RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 USH1CQ9Y6N9 552 aa16.69■□□□□ 0.26
PDLIM1-202ENST00000477757 H7C1C5 153 aa16.68■□□□□ 0.26
PDLIM1-202ENST00000477757 FBP2O00757 339 aa16.68■□□□□ 0.26
PDLIM1-202ENST00000477757 HLA-DPB1P04440 258 aa16.68■□□□□ 0.26
PDLIM1-202ENST00000477757 FBP1P09467 338 aa16.68■□□□□ 0.26
PDLIM1-202ENST00000477757 FPR3P25089 353 aa16.68■□□□□ 0.26
PDLIM1-202ENST00000477757 CTXN1P60606 82 aa16.68■□□□□ 0.26
PDLIM1-202ENST00000477757 LCN6P62502 163 aa16.68■□□□□ 0.26
PDLIM1-202ENST00000477757 DBPQ10586 325 aaPredicted RBP16.68■□□□□ 0.26
PDLIM1-202ENST00000477757 PDZD9Q8IXQ8 264 aa16.68■□□□□ 0.26
PDLIM1-202ENST00000477757 MREGQ8N565 214 aa16.68■□□□□ 0.26
PDLIM1-202ENST00000477757 SLC26A7Q8TE54 656 aa16.68■□□□□ 0.26
PDLIM1-202ENST00000477757 RASSF5Q8WWW0 418 aa16.68■□□□□ 0.26
PDLIM1-202ENST00000477757 CENPHQ9H3R5 247 aa16.68■□□□□ 0.26
PDLIM1-202ENST00000477757 TMEM100Q9NV29 134 aa16.68■□□□□ 0.26
PDLIM1-202ENST00000477757 RIMS3Q9UJD0 308 aa16.68■□□□□ 0.26
PDLIM1-202ENST00000477757 ELOVL7A1L3X0 281 aa16.67■□□□□ 0.26
PDLIM1-202ENST00000477757 ADAM20O43506 726 aa16.67■□□□□ 0.26
PDLIM1-202ENST00000477757 DBHP09172 617 aa16.67■□□□□ 0.26
PDLIM1-202ENST00000477757 GABRA5P31644 462 aa16.67■□□□□ 0.26
PDLIM1-202ENST00000477757 CD200P41217 278 aa16.67■□□□□ 0.26
PDLIM1-202ENST00000477757 MTPNP58546 118 aa16.67■□□□□ 0.26
PDLIM1-202ENST00000477757 ARF6P62330 175 aa16.67■□□□□ 0.26
PDLIM1-202ENST00000477757 HOXA4Q00056 320 aaPredicted RBP16.67■□□□□ 0.26
PDLIM1-202ENST00000477757 CFHR4Q92496 578 aa16.67■□□□□ 0.26
PDLIM1-202ENST00000477757 ECSITQ9BQ95 431 aa16.67■□□□□ 0.26
PDLIM1-202ENST00000477757 SEMA6AQ9H2E6 1030 aa16.67■□□□□ 0.26
PDLIM1-202ENST00000477757 CAB39Q9Y376 341 aaPredicted RBP16.67■□□□□ 0.26
PDLIM1-202ENST00000477757 TMEM120BA0PK00 339 aa16.66■□□□□ 0.26
PDLIM1-202ENST00000477757 LGALS8O00214 317 aa16.66■□□□□ 0.26
PDLIM1-202ENST00000477757 POLR3GO15318 223 aaPredicted RBP16.66■□□□□ 0.26
PDLIM1-202ENST00000477757 PIN1Q13526 163 aaPredicted RBP16.66■□□□□ 0.26
PDLIM1-202ENST00000477757 SELPLGQ14242 412 aa16.66■□□□□ 0.26
PDLIM1-202ENST00000477757 C11orf91Q3C1V1 193 aa16.66■□□□□ 0.26
PDLIM1-202ENST00000477757 CCDC92Q53HC0 331 aaPredicted RBP16.66■□□□□ 0.26
PDLIM1-202ENST00000477757 OXLD1Q5BKU9 147 aa16.66■□□□□ 0.26
PDLIM1-202ENST00000477757 INTS11Q5TA45 600 aaKnown RBP16.66■□□□□ 0.26
PDLIM1-202ENST00000477757 PRAMEF6Q5VXH4 476 aa16.66■□□□□ 0.26
PDLIM1-202ENST00000477757 SLC35E4Q6ICL7 350 aa16.66■□□□□ 0.26
PDLIM1-202ENST00000477757 DHDDSQ86SQ9 333 aa16.66■□□□□ 0.26
PDLIM1-202ENST00000477757 BPIFA2Q96DR5 249 aa16.66■□□□□ 0.26
PDLIM1-202ENST00000477757 SH3GLB1Q9Y371 365 aa16.66■□□□□ 0.26
PDLIM1-202ENST00000477757 KPTNQ9Y664 436 aa16.66■□□□□ 0.26
PDLIM1-202ENST00000477757 TEX13CA0A0J9YWL9 993 aa16.65■□□□□ 0.26
PDLIM1-202ENST00000477757 A0A1B0GVI7 797 aa16.65■□□□□ 0.26
PDLIM1-202ENST00000477757 HTR3EA5X5Y0 456 aa16.65■□□□□ 0.26
PDLIM1-202ENST00000477757 RNASEK-C17orf49H0YIS7 233 aa16.65■□□□□ 0.26
PDLIM1-202ENST00000477757 XPNPEP2O43895 674 aa16.65■□□□□ 0.26
PDLIM1-202ENST00000477757 OR10H3O60404 316 aa16.65■□□□□ 0.26
PDLIM1-202ENST00000477757 EFNB2P52799 333 aa16.65■□□□□ 0.26
PDLIM1-202ENST00000477757 MPPED2Q15777 294 aa16.65■□□□□ 0.26
PDLIM1-202ENST00000477757 CDONQ4KMG0 1287 aa16.65■□□□□ 0.26
PDLIM1-202ENST00000477757 C11orf88Q6PI97 169 aa16.65■□□□□ 0.26
PDLIM1-202ENST00000477757 VMO1Q7Z5L0 202 aa16.65■□□□□ 0.26
PDLIM1-202ENST00000477757 NPRL2Q8WTW4 380 aa16.65■□□□□ 0.26
PDLIM1-202ENST00000477757 SGCDQ92629 289 aa16.65■□□□□ 0.26
PDLIM1-202ENST00000477757 KAT8Q9H7Z6 458 aaKnown RBP16.65■□□□□ 0.26
PDLIM1-202ENST00000477757 WDR76Q9H967 626 aa16.65■□□□□ 0.26
PDLIM1-202ENST00000477757 TRIM36Q9NQ86 728 aa16.65■□□□□ 0.26
PDLIM1-202ENST00000477757 UFSP2Q9NUQ7 469 aa16.65■□□□□ 0.26
PDLIM1-202ENST00000477757 RNF7Q9UBF6 113 aa16.65■□□□□ 0.26
PDLIM1-202ENST00000477757 TRAV27A0A087WT01 109 aa16.64■□□□□ 0.25
PDLIM1-202ENST00000477757 ANKRD61A6NGH8 418 aa16.64■□□□□ 0.25
PDLIM1-202ENST00000477757 NDUFA2O43678 99 aa16.64■□□□□ 0.25
PDLIM1-202ENST00000477757 FCN3O75636 299 aa16.64■□□□□ 0.25
PDLIM1-202ENST00000477757 ECDO95905 644 aaPredicted RBP16.64■□□□□ 0.25
PDLIM1-202ENST00000477757 VSIG8P0DPA2 414 aa16.64■□□□□ 0.25
PDLIM1-202ENST00000477757 CTLA4P16410 223 aa16.64■□□□□ 0.25
PDLIM1-202ENST00000477757 TNFRSF1BP20333 461 aa16.64■□□□□ 0.25
PDLIM1-202ENST00000477757 LSM6P62312 80 aaKnown RBP16.64■□□□□ 0.25
PDLIM1-202ENST00000477757 FHL1Q13642 323 aa16.64■□□□□ 0.25
PDLIM1-202ENST00000477757 AGKQ53H12 422 aa16.64■□□□□ 0.25
PDLIM1-202ENST00000477757 SFRP4Q6FHJ7 346 aaPredicted RBP16.64■□□□□ 0.25
PDLIM1-202ENST00000477757 METAP1DQ6UB28 335 aaPredicted RBP16.64■□□□□ 0.25
PDLIM1-202ENST00000477757 CCDC80Q76M96 950 aa16.64■□□□□ 0.25
PDLIM1-202ENST00000477757 BTN2A1Q7KYR7 527 aa16.64■□□□□ 0.25
PDLIM1-202ENST00000477757 OR5R1Q8NH85 324 aa16.64■□□□□ 0.25
PDLIM1-202ENST00000477757 HCAR1Q9BXC0 346 aa16.64■□□□□ 0.25
PDLIM1-202ENST00000477757 TOR3AQ9H497 397 aa16.64■□□□□ 0.25
PDLIM1-202ENST00000477757 RER1O15258 196 aa16.63■□□□□ 0.25
PDLIM1-202ENST00000477757 AHCYL1O43865 530 aa16.63■□□□□ 0.25
PDLIM1-202ENST00000477757 IFI30P13284 250 aa16.63■□□□□ 0.25
PDLIM1-202ENST00000477757 ANKDD1AQ495B1 522 aa16.63■□□□□ 0.25
PDLIM1-202ENST00000477757 BEND6Q5SZJ8 279 aaPredicted RBP16.63■□□□□ 0.25
PDLIM1-202ENST00000477757 OTPQ5XKR4 325 aa16.63■□□□□ 0.25
PDLIM1-202ENST00000477757 C11orf44Q8N8P7 122 aa16.63■□□□□ 0.25
PDLIM1-202ENST00000477757 OR51A7Q8NH64 312 aa16.63■□□□□ 0.25
PDLIM1-202ENST00000477757 ZNF583Q96ND8 569 aa16.63■□□□□ 0.25
PDLIM1-202ENST00000477757 CGREF1Q99674 301 aa16.63■□□□□ 0.25
PDLIM1-202ENST00000477757 RASSF4Q9H2L5 321 aa16.63■□□□□ 0.25
PDLIM1-202ENST00000477757 PPA2Q9H2U2 334 aa16.63■□□□□ 0.25
PDLIM1-202ENST00000477757 FN3KRPQ9HA64 309 aa16.63■□□□□ 0.25
PDLIM1-202ENST00000477757 RPUSD1Q9UJJ7 312 aaKnown RBP16.63■□□□□ 0.25
PDLIM1-202ENST00000477757 FOXJ3Q9UPW0 622 aa16.63■□□□□ 0.25
PDLIM1-202ENST00000477757 SIGLEC9Q9Y336 463 aa16.63■□□□□ 0.25
PDLIM1-202ENST00000477757 TRAV38-1A0A0B4J264 116 aa16.62■□□□□ 0.25
PDLIM1-202ENST00000477757 OOEPA6NGQ2 149 aa16.62■□□□□ 0.25
PDLIM1-202ENST00000477757 SHOX2O60902 331 aaPredicted RBP16.62■□□□□ 0.25
PDLIM1-202ENST00000477757 PTBP3O95758 552 aaKnown RBP16.62■□□□□ 0.25
PDLIM1-202ENST00000477757 PRSS12P56730 875 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms