RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 DRAM2Q6UX65 266 aa16.91■□□□□ 0.3
CHMP2B-204ENST00000472024 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.91■□□□□ 0.3
CHMP2B-204ENST00000472024 AKR7LQ8NHP1 331 aa16.91■□□□□ 0.3
CHMP2B-204ENST00000472024 HSD17B8Q92506 261 aa16.91■□□□□ 0.3
CHMP2B-204ENST00000472024 SPTSSAQ969W0 71 aa16.91■□□□□ 0.3
CHMP2B-204ENST00000472024 DOK1Q99704 481 aa16.91■□□□□ 0.3
CHMP2B-204ENST00000472024 NDUFA13Q9P0J0 144 aa16.91■□□□□ 0.3
CHMP2B-204ENST00000472024 NUFIP1Q9UHK0 495 aaKnown RBP16.91■□□□□ 0.3
CHMP2B-204ENST00000472024 FASNP49327 2511 aaKnown RBP16.9■□□□□ 0.3
CHMP2B-204ENST00000472024 C16orf97H3BN30 126 aa16.9■□□□□ 0.3
CHMP2B-204ENST00000472024 HSMCR30P0CW71 290 aa16.9■□□□□ 0.3
CHMP2B-204ENST00000472024 CD79AP11912 226 aa16.9■□□□□ 0.3
CHMP2B-204ENST00000472024 PPP3CBP16298 524 aa16.9■□□□□ 0.3
CHMP2B-204ENST00000472024 GALP22466 123 aa16.9■□□□□ 0.3
CHMP2B-204ENST00000472024 HOXC12P31275 282 aa16.9■□□□□ 0.3
CHMP2B-204ENST00000472024 GABRA5P31644 462 aa16.9■□□□□ 0.3
CHMP2B-204ENST00000472024 FAM27E3Q08E93 113 aa16.9■□□□□ 0.3
CHMP2B-204ENST00000472024 TSC22D1Q15714 1073 aa16.9■□□□□ 0.3
CHMP2B-204ENST00000472024 ZNF544Q6NX49 715 aa16.9■□□□□ 0.3
CHMP2B-204ENST00000472024 COLCA1Q6ZS62 124 aa16.9■□□□□ 0.3
CHMP2B-204ENST00000472024 SPATC1Q76KD6 591 aa16.9■□□□□ 0.3
CHMP2B-204ENST00000472024 ANKRD13BQ86YJ7 626 aa16.9■□□□□ 0.3
CHMP2B-204ENST00000472024 PRSS35Q8N3Z0 413 aa16.9■□□□□ 0.3
CHMP2B-204ENST00000472024 PRR7Q8TB68 274 aa16.9■□□□□ 0.3
CHMP2B-204ENST00000472024 S100PBPQ96BU1 408 aa16.9■□□□□ 0.3
CHMP2B-204ENST00000472024 POM121L2Q96KW2 1035 aa16.9■□□□□ 0.3
CHMP2B-204ENST00000472024 BCL7BQ9BQE9 202 aa16.9■□□□□ 0.3
CHMP2B-204ENST00000472024 RNF121Q9H920 327 aa16.9■□□□□ 0.3
CHMP2B-204ENST00000472024 FRRS1LQ9P0K9 344 aa16.9■□□□□ 0.3
CHMP2B-204ENST00000472024 TMEM269A0A1B0GVZ9 245 aa16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 DPPA5A6NC42 116 aa16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 TMEM212A6NML5 194 aa16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 M0R135 149 aa16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 ACSM4P0C7M7 580 aa16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 CD36P16671 472 aa16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 CELP19835 753 aa16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 PSMA1P25786 263 aaKnown RBP16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 HSD11B1P28845 292 aa16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 PSMB10P40306 273 aa16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 KIR3DL2P43630 455 aa16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 HTR5AP47898 357 aa16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 PLP2Q04941 152 aa16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 MFGE8Q08431 387 aaPredicted RBP16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 TAF13Q15543 124 aa16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 TRAM1Q15629 374 aa16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 WDR38Q5JTN6 314 aa16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 LIPKQ5VXJ0 399 aa16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 SEZ6L2Q6UXD5 910 aa16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 ZNF808Q8N4W9 903 aaPredicted RBP16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 RNASE6Q93091 150 aaKnown RBP16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 ZNF799Q96GE5 643 aa16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 ACTR6Q9GZN1 396 aa16.89■□□□□ 0.29
CHMP2B-204ENST00000472024 LOC100509620A0A075B734 347 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 LOC110117498-PIK3R3F6TDL0 507 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 J3QW42 95 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 ZNF701M0R085 212 aaPredicted RBP16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 SC5DO75845 299 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 RPP14O95059 124 aaKnown RBP16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 GABARAPO95166 117 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 IGLV3-1P01715 115 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 ISG15P05161 165 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 CX3CR1P49238 355 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 GDI2P50395 445 aaKnown RBP16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 TPTEP56180 551 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 TUBA1BP68363 451 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 SORDQ00796 357 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 TFF3Q07654 80 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 XKRXQ6PP77 449 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 Q6ZSR3 168 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 TUBA1AQ71U36 451 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 ELMOD2Q8IZ81 293 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 MS4A15Q8N5U1 240 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 ZNF420Q8TAQ5 688 aaPredicted RBP16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 FUNDC2Q9BWH2 189 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 C1QTNF5Q9BXJ0 243 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 SP140LQ9H930 580 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 ENPP5Q9UJA9 477 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 OR52A1Q9UKL2 312 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 CEPT1Q9Y6K0 416 aa16.88■□□□□ 0.29
CHMP2B-204ENST00000472024 DIDO1Q9BTC0 2240 aaKnown RBP16.87■□□□□ 0.29
CHMP2B-204ENST00000472024 TRBV2A0A0J9YWF9 115 aa16.87■□□□□ 0.29
CHMP2B-204ENST00000472024 IQCMA0A1B0GVH7 501 aa16.87■□□□□ 0.29
CHMP2B-204ENST00000472024 ZFPL1O95159 310 aa16.87■□□□□ 0.29
CHMP2B-204ENST00000472024 DBHP09172 617 aa16.87■□□□□ 0.29
CHMP2B-204ENST00000472024 STOMP27105 288 aa16.87■□□□□ 0.29
CHMP2B-204ENST00000472024 ZNF121P58317 390 aaPredicted RBP16.87■□□□□ 0.29
CHMP2B-204ENST00000472024 RPS11P62280 158 aaKnown RBP eCLIP16.87■□□□□ 0.29
CHMP2B-204ENST00000472024 HGFACQ04756 655 aa16.87■□□□□ 0.29
CHMP2B-204ENST00000472024 TAB1Q15750 504 aa16.87■□□□□ 0.29
CHMP2B-204ENST00000472024 GDPGP1Q6ZNW5 385 aa16.87■□□□□ 0.29
CHMP2B-204ENST00000472024 SLC16A12Q6ZSM3 486 aa16.87■□□□□ 0.29
CHMP2B-204ENST00000472024 ZFP41Q8N8Y5 198 aa16.87■□□□□ 0.29
CHMP2B-204ENST00000472024 ITLN2Q8WWU7 325 aaPredicted RBP16.87■□□□□ 0.29
CHMP2B-204ENST00000472024 GHSRQ92847 366 aa16.87■□□□□ 0.29
CHMP2B-204ENST00000472024 PBOV1Q9GZY1 135 aa16.87■□□□□ 0.29
CHMP2B-204ENST00000472024 ZNF281Q9Y2X9 895 aa16.87■□□□□ 0.29
CHMP2B-204ENST00000472024 RTTNQ86VV8 2226 aa16.86■□□□□ 0.29
CHMP2B-204ENST00000472024 A0A0U1RQV5 110 aa16.86■□□□□ 0.29
CHMP2B-204ENST00000472024 UBCP0CG48 685 aaKnown RBP16.86■□□□□ 0.29
CHMP2B-204ENST00000472024 CCL1P22362 96 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms