RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 VANGL2Q9ULK5 521 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 NEU3Q9UQ49 428 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 CACNG2Q9Y698 323 aa4.07□□□□□ -1.76
SEC22A-204ENST00000473494 XKRYO14609 159 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 AKR7A2O43488 359 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 SUPT3HO75486 399 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 H6PDO95479 791 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 BGLAPP02818 100 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 ANXA5P08758 320 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 ZDHHC11BP0C7U3 371 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 PNMA6AP0CW24 399 aaPredicted RBP4.06□□□□□ -1.76
SEC22A-204ENST00000473494 PSG2P11465 335 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 ZNF30P17039 623 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 PRKACBP22694 351 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 LHX2P50458 406 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 NCBP2P52298 156 aaKnown RBP eCLIP4.06□□□□□ -1.76
SEC22A-204ENST00000473494 CLDN8P56748 225 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 RPS21P63220 83 aaKnown RBP4.06□□□□□ -1.76
SEC22A-204ENST00000473494 ZBED5Q49AG3 693 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 LIN9Q5TKA1 542 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 ANKRD26P1Q6NSI1 321 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 CENPQQ7L2Z9 268 aaPredicted RBP4.06□□□□□ -1.76
SEC22A-204ENST00000473494 KRTAP11-1Q8IUC1 163 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 MKXQ8IYA7 352 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 CCDC54Q8NEL0 328 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 TSEN15Q8WW01 171 aaKnown RBP4.06□□□□□ -1.76
SEC22A-204ENST00000473494 ASB9Q96DX5 294 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 PANX1Q96RD7 426 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 P2RX4Q99571 388 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 BPIFA3Q9BQP9 254 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 C20orf24Q9BUV8 137 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 IQCGQ9H095 443 aaKnown RBP4.06□□□□□ -1.76
SEC22A-204ENST00000473494 SLCO1B3Q9NPD5 702 aa4.06□□□□□ -1.76
SEC22A-204ENST00000473494 STOX2Q9P2F5 926 aaPredicted RBP4.06□□□□□ -1.76
SEC22A-204ENST00000473494 TRBV9A0A0B4J1U6 114 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 LRRIQ3A6PVS8 624 aaPredicted RBP4.05□□□□□ -1.76
SEC22A-204ENST00000473494 FAM166BA8MTA8 275 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 SIRPB1O00241 398 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 UTS2O95399 124 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 CSTAP01040 98 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 IGLV2-23P01705 113 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 CRYGCP07315 174 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 ACTA2P62736 377 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 ACTG2P63267 376 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 ACTC1P68032 377 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 ACTA1P68133 377 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 ADARB1P78563 741 aaKnown RBP4.05□□□□□ -1.76
SEC22A-204ENST00000473494 SMARCB1Q12824 385 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 CHRNA6Q15825 494 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 CST9Q5W186 159 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 LINC00173Q6ZV60 143 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 SLC16A14Q7RTX9 510 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 C6orf120Q7Z4R8 191 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 KATNAL2Q8IYT4 538 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 MDS2Q8NDY4 140 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 OR4A4PQ8NGN8 299 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 ACTRT1Q8TDG2 376 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 GEMIN6Q8WXD5 167 aaKnown RBP4.05□□□□□ -1.76
SEC22A-204ENST00000473494 DUS3LQ96G46 650 aaKnown RBP4.05□□□□□ -1.76
SEC22A-204ENST00000473494 ZNF799Q96GE5 643 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 TSSK3Q96PN8 268 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 AUNIPQ9H7T9 357 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 GEMIN7Q9H840 131 aaKnown RBP4.05□□□□□ -1.76
SEC22A-204ENST00000473494 AGPAT3Q9NRZ7 376 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 DEC1Q9P2X7 70 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 PEF1Q9UBV8 284 aaKnown RBP4.05□□□□□ -1.76
SEC22A-204ENST00000473494 PCYOX1Q9UHG3 505 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 GMEB1Q9Y692 573 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 TRPM7Q96QT4 1865 aa4.05□□□□□ -1.76
SEC22A-204ENST00000473494 MYO10Q9HD67 2058 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 TRBV6-6A0A0A6YYG2 114 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 GLYATL1P3A0A0U1RQE8 302 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 SUPT3HB4E1H0 165 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 HSBP1L1C9JCN9 74 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 F6UB75 175 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 YKT6O15498 198 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 YEATS4O95619 227 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 CCDC172P0C7W6 258 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 CNR1P21554 472 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 U2AF2P26368 475 aaKnown RBP eCLIP4.04□□□□□ -1.76
SEC22A-204ENST00000473494 AK4P27144 223 aaPredicted RBP4.04□□□□□ -1.76
SEC22A-204ENST00000473494 HRH1P35367 487 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 SLC1A1P43005 524 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 RPS10P46783 165 aaKnown RBP4.04□□□□□ -1.76
SEC22A-204ENST00000473494 NMUP48645 174 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 RGS8P57771 180 aaPredicted RBP4.04□□□□□ -1.76
SEC22A-204ENST00000473494 MRPL23Q16540 153 aaKnown RBP4.04□□□□□ -1.76
SEC22A-204ENST00000473494 TTLL9Q3SXZ7 439 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 PIGGQ5H8A4 983 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 C22orf42Q6IC83 251 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 TMEM179Q6ZVK1 233 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 SLC7A13Q8TCU3 470 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 NRGNQ92686 78 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 DNAJC19Q96DA6 116 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 FAM210AQ96ND0 272 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 RPF2Q9H7B2 306 aaKnown RBP4.04□□□□□ -1.76
SEC22A-204ENST00000473494 CYP3A43Q9HB55 503 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 TMEM165Q9HC07 324 aa4.04□□□□□ -1.76
SEC22A-204ENST00000473494 V9GYY5 206 aaPredicted RBP4.04□□□□□ -1.76
SEC22A-204ENST00000473494 DOCK9Q9BZ29 2069 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms