RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 PDCD1LG2Q9BQ51 273 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 OCSTAMPQ9BR26 566 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 DCUN1D5Q9BTE7 237 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 TMED9Q9BVK6 235 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 TTTY10Q9BZA0 68 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 BARHL1Q9BZE3 327 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 HDHD2Q9H0R4 259 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 MMP27Q9H306 513 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 SLC17A5Q9NRA2 495 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 B3GNT2Q9NY97 397 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 NUFIP1Q9UHK0 495 aaKnown RBP5.79□□□□□ -1.48
ATG4A-207ENST00000474825 OR52A1Q9UKL2 312 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 FBXL3Q9UKT7 428 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 CLEC4AQ9UMR7 237 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 TIMM10BQ9Y5J6 103 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 FAM215AQ9Y5M1 114 aa5.79□□□□□ -1.48
ATG4A-207ENST00000474825 FASNP49327 2511 aaKnown RBP5.78□□□□□ -1.48
ATG4A-207ENST00000474825 A0A0G2JK05 382 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 A0A0U1RQV5 110 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 A0A1B0GTI1 187 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 PNMA8CA0A1B0GUJ8 204 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 IQCMA0A1B0GVH7 501 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 TMEM269A0A1B0GVZ9 245 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 B8ZZF3 427 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 LOC110117498-PIK3R3F6TDL0 507 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 DVL2O14641 736 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 ARL6IP5O75915 188 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 APOC1P02654 83 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 TTRP02766 147 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 ITGA5P08648 1049 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 UBCP0CG48 685 aaKnown RBP5.78□□□□□ -1.48
ATG4A-207ENST00000474825 EDN3P14138 238 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 ZNF32P17041 273 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 ACHEP22303 614 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 SDC2P34741 201 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 ETV6P41212 452 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 SERPINB10P48595 397 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 FOXG1P55316 489 aaPredicted RBP5.78□□□□□ -1.48
ATG4A-207ENST00000474825 ARF1P84077 181 aaKnown RBP5.78□□□□□ -1.48
ATG4A-207ENST00000474825 PSG4Q00888 419 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 MFGE8Q08431 387 aaPredicted RBP5.78□□□□□ -1.48
ATG4A-207ENST00000474825 KLRB1Q12918 225 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 LY6DQ14210 128 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 RAB35Q15286 201 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 ZNF829Q3KNS6 432 aaPredicted RBP5.78□□□□□ -1.48
ATG4A-207ENST00000474825 Q499Y3 187 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 CEP78Q5JTW2 689 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 C1orf185Q5T7R7 199 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 TMEM244Q5VVB8 128 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 OR7E24Q6IFN5 339 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 ZNF544Q6NX49 715 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 ANKRD16Q6P6B7 361 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 ZNF813Q6ZN06 617 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 ZNF704Q6ZNC4 412 aaPredicted RBP5.78□□□□□ -1.48
ATG4A-207ENST00000474825 Q6ZT83 130 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 KRT74Q7RTS7 529 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 P4HA3Q7Z4N8 544 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 CEACAM19Q7Z692 300 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 DOLPP1Q86YN1 238 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 CCDC36Q8IYA8 594 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 GABRG1Q8N1C3 465 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 CISD2Q8N5K1 135 aaKnown RBP5.78□□□□□ -1.48
ATG4A-207ENST00000474825 CCDC54Q8NEL0 328 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 C1orf162Q8NEQ5 155 aaPredicted RBP5.78□□□□□ -1.48
ATG4A-207ENST00000474825 OR5M9Q8NGP3 310 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 OR6Q1Q8NGQ2 317 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 OR1K1Q8NGR3 316 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 FGFBP3Q8TAT2 258 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 GPR148Q8TDV2 347 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 ZFAND2BQ8WV99 257 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 ASB5Q8WWX0 329 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 ZNF75AQ96N20 296 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 DERL3Q96Q80 235 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 ATF6BQ99941 703 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 SH3GL3Q99963 347 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 OR2H1Q9GZK4 316 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 COMMD4Q9H0A8 199 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 WNT5BQ9H1J7 359 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 SLC25A18Q9H1K4 315 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 EXOSC4Q9NPD3 245 aaKnown RBP5.78□□□□□ -1.48
ATG4A-207ENST00000474825 ZNF71Q9NQZ8 489 aaPredicted RBP5.78□□□□□ -1.48
ATG4A-207ENST00000474825 GALNT8Q9NY28 637 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 PLEKHB1Q9UF11 243 aaPredicted RBP5.78□□□□□ -1.48
ATG4A-207ENST00000474825 PRSS50Q9UI38 385 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 EMC9Q9Y3B6 208 aa5.78□□□□□ -1.48
ATG4A-207ENST00000474825 TLN1Q9Y490 2541 aaKnown RBP5.77□□□□□ -1.49
ATG4A-207ENST00000474825 BAHCC1Q9P281 2608 aa5.77□□□□□ -1.49
ATG4A-207ENST00000474825 SCO2A0A1W2PP80 73 aa5.77□□□□□ -1.49
ATG4A-207ENST00000474825 LOC390937A0A1W2PQ73 354 aa5.77□□□□□ -1.49
ATG4A-207ENST00000474825 J3QKU1 62 aa5.77□□□□□ -1.49
ATG4A-207ENST00000474825 ZNHIT1O43257 154 aa5.77□□□□□ -1.49
ATG4A-207ENST00000474825 SGCEO43556 437 aa5.77□□□□□ -1.49
ATG4A-207ENST00000474825 ICMTO60725 284 aa5.77□□□□□ -1.49
ATG4A-207ENST00000474825 RPP14O95059 124 aaKnown RBP5.77□□□□□ -1.49
ATG4A-207ENST00000474825 CDRT1O95170 752 aa5.77□□□□□ -1.49
ATG4A-207ENST00000474825 FARS2O95363 451 aaKnown RBP5.77□□□□□ -1.49
ATG4A-207ENST00000474825 ACSM4P0C7M7 580 aa5.77□□□□□ -1.49
ATG4A-207ENST00000474825 B4GALT1P15291 398 aa5.77□□□□□ -1.49
ATG4A-207ENST00000474825 IGFBP3P17936 291 aaPredicted RBP5.77□□□□□ -1.49
ATG4A-207ENST00000474825 SRMP19623 302 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms