RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 PARP8Q8N3A8 854 aa9.52□□□□□ -0.89
HDLBP-236ENST00000477477 GJC3Q8NFK1 279 aa9.52□□□□□ -0.89
HDLBP-236ENST00000477477 DHRS1Q96LJ7 313 aa9.52□□□□□ -0.89
HDLBP-236ENST00000477477 ZNF582Q96NG8 517 aaPredicted RBP9.52□□□□□ -0.89
HDLBP-236ENST00000477477 TSSK2Q96PF2 358 aa9.52□□□□□ -0.89
HDLBP-236ENST00000477477 FUZQ9BT04 418 aa9.52□□□□□ -0.89
HDLBP-236ENST00000477477 MS4A7Q9GZW8 240 aaPredicted RBP9.52□□□□□ -0.89
HDLBP-236ENST00000477477 EFCAB1Q9HAE3 211 aa9.52□□□□□ -0.89
HDLBP-236ENST00000477477 TMEM165Q9HC07 324 aa9.52□□□□□ -0.89
HDLBP-236ENST00000477477 KRCC1Q9NPI7 259 aaPredicted RBP9.52□□□□□ -0.89
HDLBP-236ENST00000477477 MIOXQ9UGB7 285 aa9.52□□□□□ -0.89
HDLBP-236ENST00000477477 AURKCQ9UQB9 309 aa9.52□□□□□ -0.89
HDLBP-236ENST00000477477 IGHV2-70DA0A0C4DH43 119 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 IGHV3-64DA0A0J9YX35 117 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 A0A1B0GWJ7 208 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 F5H5P2 479 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 CLDN34H7C241 214 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 DIRAS1O95057 198 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 FSTL3O95633 263 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 PPP1R3DO95685 299 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 RNASE1P07998 156 aaKnown RBP9.51□□□□□ -0.89
HDLBP-236ENST00000477477 IGHV4-38-2P0DP08 117 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 SELEP16581 610 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 CENPAP49450 140 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 GNB2P62879 340 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 COX10Q12887 443 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 KRTAP27-1Q3LI81 207 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 ZNF404Q494X3 552 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 CORO6Q6QEF8 472 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 SMARCD3Q6STE5 483 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 LRRN1Q6UXK5 716 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 C9orf139Q6ZV77 190 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 MOGAT3Q86VF5 341 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 C1orf87Q8N0U7 546 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 FAM86B1Q8N7N1 296 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 BHLHE23Q8NDY6 225 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 SLC26A10Q8NG04 563 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 OR52E2Q8NGJ4 325 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 OR52J3Q8NH60 311 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 FANK1Q8TC84 345 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 DACT3Q96B18 629 aaPredicted RBP9.51□□□□□ -0.89
HDLBP-236ENST00000477477 UPRTQ96BW1 309 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 NEIL1Q96FI4 390 aaPredicted RBP9.51□□□□□ -0.89
HDLBP-236ENST00000477477 PLEKHA8Q96JA3 519 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 C7orf34Q96L11 122 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 ERMAPQ96PL5 475 aaPredicted RBP9.51□□□□□ -0.89
HDLBP-236ENST00000477477 TMEM246Q9BRR3 403 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 WDR76Q9H967 626 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 B9D1Q9UPM9 204 aa9.51□□□□□ -0.89
HDLBP-236ENST00000477477 SAMD4AQ9UPU9 718 aaKnown RBP9.51□□□□□ -0.89
HDLBP-236ENST00000477477 IGHV3OR16-10A0A075B7F0 116 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 TRAV40A0A0B4J280 105 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 LRRC30A6NM36 301 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 PLATP00750 562 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 ACSM4P0C7M7 580 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 FPR3P25089 353 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 MDH1P40925 334 aaKnown RBP9.5□□□□□ -0.89
HDLBP-236ENST00000477477 PMELP40967 661 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 GATA4P43694 442 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 MTNR1AP48039 350 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 PSME3P61289 254 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 KRT72Q14CN4 511 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 SLC9A3R2Q15599 337 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 RSPO1Q2MKA7 263 aaPredicted RBP9.5□□□□□ -0.89
HDLBP-236ENST00000477477 FAM201AQ5SY85 155 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 GLYATQ6IB77 296 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 SLC18B1Q6NT16 456 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 LEG1Q6P5S2 330 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 CFAP77Q6ZQR2 320 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 JAZF1Q86VZ6 243 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 OR6V1Q8N148 313 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 OR8B3Q8NGG8 313 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 RAB40AQ8WXH6 277 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 SLC25A28Q96A46 364 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 OR8B2Q96RD0 313 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 NMNAT3Q96T66 252 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 HCAR1Q9BXC0 346 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 OR52D1Q9H346 318 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 ZNF696Q9H7X3 374 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 UNKLQ9H9P5 680 aaKnown RBP9.5□□□□□ -0.89
HDLBP-236ENST00000477477 DCAF13Q9NV06 445 aaKnown RBP9.5□□□□□ -0.89
HDLBP-236ENST00000477477 TMEM100Q9NV29 134 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 PKD1L1Q8TDX9 2849 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 TRRAPQ9Y4A5 3859 aa9.5□□□□□ -0.89
HDLBP-236ENST00000477477 ARPC3O15145 178 aa9.49□□□□□ -0.89
HDLBP-236ENST00000477477 RENP00797 406 aa9.49□□□□□ -0.89
HDLBP-236ENST00000477477 HLA-DPB1P04440 258 aa9.49□□□□□ -0.89
HDLBP-236ENST00000477477 HIST1H1CP16403 213 aaKnown RBP9.49□□□□□ -0.89
HDLBP-236ENST00000477477 SLC6A6P31641 620 aa9.49□□□□□ -0.89
HDLBP-236ENST00000477477 PITPNBP48739 271 aa9.49□□□□□ -0.89
HDLBP-236ENST00000477477 PRSS12P56730 875 aa9.49□□□□□ -0.89
HDLBP-236ENST00000477477 IL13RA1P78552 427 aa9.49□□□□□ -0.89
HDLBP-236ENST00000477477 DBPQ10586 325 aaPredicted RBP9.49□□□□□ -0.89
HDLBP-236ENST00000477477 GK2Q14410 553 aaPredicted RBP9.49□□□□□ -0.89
HDLBP-236ENST00000477477 RFX4Q33E94 735 aa9.49□□□□□ -0.89
HDLBP-236ENST00000477477 NLRC3Q7RTR2 1065 aa9.49□□□□□ -0.89
HDLBP-236ENST00000477477 ZBTB46Q86UZ6 589 aa9.49□□□□□ -0.89
HDLBP-236ENST00000477477 LINC00346Q8IVM7 164 aa9.49□□□□□ -0.89
HDLBP-236ENST00000477477 CELF2-AS1Q8N7Q2 184 aa9.49□□□□□ -0.89
HDLBP-236ENST00000477477 OR4K13Q8NH42 304 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms