RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 ZDHHC11Q9H8X9 412 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 MED4Q9NPJ6 270 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 ETNK2Q9NVF9 386 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 ZNF639Q9UID6 485 aa2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 RRP15Q9Y3B9 282 aaKnown RBP2.85□□□□□ -1.95
CDC42BPA-212ENST00000478573 SPTBP11277 2137 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 hCG_1818297A0A087WSY0 165 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 A0A0G2JRQ6 117 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 A0A0J9YYE9 177 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 A0A1W2PPE3 182 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 TRIM64CA6NLI5 447 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 HACD1B0YJ81 288 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 H0Y8G0 127 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 TMX2-CTNND1H3BSU7 103 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 APOC4-APOC2K7ER74 178 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 DCTN6O00399 190 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 RAD51BO15315 384 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 SPOPO43791 374 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 ATP5LO75964 103 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 TRBC1P01850 177 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 APOC2P02655 101 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 HLA-DQB2P05538 268 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 KLK2P20151 261 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 NPR2P20594 1047 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 KDELR1P24390 212 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 HTR1FP30939 366 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 DDOSTP39656 456 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 CDKN2BP42772 138 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 HLCSP50747 726 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 STC1P52823 247 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 PKNOX1P55347 436 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 BIDP55957 195 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 EIF3IQ13347 325 aaKnown RBP2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 XRCC4Q13426 336 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 TFDP2Q14188 446 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 TFDP3Q5H9I0 405 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 C6orf226Q5I0X4 101 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 CTSL3PQ5NE16 218 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 ARMC12Q5T9G4 340 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 Q6ZSR6 202 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 H2BFWTQ7Z2G1 175 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 KATNAL2Q8IYT4 538 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 CEND1Q8N111 149 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 EID2Q8N6I1 236 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 PQLC3Q8N755 202 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 CCDC71LQ8N9Z2 235 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 MNS1Q8NEH6 495 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 OR56A4Q8NGH8 313 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 DTX3LQ8TDB6 740 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 ANKRD49Q8WVL7 239 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 CHCHD10Q8WYQ3 142 aaPredicted RBP2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 RAPGEF5Q92565 580 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 KLK6Q92876 244 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 PDXPQ96GD0 296 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 COX14Q96I36 57 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 CYYR1Q96J86 154 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 QKIQ96PU8 341 aaKnown RBP eCLIP2.84□□□□□ -1.954e-11■■■■■ 27.6
CDC42BPA-212ENST00000478573 CLCC1Q96S66 551 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 RNF2Q99496 336 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 VAT1Q99536 393 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 CHP1Q99653 195 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 NICN1Q9BSH3 213 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 REEP4Q9H6H4 257 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 SUDS3Q9H7L9 328 aaPredicted RBP2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 PTGES2Q9H7Z7 377 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 NIPAL2Q9H841 368 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 NT5MQ9NPB1 228 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 RPL36Q9Y3U8 105 aaKnown RBP2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 U3KQA8 63 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 SCN2AQ99250 2005 aa2.84□□□□□ -1.95
CDC42BPA-212ENST00000478573 SEC16AO15027 2179 aa2.84□□□□□ -1.96
CDC42BPA-212ENST00000478573 DMXL2Q8TDJ6 3036 aa2.84□□□□□ -1.96
CDC42BPA-212ENST00000478573 EXPH5Q8NEV8 1989 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 MED13Q9UHV7 2174 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 IGHV1OR21-1A0A087WYE8 117 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 HELTA6NFD8 242 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 MIF4GDA9UHW6 222 aaKnown RBP2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 D6RAR5 112 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 UBXN8O00124 270 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 RGS16O15492 202 aaPredicted RBP2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZW10O43264 779 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 SNAPINO95295 136 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 STAMBPO95630 424 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 LY6G6DO95868 133 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 LGI1O95970 557 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 SOD1P00441 154 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 TNFP01375 233 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 FGF1P05230 155 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 CTSEP14091 401 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 CCNB1P14635 433 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 IL12AP29459 219 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 PBLDP30039 288 aaPredicted RBP2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 MAGEA1P43355 309 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 UCNP55089 124 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 ACTR3P61158 418 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 MAXP61244 160 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 CDK16Q00536 496 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 GBE1Q04446 702 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 DNAJC3Q13217 504 aa2.83□□□□□ -1.96
CDC42BPA-212ENST00000478573 SPA17Q15506 151 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms