RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 ZNF799Q96GE5 643 aa17.2■□□□□ 0.34
SF1-213ENST00000472725 MYCBPQ99417 103 aaPredicted RBP17.2■□□□□ 0.34
SF1-213ENST00000472725 C1QTNF5Q9BXJ0 243 aa17.2■□□□□ 0.34
SF1-213ENST00000472725 MRPS18AQ9NVS2 196 aaKnown RBP17.2■□□□□ 0.34
SF1-213ENST00000472725 BEX4Q9NWD9 120 aaPredicted RBP17.2■□□□□ 0.34
SF1-213ENST00000472725 HRNRQ86YZ3 2850 aaPredicted RBP17.2■□□□□ 0.34
SF1-213ENST00000472725 APCP25054 2843 aa17.19■□□□□ 0.34
SF1-213ENST00000472725 GPRIN2O60269 458 aa17.19■□□□□ 0.34
SF1-213ENST00000472725 SOD3P08294 240 aa17.19■□□□□ 0.34
SF1-213ENST00000472725 DBHP09172 617 aa17.19■□□□□ 0.34
SF1-213ENST00000472725 H2BFMP0C1H6 154 aa17.19■□□□□ 0.34
SF1-213ENST00000472725 HSD11B1P28845 292 aa17.19■□□□□ 0.34
SF1-213ENST00000472725 PPP1CBP62140 327 aa17.19■□□□□ 0.34
SF1-213ENST00000472725 ACTC1P68032 377 aa17.19■□□□□ 0.34
SF1-213ENST00000472725 ACTA1P68133 377 aa17.19■□□□□ 0.34
SF1-213ENST00000472725 EGR3Q06889 387 aa17.19■□□□□ 0.34
SF1-213ENST00000472725 SWI5Q1ZZU3 235 aa17.19■□□□□ 0.34
SF1-213ENST00000472725 MBNL2Q5VZF2 373 aaKnown RBP17.19■□□□□ 0.34
SF1-213ENST00000472725 EGFL6Q8IUX8 553 aa17.19■□□□□ 0.34
SF1-213ENST00000472725 APH1BQ8WW43 257 aa17.19■□□□□ 0.34
SF1-213ENST00000472725 MROQ9BYG7 248 aa17.19■□□□□ 0.34
SF1-213ENST00000472725 LIME1Q9H400 295 aa17.19■□□□□ 0.34
SF1-213ENST00000472725 PLK3Q9H4B4 646 aa17.19■□□□□ 0.34
SF1-213ENST00000472725 GPR160Q9UJ42 338 aa17.19■□□□□ 0.34
SF1-213ENST00000472725 LAMP3Q9UQV4 416 aa17.19■□□□□ 0.34
SF1-213ENST00000472725 EXOGQ9Y2C4 368 aaKnown RBP17.19■□□□□ 0.34
SF1-213ENST00000472725 IGLV3-9A0A075B6K5 115 aa17.18■□□□□ 0.34
SF1-213ENST00000472725 IRGMA1A4Y4 181 aa17.18■□□□□ 0.34
SF1-213ENST00000472725 OVOL3O00110 214 aa17.18■□□□□ 0.34
SF1-213ENST00000472725 WBP4O75554 376 aaKnown RBP17.18■□□□□ 0.34
SF1-213ENST00000472725 CLIC3O95833 236 aa17.18■□□□□ 0.34
SF1-213ENST00000472725 NGFP01138 241 aa17.18■□□□□ 0.34
SF1-213ENST00000472725 CD8AP01732 235 aa17.18■□□□□ 0.34
SF1-213ENST00000472725 DBTP11182 482 aaKnown RBP17.18■□□□□ 0.34
SF1-213ENST00000472725 PAX1P15863 534 aa17.18■□□□□ 0.34
SF1-213ENST00000472725 SNRPD2P62316 118 aaKnown RBP17.18■□□□□ 0.34
SF1-213ENST00000472725 RAB40BQ12829 278 aa17.18■□□□□ 0.34
SF1-213ENST00000472725 KLHL22Q53GT1 634 aa17.18■□□□□ 0.34
SF1-213ENST00000472725 C11orf71Q6IPW1 123 aa17.18■□□□□ 0.34
SF1-213ENST00000472725 RFPL4BQ6ZWI9 263 aa17.18■□□□□ 0.34
SF1-213ENST00000472725 THAP5Q7Z6K1 395 aa17.18■□□□□ 0.34
SF1-213ENST00000472725 KRT77Q7Z794 578 aa17.18■□□□□ 0.34
SF1-213ENST00000472725 ZNF679Q8IYX0 411 aa17.18■□□□□ 0.34
SF1-213ENST00000472725 SYNPRQ8TBG9 265 aa17.18■□□□□ 0.34
SF1-213ENST00000472725 FBLIM1Q8WUP2 373 aa17.18■□□□□ 0.34
SF1-213ENST00000472725 NRGNQ92686 78 aa17.18■□□□□ 0.34
SF1-213ENST00000472725 RNFT2Q96EX2 444 aa17.18■□□□□ 0.34
SF1-213ENST00000472725 MARS2Q96GW9 593 aaKnown RBP17.18■□□□□ 0.34
SF1-213ENST00000472725 OR8B4Q96RC9 309 aa17.18■□□□□ 0.34
SF1-213ENST00000472725 AMELYQ99218 206 aa17.18■□□□□ 0.34
SF1-213ENST00000472725 SLCO1C1Q9NYB5 712 aa17.18■□□□□ 0.34
SF1-213ENST00000472725 PMF1-BGLAPU3KQ54 211 aa17.18■□□□□ 0.34
SF1-213ENST00000472725 ACOD1A6NK06 481 aa17.17■□□□□ 0.34
SF1-213ENST00000472725 FADS2O95864 444 aaKnown RBP17.17■□□□□ 0.34
SF1-213ENST00000472725 GCH1P30793 250 aa17.17■□□□□ 0.34
SF1-213ENST00000472725 KLF3P57682 345 aaPredicted RBP17.17■□□□□ 0.34
SF1-213ENST00000472725 CXCR4P61073 352 aa17.17■□□□□ 0.34
SF1-213ENST00000472725 ZNF91Q05481 1191 aa17.17■□□□□ 0.34
SF1-213ENST00000472725 MST1LQ2TV78 715 aa17.17■□□□□ 0.34
SF1-213ENST00000472725 ZNF322Q6U7Q0 402 aaPredicted RBP17.17■□□□□ 0.34
SF1-213ENST00000472725 IZUMO2Q6UXV1 221 aa17.17■□□□□ 0.34
SF1-213ENST00000472725 SLC25A40Q8TBP6 338 aa17.17■□□□□ 0.34
SF1-213ENST00000472725 CGGBP1Q9UFW8 167 aaPredicted RBP17.17■□□□□ 0.34
SF1-213ENST00000472725 PLEKHA6Q9Y2H5 1048 aa17.17■□□□□ 0.34
SF1-213ENST00000472725 KLHDC2Q9Y2U9 406 aa17.17■□□□□ 0.34
SF1-213ENST00000472725 ABCA12Q86UK0 2595 aa17.17■□□□□ 0.34
SF1-213ENST00000472725 NBPF19A0A087WUL8 3843 aa17.16■□□□□ 0.34
SF1-213ENST00000472725 J3QRE1 110 aa17.16■□□□□ 0.34
SF1-213ENST00000472725 IGHV3-13P01766 116 aa17.16■□□□□ 0.34
SF1-213ENST00000472725 LCATP04180 440 aa17.16■□□□□ 0.34
SF1-213ENST00000472725 SLC6A9P48067 706 aa17.16■□□□□ 0.34
SF1-213ENST00000472725 HCCSP53701 268 aa17.16■□□□□ 0.34
SF1-213ENST00000472725 CSNK2BP67870 215 aa17.16■□□□□ 0.34
SF1-213ENST00000472725 MALLQ13021 153 aa17.16■□□□□ 0.34
SF1-213ENST00000472725 FBXW12Q6X9E4 464 aa17.16■□□□□ 0.34
SF1-213ENST00000472725 LRRC75A-AS1Q8N1F1 130 aa17.16■□□□□ 0.34
SF1-213ENST00000472725 ACBD7Q8N6N7 88 aa17.16■□□□□ 0.34
SF1-213ENST00000472725 ZNF283Q8N7M2 679 aa17.16■□□□□ 0.34
SF1-213ENST00000472725 OR52H1Q8NGJ2 320 aa17.16■□□□□ 0.34
SF1-213ENST00000472725 KLF14Q8TD94 323 aaPredicted RBP17.16■□□□□ 0.34
SF1-213ENST00000472725 ITFG2Q969R8 447 aa17.16■□□□□ 0.34
SF1-213ENST00000472725 MRPL48Q96GC5 212 aaKnown RBP17.16■□□□□ 0.34
SF1-213ENST00000472725 DOK1Q99704 481 aa17.16■□□□□ 0.34
SF1-213ENST00000472725 ANKRD60Q9BZ19 345 aa17.16■□□□□ 0.34
SF1-213ENST00000472725 MRPL37Q9BZE1 423 aaKnown RBP17.16■□□□□ 0.34
SF1-213ENST00000472725 OR51B6Q9H340 312 aa17.16■□□□□ 0.34
SF1-213ENST00000472725 OPA3Q9H6K4 179 aa17.16■□□□□ 0.34
SF1-213ENST00000472725 INPP5EQ9NRR6 644 aa17.16■□□□□ 0.34
SF1-213ENST00000472725 ZNF701Q9NV72 531 aaPredicted RBP17.16■□□□□ 0.34
SF1-213ENST00000472725 COPS3Q9UNS2 423 aa17.16■□□□□ 0.34
SF1-213ENST00000472725 STARD10Q9Y365 291 aa17.16■□□□□ 0.34
SF1-213ENST00000472725 SPG11Q96JI7 2443 aa17.15■□□□□ 0.34
SF1-213ENST00000472725 TMEM129A0AVI4 362 aa17.15■□□□□ 0.34
SF1-213ENST00000472725 H7C417 338 aa17.15■□□□□ 0.34
SF1-213ENST00000472725 SULT1C4O75897 302 aa17.15■□□□□ 0.34
SF1-213ENST00000472725 GNAO1P09471 354 aa17.15■□□□□ 0.34
SF1-213ENST00000472725 RAC2P15153 192 aa17.15■□□□□ 0.34
SF1-213ENST00000472725 LIPAP38571 399 aa17.15■□□□□ 0.34
SF1-213ENST00000472725 CX3CR1P49238 355 aa17.15■□□□□ 0.34
SF1-213ENST00000472725 PPOXP50336 477 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms