RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 ZNF467Q7Z7K2 595 aaPredicted RBP19.06■□□□□ 0.64
SDF4-206ENST00000478938 FJX1Q86VR8 437 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 ZNF101Q8IZC7 436 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 OR5AR1Q8NGP9 310 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 RNF128Q8TEB7 428 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 GLYATL1Q969I3 302 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 TSSK2Q96PF2 358 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 SPHK2Q9NRA0 654 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 SLC17A5Q9NRA2 495 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 CUTCQ9NTM9 273 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 TAAR5O14804 337 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 TACSTD2P09758 323 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 RPL4P36578 427 aaKnown RBP19.06■□□□□ 0.64
SDF4-206ENST00000478938 EIPR1Q53HC9 387 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 ZNF595Q8IYB9 648 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 SUMF2Q8NBJ7 301 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 MFSD8Q8NHS3 518 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 C2orf15Q8WU43 125 aaKnown RBP19.06■□□□□ 0.64
SDF4-206ENST00000478938 MCHR2Q969V1 340 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 RBM18Q96H35 190 aaKnown RBP19.06■□□□□ 0.64
SDF4-206ENST00000478938 ADAD1Q96M93 576 aaKnown RBP19.06■□□□□ 0.64
SDF4-206ENST00000478938 CASD1Q96PB1 797 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 STACQ99469 402 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 RARRES2Q99969 163 aa19.06■□□□□ 0.64
SDF4-206ENST00000478938 ABT1Q9ULW3 272 aaKnown RBP19.06■□□□□ 0.64
SDF4-206ENST00000478938 TCF20Q9UGU0 1960 aaKnown RBP19.06■□□□□ 0.64
SDF4-206ENST00000478938 M0R143 59 aa19.05■□□□□ 0.64
SDF4-206ENST00000478938 RPS27P42677 84 aaKnown RBP19.05■□□□□ 0.64
SDF4-206ENST00000478938 CEBPGP53567 150 aa19.05■□□□□ 0.64
SDF4-206ENST00000478938 UCP2P55851 309 aa19.05■□□□□ 0.64
SDF4-206ENST00000478938 TRAPPC6BQ86SZ2 158 aa19.05■□□□□ 0.64
SDF4-206ENST00000478938 TRAM1L1Q8N609 369 aa19.05■□□□□ 0.64
SDF4-206ENST00000478938 TIFAQ96CG3 184 aa19.05■□□□□ 0.64
SDF4-206ENST00000478938 OR2M4Q96R27 311 aa19.05■□□□□ 0.64
SDF4-206ENST00000478938 PRDM7Q9NQW5 492 aa19.05■□□□□ 0.64
SDF4-206ENST00000478938 CGGBP1Q9UFW8 167 aaPredicted RBP19.05■□□□□ 0.64
SDF4-206ENST00000478938 MRPS18CQ9Y3D5 142 aaKnown RBP19.05■□□□□ 0.64
SDF4-206ENST00000478938 GEMIN2O14893 280 aaKnown RBP19.05■□□□□ 0.64
SDF4-206ENST00000478938 SLC35G4P0C7Q5 338 aa19.05■□□□□ 0.64
SDF4-206ENST00000478938 CSNK2A2P19784 350 aaPredicted RBP19.05■□□□□ 0.64
SDF4-206ENST00000478938 CAMLGP49069 296 aa19.05■□□□□ 0.64
SDF4-206ENST00000478938 NPY4RP50391 375 aa19.05■□□□□ 0.64
SDF4-206ENST00000478938 RPUSD3Q6P087 351 aaKnown RBP19.05■□□□□ 0.64
SDF4-206ENST00000478938 ZNF679Q8IYX0 411 aa19.05■□□□□ 0.64
SDF4-206ENST00000478938 COMMD1Q8N668 190 aa19.05■□□□□ 0.64
SDF4-206ENST00000478938 TERB2Q8NHR7 220 aa19.05■□□□□ 0.64
SDF4-206ENST00000478938 DOK4Q8TEW6 326 aa19.05■□□□□ 0.64
SDF4-206ENST00000478938 CMBLQ96DG6 245 aa19.05■□□□□ 0.64
SDF4-206ENST00000478938 COMMD4Q9H0A8 199 aa19.05■□□□□ 0.64
SDF4-206ENST00000478938 CAPN10Q9HC96 672 aa19.05■□□□□ 0.64
SDF4-206ENST00000478938 ADAP2Q9NPF8 381 aa19.05■□□□□ 0.64
SDF4-206ENST00000478938 ABHD16AO95870 558 aa19.04■□□□□ 0.64
SDF4-206ENST00000478938 KLK2P20151 261 aa19.04■□□□□ 0.64
SDF4-206ENST00000478938 AFF3P51826 1226 aaKnown RBP19.04■□□□□ 0.64
SDF4-206ENST00000478938 ZNF658BQ4V348 819 aaPredicted RBP19.04■□□□□ 0.64
SDF4-206ENST00000478938 DMRTA1Q5VZB9 504 aa19.04■□□□□ 0.64
SDF4-206ENST00000478938 ASPHD2Q6ICH7 369 aa19.04■□□□□ 0.64
SDF4-206ENST00000478938 VITQ6UXI7 678 aa19.04■□□□□ 0.64
SDF4-206ENST00000478938 GAL3ST4Q96RP7 486 aa19.04■□□□□ 0.64
SDF4-206ENST00000478938 ALG12Q9BV10 488 aa19.04■□□□□ 0.64
SDF4-206ENST00000478938 CREBZFQ9NS37 354 aa19.04■□□□□ 0.64
SDF4-206ENST00000478938 FBXO34Q9NWN3 711 aa19.04■□□□□ 0.64
SDF4-206ENST00000478938 H3BQ15 152 aa19.04■□□□□ 0.64
SDF4-206ENST00000478938 DVL1O14640 695 aa19.04■□□□□ 0.64
SDF4-206ENST00000478938 PI3P19957 117 aa19.04■□□□□ 0.64
SDF4-206ENST00000478938 TRA2AQ13595 282 aaKnown RBP eCLIP19.04■□□□□ 0.64
SDF4-206ENST00000478938 GLYATL3Q5SZD4 288 aa19.04■□□□□ 0.64
SDF4-206ENST00000478938 LINC01590Q5TEZ4 76 aa19.04■□□□□ 0.64
SDF4-206ENST00000478938 TMEM106CQ9BVX2 250 aa19.04■□□□□ 0.64
SDF4-206ENST00000478938 DOCK3Q8IZD9 2030 aa19.04■□□□□ 0.64
SDF4-206ENST00000478938 SYT7O43581 403 aa19.03■□□□□ 0.64
SDF4-206ENST00000478938 FCARP24071 287 aa19.03■□□□□ 0.64
SDF4-206ENST00000478938 HOXC8P31273 242 aa19.03■□□□□ 0.64
SDF4-206ENST00000478938 SPEM2Q0P670 501 aa19.03■□□□□ 0.64
SDF4-206ENST00000478938 FAM166AQ6J272 317 aa19.03■□□□□ 0.64
SDF4-206ENST00000478938 C22orf39Q6P5X5 142 aa19.03■□□□□ 0.64
SDF4-206ENST00000478938 ZNF550Q7Z398 422 aa19.03■□□□□ 0.64
SDF4-206ENST00000478938 PTCHD1Q96NR3 888 aa19.03■□□□□ 0.64
SDF4-206ENST00000478938 METTL8Q9H825 291 aaKnown RBP19.03■□□□□ 0.64
SDF4-206ENST00000478938 ASCL3Q9NQ33 180 aa19.03■□□□□ 0.64
SDF4-206ENST00000478938 ADAM29Q9UKF5 820 aa19.03■□□□□ 0.64
SDF4-206ENST00000478938 PGA4P0DJD7 388 aa19.03■□□□□ 0.64
SDF4-206ENST00000478938 PGA5P0DJD9 388 aa19.03■□□□□ 0.64
SDF4-206ENST00000478938 TLX1P31314 330 aaPredicted RBP19.03■□□□□ 0.64
SDF4-206ENST00000478938 PPP1CCP36873 323 aaKnown RBP19.03■□□□□ 0.64
SDF4-206ENST00000478938 TOMM20Q15388 145 aa19.03■□□□□ 0.64
SDF4-206ENST00000478938 MFSD12Q6NUT3 480 aa19.03■□□□□ 0.64
SDF4-206ENST00000478938 DNAJA3Q96EY1 480 aa19.03■□□□□ 0.64
SDF4-206ENST00000478938 SLC22A12Q96S37 553 aa19.03■□□□□ 0.64
SDF4-206ENST00000478938 CERS4Q9HA82 394 aa19.03■□□□□ 0.64
SDF4-206ENST00000478938 KCNK6Q9Y257 313 aa19.03■□□□□ 0.64
SDF4-206ENST00000478938 TMEM269A0A1B0GVZ9 245 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 WIPF3A6NGB9 483 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 DDNO94850 711 aaPredicted RBP19.02■□□□□ 0.64
SDF4-206ENST00000478938 NDUFB2O95178 105 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 AMBPP02760 352 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 GDI1P31150 447 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 FCGR2CP31995 323 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 GABRA4P48169 554 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 UBE2KP61086 200 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms