RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ARPC2O15144 300 aa18.95■□□□□ 0.62
C9orf3-213ENST00000471978 RRM2P31350 389 aa18.95■□□□□ 0.62
C9orf3-213ENST00000471978 RSPO1Q2MKA7 263 aaPredicted RBP18.95■□□□□ 0.62
C9orf3-213ENST00000471978 CFAP77Q6ZQR2 320 aa18.95■□□□□ 0.62
C9orf3-213ENST00000471978 LINC00346Q8IVM7 164 aa18.95■□□□□ 0.62
C9orf3-213ENST00000471978 PGAM4Q8N0Y7 254 aa18.95■□□□□ 0.62
C9orf3-213ENST00000471978 MUC20Q8N307 709 aaPredicted RBP18.95■□□□□ 0.62
C9orf3-213ENST00000471978 BHLHE23Q8NDY6 225 aa18.95■□□□□ 0.62
C9orf3-213ENST00000471978 ZNF420Q8TAQ5 688 aaPredicted RBP18.95■□□□□ 0.62
C9orf3-213ENST00000471978 MEGF10Q96KG7 1140 aa18.95■□□□□ 0.62
C9orf3-213ENST00000471978 CDRT15Q96T59 188 aa18.95■□□□□ 0.62
C9orf3-213ENST00000471978 PITX2Q99697 317 aa18.95■□□□□ 0.62
C9orf3-213ENST00000471978 CDADC1Q9BWV3 514 aa18.95■□□□□ 0.62
C9orf3-213ENST00000471978 WDR76Q9H967 626 aa18.95■□□□□ 0.62
C9orf3-213ENST00000471978 F5H0A9 414 aaPredicted RBP18.94■□□□□ 0.62
C9orf3-213ENST00000471978 H0YL77 283 aa18.94■□□□□ 0.62
C9orf3-213ENST00000471978 ATP8B1O43520 1251 aa18.94■□□□□ 0.62
C9orf3-213ENST00000471978 GSSP48637 474 aa18.94■□□□□ 0.62
C9orf3-213ENST00000471978 SRP9P49458 86 aaKnown RBP18.94■□□□□ 0.62
C9orf3-213ENST00000471978 COMPP49747 757 aaPredicted RBP18.94■□□□□ 0.62
C9orf3-213ENST00000471978 ZNF154Q13106 437 aa18.94■□□□□ 0.62
C9orf3-213ENST00000471978 SLC36A3Q495N2 470 aa18.94■□□□□ 0.62
C9orf3-213ENST00000471978 SLC18B1Q6NT16 456 aa18.94■□□□□ 0.62
C9orf3-213ENST00000471978 ZBTB46Q86UZ6 589 aa18.94■□□□□ 0.62
C9orf3-213ENST00000471978 SDR9C7Q8NEX9 313 aa18.94■□□□□ 0.62
C9orf3-213ENST00000471978 OR2AJ1Q8NGZ0 328 aa18.94■□□□□ 0.62
C9orf3-213ENST00000471978 GNPDA2Q8TDQ7 276 aa18.94■□□□□ 0.62
C9orf3-213ENST00000471978 DVL3Q92997 716 aaPredicted RBP18.94■□□□□ 0.62
C9orf3-213ENST00000471978 POP5Q969H6 163 aaKnown RBP18.94■□□□□ 0.62
C9orf3-213ENST00000471978 SLC30A2Q9BRI3 323 aa18.94■□□□□ 0.62
C9orf3-213ENST00000471978 HCAR1Q9BXC0 346 aa18.94■□□□□ 0.62
C9orf3-213ENST00000471978 FN3KQ9H479 309 aa18.94■□□□□ 0.62
C9orf3-213ENST00000471978 IL1RAPQ9NPH3 570 aa18.94■□□□□ 0.62
C9orf3-213ENST00000471978 ESM1Q9NQ30 184 aa18.94■□□□□ 0.62
C9orf3-213ENST00000471978 AUP1Q9Y679 476 aa18.94■□□□□ 0.62
C9orf3-213ENST00000471978 TMEM89A2RUT3 159 aa18.93■□□□□ 0.62
C9orf3-213ENST00000471978 OR6C68A6NDL8 312 aa18.93■□□□□ 0.62
C9orf3-213ENST00000471978 A8MXK9 166 aa18.93■□□□□ 0.62
C9orf3-213ENST00000471978 IQCF6A8MYZ5 107 aa18.93■□□□□ 0.62
C9orf3-213ENST00000471978 F5H5K5 113 aa18.93■□□□□ 0.62
C9orf3-213ENST00000471978 IDH3BO43837 385 aa18.93■□□□□ 0.62
C9orf3-213ENST00000471978 HLA-DQA2P01906 255 aa18.93■□□□□ 0.62
C9orf3-213ENST00000471978 TSPAN31Q12999 210 aa18.93■□□□□ 0.62
C9orf3-213ENST00000471978 ECH1Q13011 328 aa18.93■□□□□ 0.62
C9orf3-213ENST00000471978 KRTAP27-1Q3LI81 207 aa18.93■□□□□ 0.62
C9orf3-213ENST00000471978 ESCO2Q56NI9 601 aa18.93■□□□□ 0.62
C9orf3-213ENST00000471978 ARMCX4Q5H9R4 360 aa18.93■□□□□ 0.62
C9orf3-213ENST00000471978 COLCA1Q6ZS62 124 aa18.93■□□□□ 0.62
C9orf3-213ENST00000471978 C1QTNF5Q9BXJ0 243 aa18.93■□□□□ 0.62
C9orf3-213ENST00000471978 NTN4Q9HB63 628 aa18.93■□□□□ 0.62
C9orf3-213ENST00000471978 TAGLN3Q9UI15 199 aa18.93■□□□□ 0.62
C9orf3-213ENST00000471978 INSIG2Q9Y5U4 225 aa18.93■□□□□ 0.62
C9orf3-213ENST00000471978 IGHV3-64DA0A0J9YX35 117 aa18.92■□□□□ 0.62
C9orf3-213ENST00000471978 CEACAM18A8MTB9 384 aa18.92■□□□□ 0.62
C9orf3-213ENST00000471978 F5H5P2 479 aa18.92■□□□□ 0.62
C9orf3-213ENST00000471978 MLNRO43193 412 aa18.92■□□□□ 0.62
C9orf3-213ENST00000471978 ZNF205O95201 554 aa18.92■□□□□ 0.62
C9orf3-213ENST00000471978 CYB5R3P00387 301 aaPredicted RBP18.92■□□□□ 0.62
C9orf3-213ENST00000471978 ACSM4P0C7M7 580 aa18.92■□□□□ 0.62
C9orf3-213ENST00000471978 SELEP16581 610 aa18.92■□□□□ 0.62
C9orf3-213ENST00000471978 ZNF12P17014 697 aa18.92■□□□□ 0.62
C9orf3-213ENST00000471978 SLC35F1Q5T1Q4 408 aa18.92■□□□□ 0.62
C9orf3-213ENST00000471978 ZNF620Q6ZNG0 422 aa18.92■□□□□ 0.62
C9orf3-213ENST00000471978 ZDHHC21Q8IVQ6 265 aa18.92■□□□□ 0.62
C9orf3-213ENST00000471978 ZDHHC22Q8N966 263 aa18.92■□□□□ 0.62
C9orf3-213ENST00000471978 OR52E2Q8NGJ4 325 aa18.92■□□□□ 0.62
C9orf3-213ENST00000471978 ATF6BQ99941 703 aa18.92■□□□□ 0.62
C9orf3-213ENST00000471978 MRI1Q9BV20 369 aa18.92■□□□□ 0.62
C9orf3-213ENST00000471978 TMEM100Q9NV29 134 aa18.92■□□□□ 0.62
C9orf3-213ENST00000471978 ARL8BQ9NVJ2 186 aa18.92■□□□□ 0.62
C9orf3-213ENST00000471978 OR5V1Q9UGF6 321 aa18.92■□□□□ 0.62
C9orf3-213ENST00000471978 CYB5R1Q9UHQ9 305 aa18.92■□□□□ 0.62
C9orf3-213ENST00000471978 WNT2P09544 360 aa18.91■□□□□ 0.62
C9orf3-213ENST00000471978 GGT2P36268 569 aa18.91■□□□□ 0.62
C9orf3-213ENST00000471978 PRSS12P56730 875 aa18.91■□□□□ 0.62
C9orf3-213ENST00000471978 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.91■□□□□ 0.62
C9orf3-213ENST00000471978 TRAP1Q12931 704 aaKnown RBP18.91■□□□□ 0.62
C9orf3-213ENST00000471978 CLEC12AQ5QGZ9 265 aa18.91■□□□□ 0.62
C9orf3-213ENST00000471978 PGBD2Q6P3X8 592 aa18.91■□□□□ 0.62
C9orf3-213ENST00000471978 MOGAT3Q86VF5 341 aa18.91■□□□□ 0.62
C9orf3-213ENST00000471978 C3orf56Q8N813 242 aa18.91■□□□□ 0.62
C9orf3-213ENST00000471978 TMEM165Q9HC07 324 aa18.91■□□□□ 0.62
C9orf3-213ENST00000471978 NUP50Q9UKX7 468 aa18.91■□□□□ 0.62
C9orf3-213ENST00000471978 LRCH1Q9Y2L9 728 aa18.91■□□□□ 0.62
C9orf3-213ENST00000471978 LRRC30A6NM36 301 aa18.9■□□□□ 0.62
C9orf3-213ENST00000471978 LCATP04180 440 aa18.9■□□□□ 0.62
C9orf3-213ENST00000471978 HLA-DPB1P04440 258 aa18.9■□□□□ 0.62
C9orf3-213ENST00000471978 RPS2P15880 293 aaKnown RBP18.9■□□□□ 0.62
C9orf3-213ENST00000471978 MALLQ13021 153 aa18.9■□□□□ 0.62
C9orf3-213ENST00000471978 GK2Q14410 553 aaPredicted RBP18.9■□□□□ 0.62
C9orf3-213ENST00000471978 C16orf89Q6UX73 402 aa18.9■□□□□ 0.62
C9orf3-213ENST00000471978 RBMS3Q6XE24 437 aaKnown RBP18.9■□□□□ 0.62
C9orf3-213ENST00000471978 NAA40Q86UY6 237 aa18.9■□□□□ 0.62
C9orf3-213ENST00000471978 DEFB107AQ8IZN7 70 aa18.9■□□□□ 0.62
C9orf3-213ENST00000471978 SIGLECL1Q8N7X8 197 aa18.9■□□□□ 0.62
C9orf3-213ENST00000471978 EGLN3Q9H6Z9 239 aa18.9■□□□□ 0.62
C9orf3-213ENST00000471978 PNRC2Q9NPJ4 139 aaKnown RBP18.9■□□□□ 0.62
C9orf3-213ENST00000471978 DDX28Q9NUL7 540 aaKnown RBP18.9■□□□□ 0.62
C9orf3-213ENST00000471978 MRPL22Q9NWU5 206 aaKnown RBP18.9■□□□□ 0.62
C9orf3-213ENST00000471978 PPIAL4AQ9Y536 164 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms