 182 aaKnown RBP6.18□□□□□ -1.42
SSR1-206ENST00000479365 TREM2Q9NZC2 230 aa6.18□□□□□ -1.42
SSR1-206ENST00000479365 ADAM18Q9Y3Q7 739 aa6.18□□□□□ -1.42
SSR1-206ENST00000479365 CACNG2Q9Y698 323 aa6.18□□□□□ -1.42
SSR1-206ENST00000479365 IQCMA0A1B0GVH7 501 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 C5orf49A4QMS7 147 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 HTR3EA5X5Y0 456 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 ZSCAN5BA6NJL1 495 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 EFCAB9A8MZ26 197 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 IMPA2O14732 288 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 PPIHO43447 177 aaKnown RBP6.17□□□□□ -1.42
SSR1-206ENST00000479365 ENTPD5O75356 428 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 IGHV3-13P01766 116 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 CST2P09228 141 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 SAGP10523 405 aaPredicted RBP6.17□□□□□ -1.42
SSR1-206ENST00000479365 STOMP27105 288 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 APLNRP35414 380 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 NUDT2P50583 147 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 MMP15P51511 669 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 DVL1P1P54792 670 aaPredicted RBP6.17□□□□□ -1.42
SSR1-206ENST00000479365 FXYD6P3P58550 94 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 MRPS11P82912 194 aaKnown RBP6.17□□□□□ -1.42
SSR1-206ENST00000479365 HSF2Q03933 536 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 PLP2Q04941 152 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 TRAM2Q15035 370 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 TAF11Q15544 211 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 SPRNQ5BIV9 151 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 MESTQ5EB52 335 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 THEM4Q5T1C6 240 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 AVPI1Q5T686 147 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 FAM27BQ5VT28 67 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 ZNF774Q6NX45 483 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 HACD2Q6Y1H2 254 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 TMPRSS11FQ6ZWK6 438 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 MBOAT2Q6ZWT7 520 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 FAM122BQ7Z309 247 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 KCTD20Q7Z5Y7 419 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 OAFQ86UD1 273 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 OR1J2Q8NGS2 313 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 OR1J1Q8NGS3 322 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 SLC25A40Q8TBP6 338 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 SLC7A13Q8TCU3 470 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 GEMIN6Q8WXD5 167 aaKnown RBP6.17□□□□□ -1.42
SSR1-206ENST00000479365 C11orf40Q8WZ69 217 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 LZICQ8WZA0 190 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 MARS2Q96GW9 593 aaKnown RBP6.17□□□□□ -1.42
SSR1-206ENST00000479365 Q96M85 177 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 KRTAP4-12Q9BQ66 201 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 FNDC11Q9BVV2 318 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 C19orf24Q9BVV8 132 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 ZNF416Q9BWM5 594 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 BCL2L14Q9BZR8 327 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 OR2J1Q9GZK6 312 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 LPAR2Q9HBW0 351 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 CCNB1IP1Q9NPC3 277 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 MRPS18AQ9NVS2 196 aaKnown RBP6.17□□□□□ -1.42
SSR1-206ENST00000479365 FAM30AQ9NZY2 134 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 STX18Q9P2W9 335 aaKnown RBP6.17□□□□□ -1.42
SSR1-206ENST00000479365 ABCD2Q9UBJ2 740 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 ENPP4Q9Y6X5 453 aa6.17□□□□□ -1.42
SSR1-206ENST00000479365 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.17□□□□□ -1.422e-8■■□□□ 12.6
SSR1-206ENST00000479365 TEX13CA0A0J9YWL9 993 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 A6NIZ1 184 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 DBX1A6NMT0 343 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.16□□□□□ -1.42
SSR1-206ENST00000479365 B4DSR2 109 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 CCDC22O60826 627 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 DIRAS1O95057 198 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 SCGB1D1O95968 90 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 PTHP01270 115 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 IGHV1-46P01743 117 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 MSMBP08118 114 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 CD14P08571 375 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 CTLA4P16410 223 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 HNF1AP20823 631 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 MSR1P21757 451 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 CFPP27918 469 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 CRYBB2P43320 205 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 SLC9A3P48764 834 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 GDI2P50395 445 aaKnown RBP6.16□□□□□ -1.42
SSR1-206ENST00000479365 TMEM33P57088 247 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 RAP1BP61224 184 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 PSME3P61289 254 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 RAP1AP62834 184 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 SEC23BQ15437 767 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 PCGF3Q3KNV8 242 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 GAGE13Q4V321 117 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 TMEM154Q6P9G4 183 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 ZNF730Q6ZMV8 503 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 RINLQ6ZS11 566 aa6.16□□□□□ -1.42
SSR1-206ENST00000479365 RNF113BQ8IZP6 322 aaKnown RBP6.16□□□□□ -1.42
SSR1-206ENST00000479365 RNF148Q8N7C7 305 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms