RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 DEGS2Q6QHC5 323 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 IZUMO2Q6UXV1 221 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 COLCA1Q6ZS62 124 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 RFPL4BQ6ZWI9 263 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 C8orf59Q8N0T1 100 aaPredicted RBP12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 MUC15Q8N387 334 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 OR51G2Q8NGK0 314 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 FBLIM1Q8WUP2 373 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 ASB17Q8WXJ9 295 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 SLC7A6Q92536 515 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 COG8Q96MW5 612 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 AMELYQ99218 206 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 COPS4Q9BT78 406 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 ST6GALNAC2Q9UJ37 374 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 KLHDC2Q9Y2U9 406 aa12.86□□□□□ -0.35
CDC42SE1-203ENST00000470278 VSTM5A8MXK1 200 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 J3QRE1 110 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 M0R135 149 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 ATE1O95260 518 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 DBHP09172 617 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 OR2T7P0C7T2 308 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 FAM157BP0CG42 384 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 DBTP11182 482 aaKnown RBP12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 THBS4P35443 961 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 EVX1P49640 407 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 TPTEP56180 551 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 ACTC1P68032 377 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 ACTA1P68133 377 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 ZNF91Q05481 1191 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 AGAP6Q5VW22 663 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 C11orf71Q6IPW1 123 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 KCTD18Q6PI47 426 aaPredicted RBP12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 DRAM2Q6UX65 266 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 TGIF2LYQ8IUE0 185 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 SLC35F2Q8IXU6 374 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 FBXL14Q8N1E6 418 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 OR2T27Q8NH04 317 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 MRPL24Q96A35 216 aaKnown RBP12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 APOBEC3DQ96AK3 386 aaPredicted RBP12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 RNFT2Q96EX2 444 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 ZNF799Q96GE5 643 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 KCNJ15Q99712 375 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 FOXC2Q99958 501 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 TRAF4Q9BUZ4 470 aaPredicted RBP12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 C1QTNF5Q9BXJ0 243 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 NIPAL2Q9H841 368 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 MRPS18AQ9NVS2 196 aaKnown RBP12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 CMAHPQ9Y471 501 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 FBN3Q75N90 2809 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 RTTNQ86VV8 2226 aa12.85□□□□□ -0.35
CDC42SE1-203ENST00000470278 IGLV3-9A0A075B6K5 115 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 APOC1P02654 83 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 SOD3P08294 240 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 OR4A8P0C604 315 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 ZNF250P15622 560 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 CD53P19397 219 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 SERPINF1P36955 418 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 FABP6P51161 128 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 PPP1CBP62140 327 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 EGR3Q06889 387 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 RAB40BQ12829 278 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 RGS7BPQ6MZT1 257 aaPredicted RBP12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 VHLLQ6RSH7 139 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 OR1J1Q8NGS3 322 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 ABHD4Q8TB40 342 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 THEM6Q8WUY1 208 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 PIGTQ969N2 578 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 MBD6Q96DN6 1003 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 DOK1Q99704 481 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 CCL19Q99731 98 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 ANKRD60Q9BZ19 345 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 RASSF4Q9H2L5 321 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 GSX1Q9H4S2 264 aaPredicted RBP12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 CBLN4Q9NTU7 201 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 AASSQ9UDR5 926 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 FBXO9Q9UK97 447 aaPredicted RBP12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 COPS3Q9UNS2 423 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 EXOGQ9Y2C4 368 aaKnown RBP12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 GRIP1Q9Y3R0 1128 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 RPL36Q9Y3U8 105 aaKnown RBP12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 PCDHGB1Q9Y5G3 927 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 DSCAMO60469 2012 aa12.84□□□□□ -0.35
CDC42SE1-203ENST00000470278 ARID1AO14497 2285 aa12.83□□□□□ -0.35
CDC42SE1-203ENST00000470278 B9A039 149 aa12.83□□□□□ -0.36
CDC42SE1-203ENST00000470278 ZNF670-ZNF695F2Z2N8 137 aa12.83□□□□□ -0.36
CDC42SE1-203ENST00000470278 F5H5K5 113 aa12.83□□□□□ -0.36
CDC42SE1-203ENST00000470278 ZNF254O75437 659 aa12.83□□□□□ -0.36
CDC42SE1-203ENST00000470278 NGFP01138 241 aa12.83□□□□□ -0.36
CDC42SE1-203ENST00000470278 HSD11B1P28845 292 aa12.83□□□□□ -0.36
CDC42SE1-203ENST00000470278 DCTDP32321 178 aa12.83□□□□□ -0.36
CDC42SE1-203ENST00000470278 ATP6V1E1P36543 226 aa12.83□□□□□ -0.36
CDC42SE1-203ENST00000470278 CXCR4P61073 352 aa12.83□□□□□ -0.36
CDC42SE1-203ENST00000470278 TAF13Q15543 124 aa12.83□□□□□ -0.36
CDC42SE1-203ENST00000470278 MSMPQ1L6U9 139 aa12.83□□□□□ -0.36
CDC42SE1-203ENST00000470278 SWI5Q1ZZU3 235 aa12.83□□□□□ -0.36
CDC42SE1-203ENST00000470278 MST1LQ2TV78 715 aa12.83□□□□□ -0.36
CDC42SE1-203ENST00000470278 C6orf52Q5T4I8 152 aa12.83□□□□□ -0.36
CDC42SE1-203ENST00000470278 MBNL2Q5VZF2 373 aaKnown RBP12.83□□□□□ -0.36
CDC42SE1-203ENST00000470278 ZNF322Q6U7Q0 402 aaPredicted RBP12.83□□□□□ -0.36
CDC42SE1-203ENST00000470278 THAP5Q7Z6K1 395 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms