RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 CENPMQ9NSP4 180 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 SLCO1C1Q9NYB5 712 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 LAMP5Q9UJQ1 280 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 USF3Q68DE3 2245 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 MYO9AB2RTY4 2548 aa11.29□□□□□ -0.6
TOP3A-205ENST00000477508 CSMD1Q96PZ7 3565 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 IGLV3-9A0A075B6K5 115 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 TMEM129A0AVI4 362 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 M0R135 149 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 PHYHO14832 338 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 SELENOFO60613 162 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 IGHV3-13P01766 116 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 MT-ND5P03915 603 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 DBHP09172 617 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 ACSM4P0C7M7 580 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 ALOX5APP20292 161 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 OTX1P32242 354 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-205ENST00000477508 LIPAP38571 399 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 NAA10P41227 235 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-205ENST00000477508 PTH2RP49190 550 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 PPOXP50336 477 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 ART1P52961 327 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 RSPO1Q2MKA7 263 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-205ENST00000477508 SHEQ5VZ18 495 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 MBNL2Q5VZF2 373 aaKnown RBP11.28□□□□□ -0.6
TOP3A-205ENST00000477508 DEGS2Q6QHC5 323 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 PRSS57Q6UWY2 283 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 COLCA1Q6ZS62 124 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 RFPL4BQ6ZWI9 263 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-205ENST00000477508 DHRSXQ8N5I4 330 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 OR10S1Q8NGN2 331 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 RHOXF1Q8NHV9 184 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 THEM6Q8WUY1 208 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 SLC7A6Q92536 515 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 ZNF799Q96GE5 643 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 MARS2Q96GW9 593 aaKnown RBP11.28□□□□□ -0.6
TOP3A-205ENST00000477508 C1QTNF5Q9BXJ0 243 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 MRPL37Q9BZE1 423 aaKnown RBP11.28□□□□□ -0.6
TOP3A-205ENST00000477508 OR51B6Q9H340 312 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 MS4A5Q9H3V2 200 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 NIPAL2Q9H841 368 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 CLN6Q9NWW5 311 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 NKX1-2Q9UD57 310 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-205ENST00000477508 CGGBP1Q9UFW8 167 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-205ENST00000477508 DUSP13Q9UII6 198 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 ARFGEF3Q5TH69 2177 aa11.28□□□□□ -0.6
TOP3A-205ENST00000477508 A0A1W2PPW3 197 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 H0YAE9 185 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 H0YJX3 145 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 M0R233 179 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 DLGAP1O14490 977 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 ZNF254O75437 659 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 NGFP01138 241 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 H2BFMP0C1H6 154 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 SBK2P0C263 348 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 PSKH1P11801 424 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 HSD11B1P28845 292 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 ATP6V1E1P36543 226 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 ATP5J2P56134 94 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 MALLQ13021 153 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 IL18R1Q13478 541 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 BCDIN3DQ7Z5W3 292 aaKnown RBP11.27□□□□□ -0.61
TOP3A-205ENST00000477508 SETD9Q8NE22 299 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 SLC25A40Q8TBP6 338 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 KLF14Q8TD94 323 aaPredicted RBP11.27□□□□□ -0.61
TOP3A-205ENST00000477508 OR2J1Q9GZK6 312 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 RAB1BQ9H0U4 201 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 ADGRL4Q9HBW9 690 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 DYNLRB1Q9NP97 96 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 CYSLTR2Q9NS75 346 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 DNAJC27Q9NZQ0 273 aa11.27□□□□□ -0.61
TOP3A-205ENST00000477508 RRP9O43818 475 aaKnown RBP11.26□□□□□ -0.61
TOP3A-205ENST00000477508 LCATP04180 440 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 OR2T7P0C7T2 308 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 RAC2P15153 192 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 DCTDP32321 178 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 CDKN1AP38936 164 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 OPRL1P41146 370 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 MTNR1AP48039 350 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 SLC6A9P48067 706 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 ROM1Q03395 351 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 NKPD1Q17RQ9 610 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 ZMAT1Q5H9K5 638 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 KRT77Q7Z794 578 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 ENTHD1Q8IYW4 607 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 OR52H1Q8NGJ2 320 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 OR2T27Q8NH04 317 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 SNX33Q8WV41 574 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 CYGBQ8WWM9 190 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 UBE2FQ969M7 185 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 PERPQ96FX8 193 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 MYCBPQ99417 103 aaPredicted RBP11.26□□□□□ -0.61
TOP3A-205ENST00000477508 SYT3Q9BQG1 590 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 MROQ9BYG7 248 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 TAAR3PQ9P1P4 343 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 ITGB1BP2Q9UKP3 347 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 STARD10Q9Y365 291 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 PCDHGB1Q9Y5G3 927 aa11.26□□□□□ -0.61
TOP3A-205ENST00000477508 HSPE1-MOB4S4R3N1 261 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms