RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 MYO1DO94832 1006 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 DEXIO95424 95 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 TTC4O95801 387 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 S100A6P06703 90 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 FAM228BP0C875 321 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 ICAM2P13598 275 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 CFL1P23528 166 aaKnown RBP3.1□□□□□ -1.91
BRCA1-212ENST00000473961 RCVRNP35243 200 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 NAMPTP43490 491 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 NPBWR2P48146 333 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 AQP4P55087 323 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 IFITM2Q01629 132 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 PAX5Q02548 391 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 ACVR1Q04771 509 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 RAD51Q06609 339 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 PDIA2Q13087 525 aaKnown RBP3.1□□□□□ -1.91
BRCA1-212ENST00000473961 PRPSAP1Q14558 356 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 ALKBH6Q3KRA9 238 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 ZBED5Q49AG3 693 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 CCDC58Q4VC31 144 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 CAVIN4Q5BKX8 364 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 COA6Q5JTJ3 125 aaKnown RBP3.1□□□□□ -1.91
BRCA1-212ENST00000473961 PPM1LQ5SGD2 360 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 CASC10Q5T4H9 136 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 OGFRL1Q5TC84 451 aaPredicted RBP3.1□□□□□ -1.91
BRCA1-212ENST00000473961 PLCXD3Q63HM9 321 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 ZFP1Q6P2D0 407 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 ZNF836Q6ZNA1 936 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 NT5DC3Q86UY8 548 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 C6orf223Q8N319 242 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 CCDC54Q8NEL0 328 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 OR2L5Q8NG80 312 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 OR10G9Q8NGN4 311 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 GRPEL2Q8TAA5 225 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 NEIL3Q8TAT5 605 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 SLC7A13Q8TCU3 470 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 C7orf33Q8WU49 177 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 SDR42E1Q8WUS8 393 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 TAMM41Q96BW9 452 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 C16orf74Q96GX8 76 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 FCRL1Q96LA6 429 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 CYTH2Q99418 400 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 SLC29A1Q99808 456 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 SRMSQ9H3Y6 488 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 ELOVL6Q9H5J4 265 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 ARMC7Q9H6L4 198 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 C8orf4Q9NR00 106 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 HRASLS2Q9NWW9 162 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 CLN8Q9UBY8 286 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 HMGXB4Q9UGU5 601 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 LSM7Q9UK45 103 aaKnown RBP3.1□□□□□ -1.91
BRCA1-212ENST00000473961 SNX24Q9Y343 169 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 MYH4Q9Y623 1939 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 TMEM131LA2VDJ0 1609 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 MYH11P35749 1972 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 ZNF532Q9HCE3 1301 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 NID2Q14112 1375 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 DDX60Q8IY21 1712 aaKnown RBP3.1□□□□□ -1.91
BRCA1-212ENST00000473961 CPS1P31327 1500 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 MYH6P13533 1939 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 NRKQ7Z2Y5 1582 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 A0A087WXM4 84 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 TRAV25A0A0B4J276 109 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 A8MUA0 341 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 PSMD12O00232 456 aaPredicted RBP3.09□□□□□ -1.91
BRCA1-212ENST00000473961 YKT6O15498 198 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 CHST1O43916 411 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 CLPXO76031 633 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 PLEKHA8P1O95397 391 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 TIMP1P01033 207 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 TFPTP0C1Z6 253 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 PRKACAP17612 351 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 GSTM3P21266 225 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 AK4P27144 223 aaPredicted RBP3.09□□□□□ -1.91
BRCA1-212ENST00000473961 CASP1P29466 404 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 CBX5P45973 191 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 MAP3K7CLP57077 242 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 S100A12P80511 92 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 ZNF92Q03936 586 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 ZNF763Q0D2J5 394 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 SELENBP1Q13228 472 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 SLC39A6Q13433 755 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 CLINT1Q14677 625 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 ZNF846Q147U1 533 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 TRIP13Q15645 432 aaPredicted RBP3.09□□□□□ -1.91
BRCA1-212ENST00000473961 MRPL23Q16540 153 aaKnown RBP3.09□□□□□ -1.91
BRCA1-212ENST00000473961 PGGHGQ32M88 737 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 HSDL1Q3SXM5 330 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 PIP5KL1Q5T9C9 394 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 LPCAT4Q643R3 524 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 ANKRD26P1Q6NSI1 321 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 C1orf94Q6P1W5 598 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 CNIH2Q6PI25 160 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 CMC1Q7Z7K0 106 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 PUSL1Q8N0Z8 303 aaKnown RBP3.09□□□□□ -1.91
BRCA1-212ENST00000473961 PNKDQ8N490 385 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 JAGN1Q8N5M9 183 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 TTC29Q8NA56 475 aaPredicted RBP3.09□□□□□ -1.91
BRCA1-212ENST00000473961 OR52K1Q8NGK4 314 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 OR1S2Q8NGQ3 325 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms