RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 TNFRSF1AP19438 455 aa13.14□□□□□ -0.31
SRRT-209ENST00000474896 TNFSF4P23510 183 aa13.14□□□□□ -0.31
SRRT-209ENST00000474896 GPR4P46093 362 aa13.14□□□□□ -0.31
SRRT-209ENST00000474896 OMPP47874 163 aa13.14□□□□□ -0.31
SRRT-209ENST00000474896 CTXN1P60606 82 aa13.14□□□□□ -0.31
SRRT-209ENST00000474896 BTG1P62324 171 aa13.14□□□□□ -0.31
SRRT-209ENST00000474896 ELF3P78545 371 aaPredicted RBP13.14□□□□□ -0.31
SRRT-209ENST00000474896 DEFA6Q01524 100 aa13.14□□□□□ -0.31
SRRT-209ENST00000474896 ZMYND11Q15326 602 aa13.14□□□□□ -0.31
SRRT-209ENST00000474896 MICAQ29983 383 aa13.14□□□□□ -0.31
SRRT-209ENST00000474896 PDLIM3Q53GG5 364 aaPredicted RBP13.14□□□□□ -0.31
SRRT-209ENST00000474896 TREML4Q6UXN2 200 aa13.14□□□□□ -0.31
SRRT-209ENST00000474896 Q6ZR03 302 aa13.14□□□□□ -0.31
SRRT-209ENST00000474896 TMPRSS11FQ6ZWK6 438 aa13.14□□□□□ -0.31
SRRT-209ENST00000474896 TMEM179BQ7Z7N9 219 aa13.14□□□□□ -0.31
SRRT-209ENST00000474896 AMIGO2Q86SJ2 522 aa13.14□□□□□ -0.31
SRRT-209ENST00000474896 LINC00471Q8N535 108 aa13.14□□□□□ -0.31
SRRT-209ENST00000474896 OR9Q2Q8NGE9 314 aa13.14□□□□□ -0.31
SRRT-209ENST00000474896 TAF15Q92804 592 aaKnown RBP eCLIP13.14□□□□□ -0.31
SRRT-209ENST00000474896 SLC25A28Q96A46 364 aa13.14□□□□□ -0.31
SRRT-209ENST00000474896 CMBLQ96DG6 245 aa13.14□□□□□ -0.31
SRRT-209ENST00000474896 PKP2Q99959 881 aa13.14□□□□□ -0.31
SRRT-209ENST00000474896 MS4A7Q9GZW8 240 aaPredicted RBP13.14□□□□□ -0.31
SRRT-209ENST00000474896 POFUT1Q9H488 388 aa13.14□□□□□ -0.31
SRRT-209ENST00000474896 HIF3AQ9Y2N7 669 aa13.14□□□□□ -0.31
SRRT-209ENST00000474896 POM121CA8CG34 1229 aa13.13□□□□□ -0.31
SRRT-209ENST00000474896 EFCAB9A8MZ26 197 aa13.13□□□□□ -0.31
SRRT-209ENST00000474896 ABHD16AO95870 558 aa13.13□□□□□ -0.31
SRRT-209ENST00000474896 SCG5P05408 212 aa13.13□□□□□ -0.31
SRRT-209ENST00000474896 RNASE1P07998 156 aaKnown RBP13.13□□□□□ -0.31
SRRT-209ENST00000474896 GSTM3P21266 225 aa13.13□□□□□ -0.31
SRRT-209ENST00000474896 IFNGR2P38484 337 aa13.13□□□□□ -0.31
SRRT-209ENST00000474896 IL13RA1P78552 427 aa13.13□□□□□ -0.31
SRRT-209ENST00000474896 PAX8Q06710 450 aa13.13□□□□□ -0.31
SRRT-209ENST00000474896 ENDOGQ14249 297 aaKnown RBP13.13□□□□□ -0.31
SRRT-209ENST00000474896 SLC9A3R2Q15599 337 aa13.13□□□□□ -0.31
SRRT-209ENST00000474896 ZNF770Q6IQ21 691 aaPredicted RBP13.13□□□□□ -0.31
SRRT-209ENST00000474896 PGBD2Q6P3X8 592 aa13.13□□□□□ -0.31
SRRT-209ENST00000474896 FOXL2NBQ6ZUU3 175 aa13.13□□□□□ -0.31
SRRT-209ENST00000474896 IGFN1Q86VF2 1251 aa13.13□□□□□ -0.31
SRRT-209ENST00000474896 OR10G2Q8NGC3 310 aa13.13□□□□□ -0.31
SRRT-209ENST00000474896 OR52E2Q8NGJ4 325 aa13.13□□□□□ -0.31
SRRT-209ENST00000474896 FNDC8Q8TC99 324 aa13.13□□□□□ -0.31
SRRT-209ENST00000474896 ITLN1Q8WWA0 313 aa13.13□□□□□ -0.31
SRRT-209ENST00000474896 NDRG4Q9ULP0 352 aaKnown RBP13.13□□□□□ -0.31
SRRT-209ENST00000474896 PPP1R3CQ9UQK1 317 aa13.13□□□□□ -0.31
SRRT-209ENST00000474896 SOX21Q9Y651 276 aaPredicted RBP13.13□□□□□ -0.31
SRRT-209ENST00000474896 IGHV3OR16-10A0A075B7F0 116 aa13.12□□□□□ -0.31
SRRT-209ENST00000474896 ARRDC5A6NEK1 342 aa13.12□□□□□ -0.31
SRRT-209ENST00000474896 C12orf71A8MTZ7 269 aa13.12□□□□□ -0.31
SRRT-209ENST00000474896 F5H0A9 414 aaPredicted RBP13.12□□□□□ -0.31
SRRT-209ENST00000474896 CDC42EP2O14613 210 aa13.12□□□□□ -0.31
SRRT-209ENST00000474896 KITLGP21583 273 aa13.12□□□□□ -0.31
SRRT-209ENST00000474896 MSR1P21757 451 aa13.12□□□□□ -0.31
SRRT-209ENST00000474896 FPR3P25089 353 aa13.12□□□□□ -0.31
SRRT-209ENST00000474896 CD80P33681 288 aa13.12□□□□□ -0.31
SRRT-209ENST00000474896 ESCO2Q56NI9 601 aa13.12□□□□□ -0.31
SRRT-209ENST00000474896 C1orf94Q6P1W5 598 aa13.12□□□□□ -0.31
SRRT-209ENST00000474896 SYT9Q86SS6 491 aa13.12□□□□□ -0.31
SRRT-209ENST00000474896 JAZF1Q86VZ6 243 aa13.12□□□□□ -0.31
SRRT-209ENST00000474896 HS3ST5Q8IZT8 346 aa13.12□□□□□ -0.31
SRRT-209ENST00000474896 LRRC75AQ8NAA5 344 aa13.12□□□□□ -0.31
SRRT-209ENST00000474896 AQP11Q8NBQ7 271 aa13.12□□□□□ -0.31
SRRT-209ENST00000474896 OR13C2Q8NGS9 318 aa13.12□□□□□ -0.31
SRRT-209ENST00000474896 GIPC3Q8TF64 312 aa13.12□□□□□ -0.31
SRRT-209ENST00000474896 CENPNQ96H22 339 aaPredicted RBP13.12□□□□□ -0.31
SRRT-209ENST00000474896 SIGLEC11Q96RL6 698 aa13.12□□□□□ -0.31
SRRT-209ENST00000474896 SEMA6AQ9H2E6 1030 aa13.12□□□□□ -0.31
SRRT-209ENST00000474896 TBCCD1Q9NVR7 557 aa13.12□□□□□ -0.31
SRRT-209ENST00000474896 PDP1Q9P0J1 537 aaPredicted RBP13.12□□□□□ -0.31
SRRT-209ENST00000474896 IL19Q9UHD0 177 aa13.12□□□□□ -0.31
SRRT-209ENST00000474896 STARD10Q9Y365 291 aa13.12□□□□□ -0.31
SRRT-209ENST00000474896 A8MXK9 166 aa13.11□□□□□ -0.31
SRRT-209ENST00000474896 H0YHG0 523 aa13.11□□□□□ -0.31
SRRT-209ENST00000474896 TMEM178BH3BS89 294 aa13.11□□□□□ -0.31
SRRT-209ENST00000474896 CLDN34H7C241 214 aa13.11□□□□□ -0.31
SRRT-209ENST00000474896 SURF4O15260 269 aa13.11□□□□□ -0.31
SRRT-209ENST00000474896 GPANK1O95872 356 aa13.11□□□□□ -0.31
SRRT-209ENST00000474896 WNT2P09544 360 aa13.11□□□□□ -0.31
SRRT-209ENST00000474896 TUBG1P23258 451 aa13.11□□□□□ -0.31
SRRT-209ENST00000474896 MDH2P40926 338 aaKnown RBP13.11□□□□□ -0.31
SRRT-209ENST00000474896 MTNR1AP48039 350 aa13.11□□□□□ -0.31
SRRT-209ENST00000474896 SLC9A3P48764 834 aa13.11□□□□□ -0.31
SRRT-209ENST00000474896 OAFQ86UD1 273 aa13.11□□□□□ -0.31
SRRT-209ENST00000474896 PQLC1Q8N2U9 271 aa13.11□□□□□ -0.31
SRRT-209ENST00000474896 NPEPL1Q8NDH3 523 aa13.11□□□□□ -0.31
SRRT-209ENST00000474896 OR51A7Q8NH64 312 aa13.11□□□□□ -0.31
SRRT-209ENST00000474896 OR5K1Q8NHB7 308 aa13.11□□□□□ -0.31
SRRT-209ENST00000474896 GNPDA2Q8TDQ7 276 aa13.11□□□□□ -0.31
SRRT-209ENST00000474896 HAVCR1Q96D42 359 aa13.11□□□□□ -0.31
SRRT-209ENST00000474896 NRBF2Q96F24 287 aa13.11□□□□□ -0.31
SRRT-209ENST00000474896 EMC7Q9NPA0 242 aa13.11□□□□□ -0.31
SRRT-209ENST00000474896 POLE4Q9NR33 117 aa13.11□□□□□ -0.31
SRRT-209ENST00000474896 TUBG2Q9NRH3 451 aa13.11□□□□□ -0.31
SRRT-209ENST00000474896 OR5V1Q9UGF6 321 aa13.11□□□□□ -0.31
SRRT-209ENST00000474896 TRAV27A0A087WT01 109 aa13.1□□□□□ -0.31
SRRT-209ENST00000474896 UNC119BA6NIH7 251 aa13.1□□□□□ -0.31
SRRT-209ENST00000474896 A6NIZ1 184 aa13.1□□□□□ -0.31
SRRT-209ENST00000474896 G3V2T6 193 aa13.1□□□□□ -0.31
SRRT-209ENST00000474896 H7C1C5 153 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms