RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 ATE1O95260 518 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 ABHD16AO95870 558 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 CRYAAP02489 173 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 ACSM4P0C7M7 580 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 FAM157BP0CG42 384 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 HTR5AP47898 357 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 MTNR1AP48039 350 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 GDI2P50395 445 aaKnown RBP6□□□□□ -1.45
LIMD1-204ENST00000474665 UCP2P55851 309 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 ROM1Q03395 351 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 PLP2Q04941 152 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 CDK5R2Q13319 367 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 DOC2BQ14184 412 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 EIF2B1Q14232 305 aaKnown RBP6□□□□□ -1.45
LIMD1-204ENST00000474665 ADIPOQQ15848 244 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 ALKBH6Q3KRA9 238 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 MEDAGQ5VYS4 303 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 C11orf71Q6IPW1 123 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 KRT80Q6KB66 452 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 DTX2Q86UW9 622 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 LRP11Q86VZ4 500 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 ALDH16A1Q8IZ83 802 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 DEPDC4Q8N2C3 294 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 ZNF611Q8N823 705 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 ZNF454Q8N9F8 522 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 ZNF555Q8NEP9 628 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 NUP37Q8NFH4 326 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 IL17RDQ8NFM7 739 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 OR51G2Q8NGK0 314 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 SGCDQ92629 289 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 LGALS12Q96DT0 336 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 SLAMF6Q96DU3 332 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 RNFT2Q96EX2 444 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 RADILQ96JH8 1075 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 CNN2Q99439 309 aaKnown RBP6□□□□□ -1.45
LIMD1-204ENST00000474665 COQ7Q99807 217 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 ATF6BQ99941 703 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 DHRS9Q9BPW9 319 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 HDHD2Q9H0R4 259 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 KCNN2Q9H2S1 579 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 OR51B6Q9H340 312 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 C1orf198Q9H425 327 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 CA10Q9NS85 328 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 MRPS18AQ9NVS2 196 aaKnown RBP6□□□□□ -1.45
LIMD1-204ENST00000474665 SLCO1C1Q9NYB5 712 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 CISD1Q9NZ45 108 aaKnown RBP6□□□□□ -1.45
LIMD1-204ENST00000474665 ZNF319Q9P2F9 582 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 MYEF2Q9P2K5 600 aaKnown RBP6□□□□□ -1.45
LIMD1-204ENST00000474665 ATPIF1Q9UII2 106 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 FBXL3Q9UKT7 428 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 EDARQ9UNE0 448 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 MYRFQ9Y2G1 1151 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 STARD10Q9Y365 291 aa6□□□□□ -1.45
LIMD1-204ENST00000474665 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6□□□□□ -1.459e-7■■■■■ 35.4
LIMD1-204ENST00000474665 F5H5K5 113 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 OVOL3O00110 214 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 PSMD9O00233 223 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 MPZL2O60487 215 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 SRSF10O75494 262 aaKnown RBP5.99□□□□□ -1.45
LIMD1-204ENST00000474665 CLPTM1O96005 669 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 IFNA2P01563 188 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 RAF1P04049 648 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 OR4A8P0C604 315 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 SLC2A1P11166 492 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 DBTP11182 482 aaKnown RBP5.99□□□□□ -1.45
LIMD1-204ENST00000474665 CD53P19397 219 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 CCNOP22674 350 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 MYF6P23409 242 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 TTKP33981 857 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 APLNRP35414 380 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 GLRXP35754 106 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 MPV17P39210 176 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 VHLP40337 213 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 PRKXP51817 358 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 IL5RAQ01344 420 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 GALK2Q01415 458 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 MVKQ03426 396 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 ZNF85Q03923 595 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 ECH1Q13011 328 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 SNTB2Q13425 540 aaKnown RBP5.99□□□□□ -1.45
LIMD1-204ENST00000474665 TMED1Q13445 227 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 IL18R1Q13478 541 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 SWI5Q1ZZU3 235 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 TBC1D28Q2M2D7 210 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 KRTAP24-1Q3LI83 254 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 SPATA46Q5T0L3 261 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 LCN1P1Q5VSP4 162 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 PAMR1Q6UXH9 720 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 LRRN1Q6UXK5 716 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 RHOUQ7L0Q8 258 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 THAP5Q7Z6K1 395 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 SLC35F2Q8IXU6 374 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 OR2AJ1Q8NGZ0 328 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 THEM6Q8WUY1 208 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 PPP1R14AQ96A00 147 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 MARS2Q96GW9 593 aaKnown RBP5.99□□□□□ -1.45
LIMD1-204ENST00000474665 C4orf45Q96LM5 186 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 TBX5Q99593 518 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 APOL4Q9BPW4 351 aa5.99□□□□□ -1.45
LIMD1-204ENST00000474665 CDADC1Q9BWV3 514 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms