RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 WDR76Q9H967 626 aa10.35□□□□□ -0.75
CCDC57-208ENST00000475635 SAR1AQ9NR31 198 aa10.35□□□□□ -0.75
CCDC57-208ENST00000475635 TNFRSF19Q9NS68 423 aa10.35□□□□□ -0.75
CCDC57-208ENST00000475635 TMEM100Q9NV29 134 aa10.35□□□□□ -0.75
CCDC57-208ENST00000475635 VSX1Q9NZR4 365 aaPredicted RBP10.35□□□□□ -0.75
CCDC57-208ENST00000475635 GMPR2Q9P2T1 348 aaKnown RBP10.35□□□□□ -0.75
CCDC57-208ENST00000475635 A0A1B0GUS0 222 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 PHYHO14832 338 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 PTP4A3O75365 173 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 NDUFB2O95178 105 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 IRF2P14316 349 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 FPR3P25089 353 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 CENPAP49450 140 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 RAG2P55895 527 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 PRSS12P56730 875 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 SF3A3Q12874 501 aaKnown RBP eCLIP10.34□□□□□ -0.75
CCDC57-208ENST00000475635 KCNMB1Q16558 191 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 MEP1BQ16820 701 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 GPR157Q5UAW9 335 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 WDR25Q64LD2 544 aaPredicted RBP10.34□□□□□ -0.75
CCDC57-208ENST00000475635 RUSC1-AS1Q66K80 236 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 GPR139Q6DWJ6 353 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 CORO6Q6QEF8 472 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 FIP1L1Q6UN15 594 aaKnown RBP10.34□□□□□ -0.75
CCDC57-208ENST00000475635 LYPD2Q6UXB3 125 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 Q6YL49 198 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 DCDC5Q6ZRR9 648 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 PTCHD4Q6ZW05 846 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 FKBP9P1Q75LS8 142 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.34□□□□□ -0.75
CCDC57-208ENST00000475635 ADCK1Q86TW2 530 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 C19orf18Q8NEA5 215 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 GJC3Q8NFK1 279 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 OR4F5Q8NH21 305 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 SLC7A13Q8TCU3 470 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 HSH2DQ96JZ2 352 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 COQ7Q99807 217 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 HCAR1Q9BXC0 346 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 NUAK2Q9H093 628 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 HDHD2Q9H0R4 259 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 MARCH7Q9H992 704 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 BEX1Q9HBH7 125 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 NOX4Q9NPH5 578 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 NRIP3Q9NQ35 241 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 CMTM6Q9NX76 183 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 PDP1Q9P0J1 537 aaPredicted RBP10.34□□□□□ -0.75
CCDC57-208ENST00000475635 SIGLEC7Q9Y286 467 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 TMEM5Q9Y2B1 443 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 IER3IP1Q9Y5U9 82 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 LHFPL6Q9Y693 200 aa10.34□□□□□ -0.75
CCDC57-208ENST00000475635 A0A1B0GWJ7 208 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 C22orf46C9J442 243 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 CXCR6O00574 342 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 TROVE2P10155 538 aaKnown RBP eCLIP10.33□□□□□ -0.76
CCDC57-208ENST00000475635 CDKN2AP42771 156 aaKnown RBP10.33□□□□□ -0.76
CCDC57-208ENST00000475635 GATA4P43694 442 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 BPIFB3P59826 476 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 HIST1H3AP68431 136 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 RELBQ01201 579 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 MAB21L1Q13394 359 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 OCLNQ16625 522 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 HIST2H3PS2Q5TEC6 136 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 ZNF841Q6ZN19 808 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 HIST2H3AQ71DI3 136 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 CBLL1Q75N03 491 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 CYP4Z1Q86W10 505 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 OR11L1Q8NGX0 322 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 RCN3Q96D15 328 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 TSSK2Q96PF2 358 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 GPX7Q96SL4 187 aaPredicted RBP10.33□□□□□ -0.76
CCDC57-208ENST00000475635 PCGF1Q9BSM1 259 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 CHIAQ9BZP6 476 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 ANKRD19PQ9H560 264 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 C1RLQ9NZP8 487 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 RPS6KA6Q9UK32 745 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 TMCC3Q9ULS5 477 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 AP3M1Q9Y2T2 418 aa10.33□□□□□ -0.76
CCDC57-208ENST00000475635 DCTN6O00399 190 aa10.32□□□□□ -0.76
CCDC57-208ENST00000475635 GSTA4O15217 222 aa10.32□□□□□ -0.76
CCDC57-208ENST00000475635 ENSAO43768 121 aaKnown RBP10.32□□□□□ -0.76
CCDC57-208ENST00000475635 FAM20BO75063 409 aa10.32□□□□□ -0.76
CCDC57-208ENST00000475635 SERPINA1P01009 418 aa10.32□□□□□ -0.76
CCDC57-208ENST00000475635 SFTPBP07988 381 aa10.32□□□□□ -0.76
CCDC57-208ENST00000475635 MELTFP08582 738 aa10.32□□□□□ -0.76
CCDC57-208ENST00000475635 CRABP1P29762 137 aa10.32□□□□□ -0.76
CCDC57-208ENST00000475635 CFHR2P36980 270 aa10.32□□□□□ -0.76
CCDC57-208ENST00000475635 PSMB10P40306 273 aa10.32□□□□□ -0.76
CCDC57-208ENST00000475635 OMPP47874 163 aa10.32□□□□□ -0.76
CCDC57-208ENST00000475635 RPS6KA3P51812 740 aa10.32□□□□□ -0.76
CCDC57-208ENST00000475635 FXYD6P3P58550 94 aa10.32□□□□□ -0.76
CCDC57-208ENST00000475635 HOXA4Q00056 320 aaPredicted RBP10.32□□□□□ -0.76
CCDC57-208ENST00000475635 LIPEQ05469 1076 aa10.32□□□□□ -0.76
CCDC57-208ENST00000475635 COX10Q12887 443 aa10.32□□□□□ -0.76
CCDC57-208ENST00000475635 GK2Q14410 553 aaPredicted RBP10.32□□□□□ -0.76
CCDC57-208ENST00000475635 RSPO1Q2MKA7 263 aaPredicted RBP10.32□□□□□ -0.76
CCDC57-208ENST00000475635 KRTAP27-1Q3LI81 207 aa10.32□□□□□ -0.76
CCDC57-208ENST00000475635 CLEC12AQ5QGZ9 265 aa10.32□□□□□ -0.76
CCDC57-208ENST00000475635 PRAMEF6Q5VXH4 476 aa10.32□□□□□ -0.76
CCDC57-208ENST00000475635 OLFML2AQ68BL7 652 aa10.32□□□□□ -0.76
CCDC57-208ENST00000475635 PGM2L1Q6PCE3 622 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms