RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 ZNF813Q6ZN06 617 aa17.17■□□□□ 0.34
APP-215ENST00000474136 WDFY1Q8IWB7 410 aa17.17■□□□□ 0.34
APP-215ENST00000474136 ENTHD1Q8IYW4 607 aa17.17■□□□□ 0.34
APP-215ENST00000474136 SIGLECL1Q8N7X8 197 aa17.17■□□□□ 0.34
APP-215ENST00000474136 TCEANCQ8N8B7 351 aa17.17■□□□□ 0.34
APP-215ENST00000474136 OR6X1Q8NH79 312 aa17.17■□□□□ 0.34
APP-215ENST00000474136 DVL3Q92997 716 aaPredicted RBP17.17■□□□□ 0.34
APP-215ENST00000474136 RFKQ969G6 155 aa17.17■□□□□ 0.34
APP-215ENST00000474136 TSPAN32Q96QS1 320 aa17.17■□□□□ 0.34
APP-215ENST00000474136 EMC6Q9BV81 110 aa17.17■□□□□ 0.34
APP-215ENST00000474136 C7orf69Q9H7B7 122 aa17.17■□□□□ 0.34
APP-215ENST00000474136 CLN6Q9NWW5 311 aa17.17■□□□□ 0.34
APP-215ENST00000474136 H2AFY2Q9P0M6 372 aaPredicted RBP17.17■□□□□ 0.34
APP-215ENST00000474136 TAAR3PQ9P1P4 343 aa17.17■□□□□ 0.34
APP-215ENST00000474136 ADAM18Q9Y3Q7 739 aa17.17■□□□□ 0.34
APP-215ENST00000474136 RENP00797 406 aa17.16■□□□□ 0.34
APP-215ENST00000474136 IGHV2-5P01817 119 aa17.16■□□□□ 0.34
APP-215ENST00000474136 HLA-DOBP13765 273 aa17.16■□□□□ 0.34
APP-215ENST00000474136 FPR2P25090 351 aa17.16■□□□□ 0.34
APP-215ENST00000474136 ZFP36P26651 326 aaKnown RBP17.16■□□□□ 0.34
APP-215ENST00000474136 CXCR4P61073 352 aa17.16■□□□□ 0.34
APP-215ENST00000474136 KRR1Q13601 381 aaKnown RBP17.16■□□□□ 0.34
APP-215ENST00000474136 RAB39AQ14964 217 aa17.16■□□□□ 0.34
APP-215ENST00000474136 OCLNQ16625 522 aa17.16■□□□□ 0.34
APP-215ENST00000474136 SLC35F1Q5T1Q4 408 aa17.16■□□□□ 0.34
APP-215ENST00000474136 C20orf196Q8IYI0 205 aa17.16■□□□□ 0.34
APP-215ENST00000474136 OR52E2Q8NGJ4 325 aa17.16■□□□□ 0.34
APP-215ENST00000474136 ZNF519Q8TB69 540 aa17.16■□□□□ 0.34
APP-215ENST00000474136 FBLIM1Q8WUP2 373 aa17.16■□□□□ 0.34
APP-215ENST00000474136 TAF15Q92804 592 aaKnown RBP eCLIP17.16■□□□□ 0.34
APP-215ENST00000474136 RAB39BQ96DA2 213 aa17.16■□□□□ 0.34
APP-215ENST00000474136 Q96M85 177 aa17.16■□□□□ 0.34
APP-215ENST00000474136 YTHDF1Q9BYJ9 559 aaKnown RBP17.16■□□□□ 0.34
APP-215ENST00000474136 VWFP04275 2813 aa17.15■□□□□ 0.34
APP-215ENST00000474136 TEX13CA0A0J9YWL9 993 aa17.15■□□□□ 0.34
APP-215ENST00000474136 C17orf100A8MU93 164 aa17.15■□□□□ 0.34
APP-215ENST00000474136 PRR23D1E9PI22 279 aaPredicted RBP17.15■□□□□ 0.34
APP-215ENST00000474136 SERPINI2O75830 405 aa17.15■□□□□ 0.34
APP-215ENST00000474136 PATE4P0C8F1 98 aa17.15■□□□□ 0.34
APP-215ENST00000474136 PRR23D2P0DMB1 279 aaPredicted RBP17.15■□□□□ 0.34
APP-215ENST00000474136 HIST1H1CP16403 213 aaKnown RBP17.15■□□□□ 0.34
APP-215ENST00000474136 RAB1AP62820 205 aa17.15■□□□□ 0.34
APP-215ENST00000474136 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.15■□□□□ 0.34
APP-215ENST00000474136 TOP3AQ13472 1001 aaPredicted RBP17.15■□□□□ 0.34
APP-215ENST00000474136 ARMC4Q5T2S8 1044 aa17.15■□□□□ 0.34
APP-215ENST00000474136 NHLRC1Q6VVB1 395 aa17.15■□□□□ 0.34
APP-215ENST00000474136 GID4Q8IVV7 300 aa17.15■□□□□ 0.34
APP-215ENST00000474136 FGFBP3Q8TAT2 258 aa17.15■□□□□ 0.34
APP-215ENST00000474136 ASB10Q8WXI3 467 aa17.15■□□□□ 0.34
APP-215ENST00000474136 SLC25A44Q96H78 314 aaPredicted RBP17.15■□□□□ 0.34
APP-215ENST00000474136 HINT3Q9NQE9 182 aaKnown RBP17.15■□□□□ 0.34
APP-215ENST00000474136 WIPI2Q9Y4P8 454 aa17.15■□□□□ 0.34
APP-215ENST00000474136 CACNG2Q9Y698 323 aa17.15■□□□□ 0.34
APP-215ENST00000474136 ARHGAP32A7KAX9 2087 aa17.15■□□□□ 0.34
APP-215ENST00000474136 PRKYO43930 277 aa17.14■□□□□ 0.33
APP-215ENST00000474136 RAB36O95755 333 aa17.14■□□□□ 0.33
APP-215ENST00000474136 IGHG1P01857 330 aa17.14■□□□□ 0.33
APP-215ENST00000474136 CENPAP49450 140 aa17.14■□□□□ 0.33
APP-215ENST00000474136 BIDP55957 195 aa17.14■□□□□ 0.33
APP-215ENST00000474136 CD47Q08722 323 aa17.14■□□□□ 0.33
APP-215ENST00000474136 CDK5R2Q13319 367 aa17.14■□□□□ 0.33
APP-215ENST00000474136 TMED1Q13445 227 aa17.14■□□□□ 0.33
APP-215ENST00000474136 ZNF362Q5T0B9 420 aaPredicted RBP17.14■□□□□ 0.33
APP-215ENST00000474136 NXNL2Q5VZ03 156 aa17.14■□□□□ 0.33
APP-215ENST00000474136 ZNF584Q8IVC4 421 aa17.14■□□□□ 0.33
APP-215ENST00000474136 OR4K13Q8NH42 304 aa17.14■□□□□ 0.33
APP-215ENST00000474136 GTF3AQ92664 365 aaKnown RBP17.14■□□□□ 0.33
APP-215ENST00000474136 TXNDC15Q96J42 360 aa17.14■□□□□ 0.33
APP-215ENST00000474136 C1orf147Q96MC9 270 aaPredicted RBP17.14■□□□□ 0.33
APP-215ENST00000474136 NR1H4Q96RI1 486 aaPredicted RBP17.14■□□□□ 0.33
APP-215ENST00000474136 IL4I1Q96RQ9 567 aa17.14■□□□□ 0.33
APP-215ENST00000474136 ALG12Q9BV10 488 aa17.14■□□□□ 0.33
APP-215ENST00000474136 PRSS37A4D1T9 235 aa17.13■□□□□ 0.33
APP-215ENST00000474136 DNAJC9-AS1A6NH13 148 aa17.13■□□□□ 0.33
APP-215ENST00000474136 FAM157BP0CG42 384 aa17.13■□□□□ 0.33
APP-215ENST00000474136 GABRB1P18505 474 aa17.13■□□□□ 0.33
APP-215ENST00000474136 PRTN3P24158 256 aa17.13■□□□□ 0.33
APP-215ENST00000474136 CRYBB2P43320 205 aa17.13■□□□□ 0.33
APP-215ENST00000474136 RAD52P43351 418 aa17.13■□□□□ 0.33
APP-215ENST00000474136 SLC25A1P53007 311 aa17.13■□□□□ 0.33
APP-215ENST00000474136 RBM48Q5RL73 367 aaKnown RBP17.13■□□□□ 0.33
APP-215ENST00000474136 C6orf141Q5SZD1 244 aa17.13■□□□□ 0.33
APP-215ENST00000474136 RGS7BPQ6MZT1 257 aaPredicted RBP17.13■□□□□ 0.33
APP-215ENST00000474136 DNM1P34Q6PK57 102 aa17.13■□□□□ 0.33
APP-215ENST00000474136 ZNF627Q7L945 461 aa17.13■□□□□ 0.33
APP-215ENST00000474136 SLC37A3Q8NCC5 494 aa17.13■□□□□ 0.33
APP-215ENST00000474136 NPEPL1Q8NDH3 523 aa17.13■□□□□ 0.33
APP-215ENST00000474136 HDAC2Q92769 488 aaKnown RBP17.13■□□□□ 0.33
APP-215ENST00000474136 ZNF566Q969W8 418 aa17.13■□□□□ 0.33
APP-215ENST00000474136 RASD2Q96D21 266 aa17.13■□□□□ 0.33
APP-215ENST00000474136 LRR1Q96L50 414 aa17.13■□□□□ 0.33
APP-215ENST00000474136 RBP7Q96R05 134 aa17.13■□□□□ 0.33
APP-215ENST00000474136 OR51B6Q9H340 312 aa17.13■□□□□ 0.33
APP-215ENST00000474136 MED29Q9NX70 200 aa17.13■□□□□ 0.33
APP-215ENST00000474136 SCN3BQ9NY72 215 aa17.13■□□□□ 0.33
APP-215ENST00000474136 BLOC1S6Q9UL45 172 aa17.13■□□□□ 0.33
APP-215ENST00000474136 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.13■□□□□ 0.33
APP-215ENST00000474136 IGHV1-69-2A0A0G2JMI3 117 aa17.12■□□□□ 0.33
APP-215ENST00000474136 PRODHO43272 600 aa17.12■□□□□ 0.33
APP-215ENST00000474136 CRABP1P29762 137 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms