RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 LPCAT4Q643R3 524 aa11.72□□□□□ -0.53
FAM3A-218ENST00000475657 KDM4DQ6B0I6 523 aa11.72□□□□□ -0.53
FAM3A-218ENST00000475657 FIP1L1Q6UN15 594 aaKnown RBP11.72□□□□□ -0.53
FAM3A-218ENST00000475657 CD300LDQ6UXZ3 194 aa11.72□□□□□ -0.53
FAM3A-218ENST00000475657 SLC35D2Q76EJ3 337 aa11.72□□□□□ -0.53
FAM3A-218ENST00000475657 PXKQ7Z7A4 578 aa11.72□□□□□ -0.53
FAM3A-218ENST00000475657 KLHL36Q8N4N3 616 aa11.72□□□□□ -0.53
FAM3A-218ENST00000475657 SLC30A7Q8NEW0 376 aa11.72□□□□□ -0.53
FAM3A-218ENST00000475657 FAM110DQ8TAY7 271 aaPredicted RBP11.72□□□□□ -0.53
FAM3A-218ENST00000475657 GNPDA2Q8TDQ7 276 aa11.72□□□□□ -0.53
FAM3A-218ENST00000475657 TAS2R5Q9NYW4 299 aa11.72□□□□□ -0.53
FAM3A-218ENST00000475657 ENOPH1Q9UHY7 261 aa11.72□□□□□ -0.53
FAM3A-218ENST00000475657 KLHL21Q9UJP4 597 aa11.72□□□□□ -0.53
FAM3A-218ENST00000475657 SOX21Q9Y651 276 aaPredicted RBP11.72□□□□□ -0.53
FAM3A-218ENST00000475657 SOCS2O14508 198 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 RNF13O43567 381 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 OR7A10O76100 309 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 IGHV1-46P01743 117 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 LCKP06239 509 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 SBK2P0C263 348 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 ZNF26P17031 533 aaPredicted RBP11.71□□□□□ -0.53
FAM3A-218ENST00000475657 PRKACGP22612 351 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 CPT2P23786 658 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 DAPP51397 102 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 MMP15P51511 669 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 BPIFB3P59826 476 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 C2orf68Q2NKX9 166 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 ANKDD1AQ495B1 522 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 VAX1Q5SQQ9 334 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 LRFN4Q6PJG9 635 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 LRRN1Q6UXK5 716 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 PAQR4Q8N4S7 273 aaPredicted RBP11.71□□□□□ -0.53
FAM3A-218ENST00000475657 LINC01006Q8NI28 216 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 NRG4Q8WWG1 115 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 GTF3AQ92664 365 aaKnown RBP11.71□□□□□ -0.53
FAM3A-218ENST00000475657 TMEM54Q969K7 222 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 ZDHHC16Q969W1 377 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 RDH12Q96NR8 316 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 NIPSNAP1Q9BPW8 284 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 CDH20Q9HBT6 801 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 TCF7L1Q9HCS4 588 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 NANSQ9NR45 359 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 GLTPQ9NZD2 209 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 ASH2LQ9UBL3 628 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 OR5V1Q9UGF6 321 aa11.71□□□□□ -0.53
FAM3A-218ENST00000475657 MDFIC2A0A1B0GVS7 189 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 F5H0A9 414 aaPredicted RBP11.7□□□□□ -0.54
FAM3A-218ENST00000475657 G3V4G9 280 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 CDC42EP2O14613 210 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 PTHP01270 115 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 ASAH2BP0C7U1 165 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 LIPAP38571 399 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 RAD23AP54725 363 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 ERVS71-1P61550 626 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 PAX2Q02962 417 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 TAF11Q15544 211 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 LRRC36Q1X8D7 754 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 DEFB112Q30KQ8 113 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 RFX4Q33E94 735 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 SAMD5Q5TGI4 173 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 Q6YL49 198 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 ZNF620Q6ZNG0 422 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 RASSF6Q6ZTQ3 369 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 DPPA2Q7Z7J5 298 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 OAFQ86UD1 273 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 JAZF1Q86VZ6 243 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 LRRC28Q86X40 367 aaPredicted RBP11.7□□□□□ -0.54
FAM3A-218ENST00000475657 SLC22A24Q8N4F4 322 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 CLDN22Q8N7P3 220 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 OR1J2Q8NGS2 313 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 SLC29A1Q99808 456 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 CHIAQ9BZP6 476 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 RNF121Q9H920 327 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 SMURF2Q9HAU4 748 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 PAPOLBQ9NRJ5 636 aaKnown RBP11.7□□□□□ -0.54
FAM3A-218ENST00000475657 CYSLTR2Q9NS75 346 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 KRT84Q9NSB2 600 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 ORC6Q9Y5N6 252 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 POMT1Q9Y6A1 747 aa11.7□□□□□ -0.54
FAM3A-218ENST00000475657 IGHV3OR16-10A0A075B7F0 116 aa11.69□□□□□ -0.54
FAM3A-218ENST00000475657 PLSCR5A0PG75 271 aa11.69□□□□□ -0.54
FAM3A-218ENST00000475657 UNC119BA6NIH7 251 aa11.69□□□□□ -0.54
FAM3A-218ENST00000475657 H0YJX3 145 aa11.69□□□□□ -0.54
FAM3A-218ENST00000475657 BLOC1S5-TXNDC5H3BN57 136 aa11.69□□□□□ -0.54
FAM3A-218ENST00000475657 SPRY3O43610 288 aa11.69□□□□□ -0.54
FAM3A-218ENST00000475657 HIST1H2ABP04908 130 aa11.69□□□□□ -0.54
FAM3A-218ENST00000475657 F13BP05160 661 aa11.69□□□□□ -0.54
FAM3A-218ENST00000475657 CD55P08174 381 aa11.69□□□□□ -0.54
FAM3A-218ENST00000475657 QDPRP09417 244 aa11.69□□□□□ -0.54
FAM3A-218ENST00000475657 TSPAN19P0C672 248 aa11.69□□□□□ -0.54
FAM3A-218ENST00000475657 FUT1P19526 365 aa11.69□□□□□ -0.54
FAM3A-218ENST00000475657 VHLP40337 213 aa11.69□□□□□ -0.54
FAM3A-218ENST00000475657 LOXL3P58215 753 aa11.69□□□□□ -0.54
FAM3A-218ENST00000475657 ESCO2Q56NI9 601 aa11.69□□□□□ -0.54
FAM3A-218ENST00000475657 RPL13AP3Q6NVV1 102 aa11.69□□□□□ -0.54
FAM3A-218ENST00000475657 BTNL3Q6UXE8 466 aa11.69□□□□□ -0.54
FAM3A-218ENST00000475657 HIST3H2AQ7L7L0 130 aa11.69□□□□□ -0.54
FAM3A-218ENST00000475657 NANOGNBQ7Z5D8 188 aa11.69□□□□□ -0.54
FAM3A-218ENST00000475657 OR13C2Q8NGS9 318 aa11.69□□□□□ -0.54
FAM3A-218ENST00000475657 OR6X1Q8NH79 312 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms