RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 NKPD1Q17RQ9 610 aa16.9■□□□□ 0.3
HDAC7-220ENST00000471235 CLEC12BQ2HXU8 276 aa16.9■□□□□ 0.3
HDAC7-220ENST00000471235 DNM1P46Q6ZS02 220 aa16.9■□□□□ 0.3
HDAC7-220ENST00000471235 COLCA1Q6ZS62 124 aa16.9■□□□□ 0.3
HDAC7-220ENST00000471235 MEPCEQ7L2J0 689 aaKnown RBP16.9■□□□□ 0.3
HDAC7-220ENST00000471235 GID4Q8IVV7 300 aa16.9■□□□□ 0.3
HDAC7-220ENST00000471235 OTOSQ8NHW6 89 aa16.9■□□□□ 0.3
HDAC7-220ENST00000471235 RNF133Q8WVZ7 376 aa16.9■□□□□ 0.3
HDAC7-220ENST00000471235 GTF3AQ92664 365 aaKnown RBP16.9■□□□□ 0.3
HDAC7-220ENST00000471235 SPTSSAQ969W0 71 aa16.9■□□□□ 0.3
HDAC7-220ENST00000471235 APOBEC3DQ96AK3 386 aaPredicted RBP16.9■□□□□ 0.3
HDAC7-220ENST00000471235 ZNF799Q96GE5 643 aa16.9■□□□□ 0.3
HDAC7-220ENST00000471235 COG8Q96MW5 612 aa16.9■□□□□ 0.3
HDAC7-220ENST00000471235 C1QTNF5Q9BXJ0 243 aa16.9■□□□□ 0.3
HDAC7-220ENST00000471235 RAB1BQ9H0U4 201 aa16.9■□□□□ 0.3
HDAC7-220ENST00000471235 CENPMQ9NSP4 180 aa16.9■□□□□ 0.3
HDAC7-220ENST00000471235 SLCO1C1Q9NYB5 712 aa16.9■□□□□ 0.3
HDAC7-220ENST00000471235 PTTG3PQ9NZH4 202 aa16.9■□□□□ 0.3
HDAC7-220ENST00000471235 HIVEP1P15822 2718 aa16.9■□□□□ 0.3
HDAC7-220ENST00000471235 ZNF469Q96JG9 3925 aaPredicted RBP16.9■□□□□ 0.3
HDAC7-220ENST00000471235 NAT2P11245 290 aa16.89■□□□□ 0.29
HDAC7-220ENST00000471235 TUBG1P23258 451 aa16.89■□□□□ 0.29
HDAC7-220ENST00000471235 PEX2P28328 305 aa16.89■□□□□ 0.29
HDAC7-220ENST00000471235 TPTEP56180 551 aa16.89■□□□□ 0.29
HDAC7-220ENST00000471235 CDC42P60953 191 aa16.89■□□□□ 0.29
HDAC7-220ENST00000471235 LPCAT4Q643R3 524 aa16.89■□□□□ 0.29
HDAC7-220ENST00000471235 SLC16A9Q7RTY1 509 aa16.89■□□□□ 0.29
HDAC7-220ENST00000471235 NAA40Q86UY6 237 aa16.89■□□□□ 0.29
HDAC7-220ENST00000471235 ZNF454Q8N9F8 522 aa16.89■□□□□ 0.29
HDAC7-220ENST00000471235 OR8J1Q8NGP2 316 aa16.89■□□□□ 0.29
HDAC7-220ENST00000471235 TUBG2Q9NRH3 451 aa16.89■□□□□ 0.29
HDAC7-220ENST00000471235 IMPAD1Q9NX62 359 aa16.89■□□□□ 0.29
HDAC7-220ENST00000471235 DNAJC27Q9NZQ0 273 aa16.89■□□□□ 0.29
HDAC7-220ENST00000471235 TRIM64A6NGJ6 449 aa16.88■□□□□ 0.29
HDAC7-220ENST00000471235 TRIM64BA6NI03 449 aa16.88■□□□□ 0.29
HDAC7-220ENST00000471235 SLC22A31A6NKX4 558 aa16.88■□□□□ 0.29
HDAC7-220ENST00000471235 F12P00748 615 aaPredicted RBP16.88■□□□□ 0.29
HDAC7-220ENST00000471235 LYNP07948 512 aa16.88■□□□□ 0.29
HDAC7-220ENST00000471235 ANOS1P23352 680 aa16.88■□□□□ 0.29
HDAC7-220ENST00000471235 PRKXP51817 358 aa16.88■□□□□ 0.29
HDAC7-220ENST00000471235 GRB2P62993 217 aaKnown RBP16.88■□□□□ 0.29
HDAC7-220ENST00000471235 TAF13Q15543 124 aa16.88■□□□□ 0.29
HDAC7-220ENST00000471235 ZNF525Q8N782 197 aa16.88■□□□□ 0.29
HDAC7-220ENST00000471235 SNX33Q8WV41 574 aa16.88■□□□□ 0.29
HDAC7-220ENST00000471235 CNN2Q99439 309 aaKnown RBP16.88■□□□□ 0.29
HDAC7-220ENST00000471235 KCNJ15Q99712 375 aa16.88■□□□□ 0.29
HDAC7-220ENST00000471235 YIPF3Q9GZM5 350 aa16.88■□□□□ 0.29
HDAC7-220ENST00000471235 MS4A5Q9H3V2 200 aa16.88■□□□□ 0.29
HDAC7-220ENST00000471235 H2AFY2Q9P0M6 372 aaPredicted RBP16.88■□□□□ 0.29
HDAC7-220ENST00000471235 GPR160Q9UJ42 338 aa16.88■□□□□ 0.29
HDAC7-220ENST00000471235 DLGAP1O14490 977 aa16.87■□□□□ 0.29
HDAC7-220ENST00000471235 LCATP04180 440 aa16.87■□□□□ 0.29
HDAC7-220ENST00000471235 ERCC1P07992 297 aaPredicted RBP16.87■□□□□ 0.29
HDAC7-220ENST00000471235 OPRL1P41146 370 aa16.87■□□□□ 0.29
HDAC7-220ENST00000471235 SLC6A9P48067 706 aa16.87■□□□□ 0.29
HDAC7-220ENST00000471235 MMP15P51511 669 aa16.87■□□□□ 0.29
HDAC7-220ENST00000471235 PSG7Q13046 419 aa16.87■□□□□ 0.29
HDAC7-220ENST00000471235 LRRC36Q1X8D7 754 aa16.87■□□□□ 0.29
HDAC7-220ENST00000471235 DRAM2Q6UX65 266 aa16.87■□□□□ 0.29
HDAC7-220ENST00000471235 OR5L1Q8NGL2 311 aa16.87■□□□□ 0.29
HDAC7-220ENST00000471235 THEM6Q8WUY1 208 aa16.87■□□□□ 0.29
HDAC7-220ENST00000471235 NEU4Q8WWR8 484 aaPredicted RBP16.87■□□□□ 0.29
HDAC7-220ENST00000471235 UBE2FQ969M7 185 aa16.87■□□□□ 0.29
HDAC7-220ENST00000471235 ZNF582Q96NG8 517 aaPredicted RBP16.87■□□□□ 0.29
HDAC7-220ENST00000471235 TMUB1Q9BVT8 246 aa16.87■□□□□ 0.29
HDAC7-220ENST00000471235 ADGRL4Q9HBW9 690 aa16.87■□□□□ 0.29
HDAC7-220ENST00000471235 SMPD3Q9NY59 655 aaPredicted RBP16.87■□□□□ 0.29
HDAC7-220ENST00000471235 PURGQ9UJV8 347 aaKnown RBP16.87■□□□□ 0.29
HDAC7-220ENST00000471235 GMPPBQ9Y5P6 360 aa16.87■□□□□ 0.29
HDAC7-220ENST00000471235 C17orf100A8MU93 164 aa16.86■□□□□ 0.29
HDAC7-220ENST00000471235 TIMM8AO60220 97 aaPredicted RBP16.86■□□□□ 0.29
HDAC7-220ENST00000471235 ALOX5APP20292 161 aa16.86■□□□□ 0.29
HDAC7-220ENST00000471235 KITLGP21583 273 aa16.86■□□□□ 0.29
HDAC7-220ENST00000471235 CX3CR1P49238 355 aa16.86■□□□□ 0.29
HDAC7-220ENST00000471235 HCCSP53701 268 aa16.86■□□□□ 0.29
HDAC7-220ENST00000471235 HLXQ14774 488 aaPredicted RBP16.86■□□□□ 0.29
HDAC7-220ENST00000471235 MOGQ16653 247 aa16.86■□□□□ 0.29
HDAC7-220ENST00000471235 SNAI3Q3KNW1 292 aa16.86■□□□□ 0.29
HDAC7-220ENST00000471235 CLEC2AQ6UVW9 174 aa16.86■□□□□ 0.29
HDAC7-220ENST00000471235 FBXW12Q6X9E4 464 aa16.86■□□□□ 0.29
HDAC7-220ENST00000471235 GALNT4Q8N4A0 578 aa16.86■□□□□ 0.29
HDAC7-220ENST00000471235 ZNF283Q8N7M2 679 aa16.86■□□□□ 0.29
HDAC7-220ENST00000471235 CMBLQ96DG6 245 aa16.86■□□□□ 0.29
HDAC7-220ENST00000471235 RDH12Q96NR8 316 aa16.86■□□□□ 0.29
HDAC7-220ENST00000471235 DLL4Q9NR61 685 aa16.86■□□□□ 0.29
HDAC7-220ENST00000471235 HAO2Q9NYQ3 351 aa16.86■□□□□ 0.29
HDAC7-220ENST00000471235 WARS2Q9UGM6 360 aaKnown RBP16.86■□□□□ 0.29
HDAC7-220ENST00000471235 LAMP5Q9UJQ1 280 aa16.86■□□□□ 0.29
HDAC7-220ENST00000471235 COPS3Q9UNS2 423 aa16.86■□□□□ 0.29
HDAC7-220ENST00000471235 C5orf63A6NC05 138 aa16.85■□□□□ 0.29
HDAC7-220ENST00000471235 ZSCAN5BA6NJL1 495 aa16.85■□□□□ 0.29
HDAC7-220ENST00000471235 CASQ2O14958 399 aaPredicted RBP16.85■□□□□ 0.29
HDAC7-220ENST00000471235 NCR1O76036 304 aa16.85■□□□□ 0.29
HDAC7-220ENST00000471235 CSF3P09919 207 aa16.85■□□□□ 0.29
HDAC7-220ENST00000471235 H2BFMP0C1H6 154 aa16.85■□□□□ 0.29
HDAC7-220ENST00000471235 SLC2A1P11166 492 aa16.85■□□□□ 0.29
HDAC7-220ENST00000471235 RAC2P15153 192 aa16.85■□□□□ 0.29
HDAC7-220ENST00000471235 HSD11B1P28845 292 aa16.85■□□□□ 0.29
HDAC7-220ENST00000471235 HTR1FP30939 366 aa16.85■□□□□ 0.29
HDAC7-220ENST00000471235 SLC15A1P46059 708 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms