RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 SIGLEC11Q96RL6 698 aa17.15■□□□□ 0.34
PDLIM4-206ENST00000474421 PITX2Q99697 317 aa17.15■□□□□ 0.34
PDLIM4-206ENST00000474421 GCM1Q9NP62 436 aa17.15■□□□□ 0.34
PDLIM4-206ENST00000474421 RPRD1BQ9NQG5 326 aaKnown RBP17.15■□□□□ 0.34
PDLIM4-206ENST00000474421 OPN4Q9UHM6 478 aa17.15■□□□□ 0.34
PDLIM4-206ENST00000474421 KCNG2Q9UJ96 466 aa17.15■□□□□ 0.34
PDLIM4-206ENST00000474421 ARL2BPQ9Y2Y0 163 aa17.15■□□□□ 0.34
PDLIM4-206ENST00000474421 IQCF6A8MYZ5 107 aa17.14■□□□□ 0.33
PDLIM4-206ENST00000474421 TMEM178BH3BS89 294 aa17.14■□□□□ 0.33
PDLIM4-206ENST00000474421 RGS9O75916 674 aaPredicted RBP17.14■□□□□ 0.33
PDLIM4-206ENST00000474421 DCTN3O75935 186 aa17.14■□□□□ 0.33
PDLIM4-206ENST00000474421 HLA-DQA2P01906 255 aa17.14■□□□□ 0.33
PDLIM4-206ENST00000474421 ZFP36P26651 326 aaKnown RBP17.14■□□□□ 0.33
PDLIM4-206ENST00000474421 MSX2P35548 267 aaPredicted RBP17.14■□□□□ 0.33
PDLIM4-206ENST00000474421 MMP16P51512 607 aa17.14■□□□□ 0.33
PDLIM4-206ENST00000474421 MNAT1P51948 309 aa17.14■□□□□ 0.33
PDLIM4-206ENST00000474421 ZMYND11Q15326 602 aa17.14■□□□□ 0.33
PDLIM4-206ENST00000474421 SLC18B1Q6NT16 456 aa17.14■□□□□ 0.33
PDLIM4-206ENST00000474421 ZNF620Q6ZNG0 422 aa17.14■□□□□ 0.33
PDLIM4-206ENST00000474421 COLCA1Q6ZS62 124 aa17.14■□□□□ 0.33
PDLIM4-206ENST00000474421 ZDHHC21Q8IVQ6 265 aa17.14■□□□□ 0.33
PDLIM4-206ENST00000474421 LINC00471Q8N535 108 aa17.14■□□□□ 0.33
PDLIM4-206ENST00000474421 OR52L1Q8NGH7 329 aa17.14■□□□□ 0.33
PDLIM4-206ENST00000474421 POP5Q969H6 163 aaKnown RBP17.14■□□□□ 0.33
PDLIM4-206ENST00000474421 MEGF10Q96KG7 1140 aa17.14■□□□□ 0.33
PDLIM4-206ENST00000474421 ATF6BQ99941 703 aa17.14■□□□□ 0.33
PDLIM4-206ENST00000474421 SLC30A2Q9BRI3 323 aa17.14■□□□□ 0.33
PDLIM4-206ENST00000474421 C1QTNF5Q9BXJ0 243 aa17.14■□□□□ 0.33
PDLIM4-206ENST00000474421 NBEAL1Q6ZS30 2694 aa17.14■□□□□ 0.33
PDLIM4-206ENST00000474421 SLC6A9P48067 706 aa17.13■□□□□ 0.33
PDLIM4-206ENST00000474421 MXRA7P84157 204 aa17.13■□□□□ 0.33
PDLIM4-206ENST00000474421 MALLQ13021 153 aa17.13■□□□□ 0.33
PDLIM4-206ENST00000474421 KRTAP27-1Q3LI81 207 aa17.13■□□□□ 0.33
PDLIM4-206ENST00000474421 ESCO2Q56NI9 601 aa17.13■□□□□ 0.33
PDLIM4-206ENST00000474421 DEFB107AQ8IZN7 70 aa17.13■□□□□ 0.33
PDLIM4-206ENST00000474421 OR10AD1Q8NGE0 317 aa17.13■□□□□ 0.33
PDLIM4-206ENST00000474421 SLC6A7Q99884 636 aa17.13■□□□□ 0.33
PDLIM4-206ENST00000474421 NTN4Q9HB63 628 aa17.13■□□□□ 0.33
PDLIM4-206ENST00000474421 TMEM100Q9NV29 134 aa17.13■□□□□ 0.33
PDLIM4-206ENST00000474421 ARL8BQ9NVJ2 186 aa17.13■□□□□ 0.33
PDLIM4-206ENST00000474421 CYB5R1Q9UHQ9 305 aa17.13■□□□□ 0.33
PDLIM4-206ENST00000474421 OR6C68A6NDL8 312 aa17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 LRRC30A6NM36 301 aa17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 A8MXK9 166 aa17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 F5H0A9 414 aaPredicted RBP17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 F5H5K5 113 aa17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 FSHBP01225 129 aa17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 ACSM4P0C7M7 580 aa17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 ZNF823P16415 610 aa17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 HMGA2P52926 109 aa17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 ZNF181Q2M3W8 571 aa17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 PGBD2Q6P3X8 592 aa17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 CFAP77Q6ZQR2 320 aa17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 LINC00346Q8IVM7 164 aa17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 C1orf87Q8N0U7 546 aa17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 SDR9C7Q8NEX9 313 aa17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 OR52E2Q8NGJ4 325 aa17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 GCDHQ92947 438 aaPredicted RBP17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 MRI1Q9BV20 369 aa17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 OR5V1Q9UGF6 321 aa17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 LRCH1Q9Y2L9 728 aa17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 CDH10Q9Y6N8 788 aa17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 DOCK11Q5JSL3 2073 aa17.12■□□□□ 0.33
PDLIM4-206ENST00000474421 FSTL3O95633 263 aa17.11■□□□□ 0.33
PDLIM4-206ENST00000474421 ZNF12P17014 697 aa17.11■□□□□ 0.33
PDLIM4-206ENST00000474421 GGT2P36268 569 aa17.11■□□□□ 0.33
PDLIM4-206ENST00000474421 COMPP49747 757 aaPredicted RBP17.11■□□□□ 0.33
PDLIM4-206ENST00000474421 TPTEP56180 551 aa17.11■□□□□ 0.33
PDLIM4-206ENST00000474421 GNGT1P63211 74 aa17.11■□□□□ 0.33
PDLIM4-206ENST00000474421 TRAP1Q12931 704 aaKnown RBP17.11■□□□□ 0.33
PDLIM4-206ENST00000474421 ZNF154Q13106 437 aa17.11■□□□□ 0.33
PDLIM4-206ENST00000474421 RSPO1Q2MKA7 263 aaPredicted RBP17.11■□□□□ 0.33
PDLIM4-206ENST00000474421 ARMCX4Q5H9R4 360 aa17.11■□□□□ 0.33
PDLIM4-206ENST00000474421 PIGWQ7Z7B1 504 aa17.11■□□□□ 0.33
PDLIM4-206ENST00000474421 DEFB108BQ8NET1 73 aa17.11■□□□□ 0.33
PDLIM4-206ENST00000474421 TRIM15Q9C019 465 aa17.11■□□□□ 0.33
PDLIM4-206ENST00000474421 MMP26Q9NRE1 261 aa17.11■□□□□ 0.33
PDLIM4-206ENST00000474421 AUP1Q9Y679 476 aa17.11■□□□□ 0.33
PDLIM4-206ENST00000474421 A0A1B0GWJ7 208 aa17.1■□□□□ 0.33
PDLIM4-206ENST00000474421 CEACAM18A8MTB9 384 aa17.1■□□□□ 0.33
PDLIM4-206ENST00000474421 LCATP04180 440 aa17.1■□□□□ 0.33
PDLIM4-206ENST00000474421 HNRNPA0Q13151 305 aaKnown RBP17.1■□□□□ 0.33
PDLIM4-206ENST00000474421 CLEC12AQ5QGZ9 265 aa17.1■□□□□ 0.33
PDLIM4-206ENST00000474421 SLC35F1Q5T1Q4 408 aa17.1■□□□□ 0.33
PDLIM4-206ENST00000474421 RBMS3Q6XE24 437 aaKnown RBP17.1■□□□□ 0.33
PDLIM4-206ENST00000474421 CELF2-AS1Q8N7Q2 184 aa17.1■□□□□ 0.33
PDLIM4-206ENST00000474421 BHLHE23Q8NDY6 225 aa17.1■□□□□ 0.33
PDLIM4-206ENST00000474421 OR2T4Q8NH00 348 aa17.1■□□□□ 0.33
PDLIM4-206ENST00000474421 SPTSSAQ969W0 71 aa17.1■□□□□ 0.33
PDLIM4-206ENST00000474421 ERGIC1Q969X5 290 aa17.1■□□□□ 0.33
PDLIM4-206ENST00000474421 FN3KQ9H479 309 aa17.1■□□□□ 0.33
PDLIM4-206ENST00000474421 ACTR3BQ9P1U1 418 aa17.1■□□□□ 0.33
PDLIM4-206ENST00000474421 MIOXQ9UGB7 285 aa17.1■□□□□ 0.33
PDLIM4-206ENST00000474421 NOP16Q9Y3C1 178 aaKnown RBP17.1■□□□□ 0.33
PDLIM4-206ENST00000474421 INSIG2Q9Y5U4 225 aa17.1■□□□□ 0.33
PDLIM4-206ENST00000474421 LYVE1Q9Y5Y7 322 aa17.1■□□□□ 0.33
PDLIM4-206ENST00000474421 TMEM89A2RUT3 159 aa17.09■□□□□ 0.33
PDLIM4-206ENST00000474421 TRAPPC2LH3BP13 241 aa17.09■□□□□ 0.33
PDLIM4-206ENST00000474421 TNFRSF11BO00300 401 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms