RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 SEMG2Q02383 582 aa2.85□□□□□ -1.95
CLK1-209ENST00000472679 SRSF5Q13243 272 aaKnown RBP2.85□□□□□ -1.95
CLK1-209ENST00000472679 ZNF266Q14584 549 aa2.85□□□□□ -1.95
CLK1-209ENST00000472679 KIR2DS1Q14954 304 aa2.85□□□□□ -1.95
CLK1-209ENST00000472679 AP1ARQ63HQ0 302 aa2.85□□□□□ -1.95
CLK1-209ENST00000472679 LRRC66Q68CR7 880 aa2.85□□□□□ -1.95
CLK1-209ENST00000472679 UNQ9165/PRO28630Q6UXU0 137 aa2.85□□□□□ -1.95
CLK1-209ENST00000472679 MRPL55Q7Z7F7 128 aaKnown RBP2.85□□□□□ -1.95
CLK1-209ENST00000472679 NKAIN4Q8IVV8 208 aa2.85□□□□□ -1.95
CLK1-209ENST00000472679 TMEM256Q8N2U0 113 aa2.85□□□□□ -1.95
CLK1-209ENST00000472679 OR11H7Q8NGC8 314 aa2.85□□□□□ -1.95
CLK1-209ENST00000472679 LYPD6BQ8NI32 183 aa2.85□□□□□ -1.95
CLK1-209ENST00000472679 APH1BQ8WW43 257 aa2.85□□□□□ -1.95
CLK1-209ENST00000472679 RBBP8Q99708 897 aa2.85□□□□□ -1.95
CLK1-209ENST00000472679 SULT4A1Q9BR01 284 aa2.85□□□□□ -1.95
CLK1-209ENST00000472679 GGTLC1Q9BX51 225 aa2.85□□□□□ -1.95
CLK1-209ENST00000472679 ZNF717Q9BY31 904 aaPredicted RBP2.85□□□□□ -1.95
CLK1-209ENST00000472679 MTCH1Q9NZJ7 389 aa2.85□□□□□ -1.95
CLK1-209ENST00000472679 H7C1H1 209 aa2.84□□□□□ -1.95
CLK1-209ENST00000472679 RAD51CO43502 376 aa2.84□□□□□ -1.95
CLK1-209ENST00000472679 AQP8O94778 261 aa2.84□□□□□ -1.95
CLK1-209ENST00000472679 SEMA3DO95025 777 aa2.84□□□□□ -1.95
CLK1-209ENST00000472679 CD37P11049 281 aa2.84□□□□□ -1.95
CLK1-209ENST00000472679 OR1E1P30953 314 aa2.84□□□□□ -1.95
CLK1-209ENST00000472679 GFERP55789 205 aa2.84□□□□□ -1.95
CLK1-209ENST00000472679 RPL23P62829 140 aaKnown RBP2.84□□□□□ -1.95
CLK1-209ENST00000472679 DGCR6Q14129 220 aa2.84□□□□□ -1.95
CLK1-209ENST00000472679 TRAM2Q15035 370 aa2.84□□□□□ -1.95
CLK1-209ENST00000472679 PSMD5Q16401 504 aa2.84□□□□□ -1.95
CLK1-209ENST00000472679 MBOAT2Q6ZWT7 520 aa2.84□□□□□ -1.95
CLK1-209ENST00000472679 CBLN2Q8IUK8 224 aa2.84□□□□□ -1.95
CLK1-209ENST00000472679 OR13G1Q8NGZ3 307 aa2.84□□□□□ -1.95
CLK1-209ENST00000472679 RTN4IP1Q8WWV3 396 aaPredicted RBP2.84□□□□□ -1.95
CLK1-209ENST00000472679 DCPSQ96C86 337 aaKnown RBP2.84□□□□□ -1.95
CLK1-209ENST00000472679 TBL1YQ9BQ87 522 aa2.84□□□□□ -1.95
CLK1-209ENST00000472679 CCDC77Q9BR77 488 aa2.84□□□□□ -1.95
CLK1-209ENST00000472679 C20orf24Q9BUV8 137 aa2.84□□□□□ -1.95
CLK1-209ENST00000472679 SAMD10Q9BYL1 202 aa2.84□□□□□ -1.95
CLK1-209ENST00000472679 C1orf198Q9H425 327 aa2.84□□□□□ -1.95
CLK1-209ENST00000472679 TMEM165Q9HC07 324 aa2.84□□□□□ -1.95
CLK1-209ENST00000472679 PTTG3PQ9NZH4 202 aa2.84□□□□□ -1.95
CLK1-209ENST00000472679 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.83□□□□□ -1.96
CLK1-209ENST00000472679 A0A0J9YXV3 536 aa2.83□□□□□ -1.96
CLK1-209ENST00000472679 ZNF233A6NK53 670 aa2.83□□□□□ -1.96
CLK1-209ENST00000472679 GABRR3A8MPY1 467 aa2.83□□□□□ -1.96
CLK1-209ENST00000472679 KRBOX1C9JBD0 128 aa2.83□□□□□ -1.96
CLK1-209ENST00000472679 PLPP1O14494 284 aa2.83□□□□□ -1.96
CLK1-209ENST00000472679 CHST10O43529 356 aa2.83□□□□□ -1.96
CLK1-209ENST00000472679 SLC22A5O76082 557 aa2.83□□□□□ -1.96
CLK1-209ENST00000472679 IGLV3-25P01717 112 aa2.83□□□□□ -1.96
CLK1-209ENST00000472679 CCNG1P51959 295 aa2.83□□□□□ -1.96
CLK1-209ENST00000472679 CCNA1P78396 465 aa2.83□□□□□ -1.96
CLK1-209ENST00000472679 CCDC183Q5T5S1 534 aa2.83□□□□□ -1.96
CLK1-209ENST00000472679 C1orf185Q5T7R7 199 aa2.83□□□□□ -1.96
CLK1-209ENST00000472679 ADNP2Q6IQ32 1131 aa2.83□□□□□ -1.96
CLK1-209ENST00000472679 FAM71AQ8IYT1 594 aa2.83□□□□□ -1.96
CLK1-209ENST00000472679 MIR7-3HGQ8N6C7 128 aa2.83□□□□□ -1.96
CLK1-209ENST00000472679 GPR26Q8NDV2 337 aa2.83□□□□□ -1.96
CLK1-209ENST00000472679 RNF145Q96MT1 663 aa2.83□□□□□ -1.96
CLK1-209ENST00000472679 BEX1Q9HBH7 125 aa2.83□□□□□ -1.96
CLK1-209ENST00000472679 SMIM26A0A096LP01 95 aa2.82□□□□□ -1.96
CLK1-209ENST00000472679 WBP4O75554 376 aaKnown RBP2.82□□□□□ -1.96
CLK1-209ENST00000472679 CSNK2A2P19784 350 aaPredicted RBP2.82□□□□□ -1.96
CLK1-209ENST00000472679 BCKDHBP21953 392 aa2.82□□□□□ -1.96
CLK1-209ENST00000472679 ME2P23368 584 aa2.82□□□□□ -1.96
CLK1-209ENST00000472679 RBM34P42696 430 aaKnown RBP2.82□□□□□ -1.96
CLK1-209ENST00000472679 LIPEQ05469 1076 aa2.82□□□□□ -1.96
CLK1-209ENST00000472679 RBMY1FQ15415 496 aaKnown RBP2.82□□□□□ -1.96
CLK1-209ENST00000472679 PGGHGQ32M88 737 aa2.82□□□□□ -1.96
CLK1-209ENST00000472679 LRRC52Q8N7C0 313 aa2.82□□□□□ -1.96
CLK1-209ENST00000472679 TTLQ8NG68 377 aa2.82□□□□□ -1.96
CLK1-209ENST00000472679 OR9A2Q8NGT5 310 aa2.82□□□□□ -1.96
CLK1-209ENST00000472679 OR5K2Q8NHB8 316 aa2.82□□□□□ -1.96
CLK1-209ENST00000472679 OR51E1Q8TCB6 317 aa2.82□□□□□ -1.96
CLK1-209ENST00000472679 PANX1Q96RD7 426 aa2.82□□□□□ -1.96
CLK1-209ENST00000472679 AGPAT4Q9NRZ5 378 aa2.82□□□□□ -1.96
CLK1-209ENST00000472679 NINLQ9Y2I6 1382 aa2.82□□□□□ -1.96
CLK1-209ENST00000472679 TSPOAP1O95153 1857 aa2.82□□□□□ -1.96
CLK1-209ENST00000472679 HIVEP2P31629 2446 aa2.81□□□□□ -1.96
CLK1-209ENST00000472679 NDUFC2-KCTD14E9PQ53 114 aa2.81□□□□□ -1.96
CLK1-209ENST00000472679 OR2F2O95006 317 aa2.81□□□□□ -1.96
CLK1-209ENST00000472679 MYL2P10916 166 aa2.81□□□□□ -1.96
CLK1-209ENST00000472679 IL1RNP18510 177 aa2.81□□□□□ -1.96
CLK1-209ENST00000472679 CARD17Q5XLA6 110 aa2.81□□□□□ -1.96
CLK1-209ENST00000472679 CBR4Q8N4T8 237 aa2.81□□□□□ -1.96
CLK1-209ENST00000472679 PLIN2Q99541 437 aa2.81□□□□□ -1.96
CLK1-209ENST00000472679 TMEM27Q9HBJ8 222 aa2.81□□□□□ -1.96
CLK1-209ENST00000472679 ZNF160Q9HCG1 818 aa2.81□□□□□ -1.96
CLK1-209ENST00000472679 SLC17A7Q9P2U7 560 aa2.81□□□□□ -1.96
CLK1-209ENST00000472679 ENOPH1Q9UHY7 261 aa2.81□□□□□ -1.96
CLK1-209ENST00000472679 COL22A1Q8NFW1 1626 aaPredicted RBP2.8□□□□□ -1.96
CLK1-209ENST00000472679 PCDH11XQ9BZA7 1347 aa2.8□□□□□ -1.96
CLK1-209ENST00000472679 CENPVL3A0A0U1RRI6 287 aa2.8□□□□□ -1.96
CLK1-209ENST00000472679 AP3B1O00203 1094 aa2.8□□□□□ -1.96
CLK1-209ENST00000472679 SLC9A3R1O14745 358 aaPredicted RBP2.8□□□□□ -1.96
CLK1-209ENST00000472679 CDC40O60508 579 aaKnown RBP eCLIP2.8□□□□□ -1.96
CLK1-209ENST00000472679 HUS1O60921 280 aa2.8□□□□□ -1.96
CLK1-209ENST00000472679 ERLIN1O75477 346 aa2.8□□□□□ -1.96
CLK1-209ENST00000472679 GLSO94925 669 aaPredicted RBP2.8□□□□□ -1.96
CLK1-209ENST00000472679 GTF2E2P29084 291 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms