RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 DNAJB11Q9UBS4 358 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 ZNF281Q9Y2X9 895 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 ADAM18Q9Y3Q7 739 aa5.55□□□□□ -1.52
RTFDC1-206ENST00000477485 IGHV1-69DA0A0B4J2H0 117 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 A0A1W2PRD5 423 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 A0A1W2PRF3 423 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 A0A1W2PRM7 423 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 hCG_1807616A0A1W2PRN6 198 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 OR6C6A6NF89 314 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 SOCS2O14508 198 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 TNFRSF13BO14836 293 aaPredicted RBP5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 RER1O15258 196 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 SLC16A7O60669 478 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 FAM20BO75063 409 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 CLPXO76031 633 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 PAHP00439 452 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 IFNA14P01570 189 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 IGHV1-69P01742 117 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 CTLA4P16410 223 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 CPT2P23786 658 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 GPR4P46093 362 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 MRPL19P49406 292 aaKnown RBP5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 RGS6P49758 472 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 NPY4RP50391 375 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 PROK1P58294 105 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 RPL15P61313 204 aaKnown RBP5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 ARF6P62330 175 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 EGR3Q06889 387 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 ST3GAL3Q11203 375 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 OR8G1Q15617 311 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 KCNJ8Q15842 424 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 FBLN7Q53RD9 439 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 TNFAIP8L3Q5GJ75 292 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 RABL3Q5HYI8 236 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 GDPGP1Q6ZNW5 385 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 Q6ZSV7 163 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 Q6ZTK2 550 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 FOXL2NBQ6ZUU3 175 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 LNX2Q8N448 690 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 C11orf44Q8N8P7 122 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 PCYOX1LQ8NBM8 494 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 MRAPQ8TCY5 172 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 SPRYD4Q8WW59 207 aaPredicted RBP5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 LRTOMTQ8WZ04 291 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 APOBEC3DQ96AK3 386 aaPredicted RBP5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 Q96M85 177 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 C7orf26Q96N11 449 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 TBX15Q96SF7 602 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 ECSITQ9BQ95 431 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 WACQ9BTA9 647 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 FNDC11Q9BVV2 318 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 POLR2J2Q9GZM3 115 aaKnown RBP5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 POLR2J3Q9H1A7 115 aaKnown RBP5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 SYT4Q9H2B2 425 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 SEMA6AQ9H2E6 1030 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 DPAGT1Q9H3H5 408 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 PRDM13Q9H4Q3 707 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 CTSZQ9UBR2 303 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 RPS6KA6Q9UK32 745 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 COA3Q9Y2R0 106 aaPredicted RBP5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 GMEB1Q9Y692 573 aa5.54□□□□□ -1.52
RTFDC1-206ENST00000477485 IGHV3OR15-7A0A075B7D8 119 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 TEX13CA0A0J9YWL9 993 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 ZNF816-ZNF321PA0A0X1KG74 233 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 A6NLC8 198 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 IQCF6A8MYZ5 107 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 F5H5K5 113 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 OR10H3O60404 316 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 KHDRBS3O75525 346 aaKnown RBP5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 IGF2P01344 180 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 GYPAP02724 150 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 LIPFP07098 398 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 GRPP07492 148 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 FBP1P09467 338 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 TSPAN19P0C672 248 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 CA6P23280 308 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 PMELP40967 661 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 IER3P46695 156 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 CRYBA2P53672 197 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 PRB3Q04118 309 aaPredicted RBP5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 POU4F2Q12837 409 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 ECH1Q13011 328 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 MALLQ13021 153 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 KRR1Q13601 381 aaKnown RBP5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 CYLC2Q14093 348 aaPredicted RBP5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 MPPED2Q15777 294 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 MEP1BQ16820 701 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 ZNF181Q2M3W8 571 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 CCDC92Q53HC0 331 aaPredicted RBP5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 CYBRD1Q53TN4 286 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 MESTQ5EB52 335 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 BEND6Q5SZJ8 279 aaPredicted RBP5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 CORO6Q6QEF8 472 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 FBXW12Q6X9E4 464 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 ZNF730Q6ZMV8 503 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 RRM2BQ7LG56 351 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 MRPL21Q7Z2W9 205 aaKnown RBP5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 VMO1Q7Z5L0 202 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 GLB1L2Q8IW92 636 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 DPP10Q8N608 796 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms